Plant Circular RNA Database

Detail information of Zm00001d028417_circ_g.1

			
						 General Information
					
						CircRNA Name
						Zm00001d028417_circ_g.1
					
						ID in PlantcircBase
						zma_circ_006459
					
						Alias
						zma_circ_0000612
					
						Organism
						
							Zea mays						
					
						Position
						
							chr1: 34218395-34222616  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Zm00001d028417						
					
						Parent gene annotation
						
							Autophagy protein 9  
							
						Parent gene strand
						-
					
						Alternative splicing
						
							NA						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d028417_T009:8
Zm00001d028417_T004:8
Zm00001d028417_T001:7
Zm00001d028417_T005:6
Zm00001d028417_T002:8
Zm00001d028417_T003:8

General Information
CircRNA Name	Zm00001d028417_circ_g.1
ID in PlantcircBase	zma_circ_006459
Alias	zma_circ_0000612
Organism	Zea mays
Position	chr1: 34218395-34222616 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	find_circ
Parent gene	Zm00001d028417
Parent gene annotation	Autophagy protein 9
Parent gene strand	-
Alternative splicing	NA
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d028417_T009:8 Zm00001d028417_T004:8 Zm00001d028417_T001:7 Zm00001d028417_T005:6 Zm00001d028417_T002:8 Zm00001d028417_T003:8

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CTTGTTTGTGCATGTGCGTCCTTCGAACGGAAGGACATCATTCATGAAAAGAGAAAGCAGGGCC
AGTTGATAGGTCCCTTGCCATGCCAGACGTACACACcttaagaatgatttctccatcttccctt
gggagctcctgagacctttaagagcattgaatggtgacccatagtttctatttccatgtttttt
gaagttaa

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1912
Transcript exons: 34218395-34218666,34218746-34218823,34219573-34219779,34
220252-34220431,34220612-34220834,34221573-34221890,3422
1983-34222616
CTTAAGAATGATTTCTCCATCTTCCCTTGGGAGCTCCTGAGACCTTTAAGAGCATTGAATGGTG
ACCCATAGTTTCTATTTCCATGTTTTTTGAAGTTAAACAAGCTTAGACTATTGAAACATAAAGA
AATAAATGTGTTAAGTGTTGCATAGGCCAAACAAAAATAAGAGCTAAATAGCAGAAGAAACAGC
AGCAAAGACCTGCATACATCTCCCACTCCGTCTACATATATTGTGAAGTCTGAGATGAAGCGCA
GAATGTCATCAACTCGCTTAGGTACCTCAGAAATAAGCAAGTAAGGAGTGATGAAAATGGAGGC
CATCTCTTCAAGTAGCATGATTATAGTATACGGAAATAATGTCTCAAATTCTCTTCGTACAAGT
TCGCTGTTCTCTTTACCACGCCATCGCTTTGGCATGTAATGTGTTTGGTGAACAGCGAGGCACA
TGGCCCCTTCTGGGTCAAAAACTTGAAGCTCATCGGCCACTACTTTTCGACTTATAGCTGCTAT
TGTTCCAAAAACAATAGTATACCAGAGAAGATTTCTTCCAAAAATATGTCCTTCAAGAATAGAT
TCACCCACAAATCCAATGATTATTAGAGCACCAGCCAAGCCACCAGAAACAAAAGATACAAATT
TAGCCATGATGGAAACCAGTGGGGTTGGAAATTGCTTCAAGTAATTTAAAGAATGAACAGCGCT
GTTGTTCATTCTGTGTCTAAAGAAGTGATCAACCTCGTTATATTCCCTAAAGATCCACCTTGAT
AAGTTTGACCACCGTCTAGATGATGCTGTACTAGGGTGATTATAAATTTCTTCAGCATGCCTTA
GAATGACGTACACCAATGGAAATATCACAAGGCAGGGTGATAGGATAAGCATTGCAATGCCAAC
AAATATAAGTCGCTTTCTCAACACATCTGGGCTTGTCAAAAACTCTTTCCTTACACAAAATTTA
CTATCGAACATACTTTGAAAGATGCACCAGTTTAAGGTCCATTCAAGGGACTTTGGAAGTATCA
GATAGTTTCTCCTGCCATGCTCATGTGATCCAGTTGGGCCAGCCCCAGGCACACAAGAATGAAT
TGGAAAAGAAAGAATGCCTTTATTGACCATCCCAATCAAATAATTTTCTTTCCTCATGATTCTC
ATGATAATATCATGCTCTGAGAGATCCCTAACAACACATAGTTTTTGAGATTTCTGGAGCAGGA
CAACTTTCTCAATTATTTTGGGCCATGATATAGTTTGAATCTCAAGATCATTGACCTTAAGTCT
GTCATAGTAGAACTGACGAACATTGAGTGTACTTCTTAACTGTACAAAGAACTTGAGAAAGTTG
GTAAGTCCATAAGCTGTCATTATGACCATTGATCCAACAGTTATCATTTTGGGCAATGTGAAGG
GAACTAATGGATCATGCTTAATGGCCTTCATAAGATCACATGGTTTCTCCCCAGACTCAAGTGC
CTCCACACCGCATTTCAAATGAATAAGAGTATCCCAATCAACAAATAAGAAAAAGAACCCGATA
CAGCATACCATAAAAAGTACATTGAGGATCTCTATTATCCATTTGGTAATGATACACCTGAGCC
CTTTTGCGCAGAAATATTCGTAAAGCCTTTCAAAGAAAATGTCCAGATCAGGGATAGGTTCTTC
CTTGACGCCTTCGTCATGGAGAAGTCCAGATGGGCTCTCGCTTCGAGAACTTGGCAATCTCCGG
TAGTCGGACAACTCTATTTCAGGTGGAATATCAACAAGCAGCTGCGCTGATAACGGCGATTGGC
TTCTCCATGGCCAGTTAAGTCTTGTTTGTGCATGTGCGTCCTTCGAACGGAAGGACATCATTCA
TGAAAAGAGAAAGCAGGGCCAGTTGATAGGTCCCTTGCCATGCCAGACGTACACAC
						
