Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d025003_circ_g.2 |
ID in PlantcircBase | zma_circ_003178 |
Alias | circ1497 |
Organism | Zea mays |
Position | chr10: 99123961-99131493 JBrowse» |
Reference genome | AGPv4.38 |
Type | ei-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d025003 |
Parent gene annotation |
Putative glycosyl transferase family 28 protein |
Parent gene strand | + |
Alternative splicing | Zm00001d025003_circ_g.1 Zm00001d025003_circ_g.3 Zm00001d025003_circ_g.4 |
Support reads | 5 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d025003_T004:6 Zm00001d025003_T002:6 Zm00001d025003_T001:6 Zm00001d025003_T003:5 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.016143804 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |