Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d045014_circ_g.1 |
ID in PlantcircBase | zma_circ_009841 |
Alias | zma_circ_0003030, GRMZM2G053170_C1 |
Organism | Zea mays |
Position | chr9: 10221142-10221542 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | find_circ, CIRI2 |
Parent gene | Zm00001d045014 |
Parent gene annotation |
chloroplast RNA splicing4 |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | NA |
Tissues | leaf, root |
Exon boundary | No-Yes |
Splicing signals | CT-AC |
Number of exons covered | Zm00001d045014_T008:1 Zm00001d045014_T010:1 Zm00001d045014_T005:1 Zm00001d045014_T020:1 Zm00001d045014_T023:1 Zm00001d045014_T001:1 Zm00001d045014_T006:1 Zm00001d045014_T017:1 Zm00001d045014_T012:1 Zm00001d045014_T014:1 Zm00001d045014_T021:1 Zm00001d045014_T027:1 Zm00001d045014_T016:1 Zm00001d045014_T025:1 Zm00001d045014_T003:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.154358611 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | responsive to drought stress |
Other Information | |
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References | Ma et al., 2021b;Zhang et al., 2019 |