					

						Genomic sequence
						
							CTTAAGAATGATTTCTCCATCTTCCCTTGGGAGCTCCTGAGACCTTTAAGAGCATTGAATGGTG
ACCCATAGTTTCTATTTCCATGTTTTTTGAAGTTAAACAAGCTTAGACTATTGAAACATAAAGA
AATAAATGTGTTAAGTGTTGCATAGGCCAAACAAAAATAAGAGCTAAATAGCAGAAGAAACAGC
AGCAAAGACCTGCATACATCTCCCACTCCGTCTACATATATTGTGAAGTCTGAGATGAAGCGCA
GAATGTCATCAACTCGCTAGAGATAATAAGAATTCAGAACTATCAATAAACTTGGATTACATGA
AAATCAGTGTTGAGTTAGTTCAGAACATTACCTTAGGTACCTCAGAAATAAGCAAGTAAGGAGT
GATGAAAATGGAGGCCATCTCTTCAAGTAGCATGATTATAGTATACTGCATGCACAGATTGTCA
AGTCAATTTTTATTGCCATATAATTGAAGCAGCAAACCCCATAGCTGATTGGCTTATACCCCAG
ATGTAATCATAAGCTGTAAAGCAGAACCATGGTCAAGGTTTTAATGCAACTATGCTAGAGAAAT
ATTCCTATGAATCTATAAAGCTACCCAAAACAGTTTCTAGGATAGATCCAAACTACCATTTCTC
CAATATTACTTAAGTTCGAACGATAAAAAATACCCCCTCCATTCATTTTTATAAGGCACGTTTT
TTTATTTTAAAAAAAAATATTTATAAGGATATTTTGACAGTTCATATCTCTTTATAGTCATTTA
TTACTAAATCAACATCACATTAAAAGTACTTTGAAGAACAGTCTAGTTTTATAATTTTTTAACA
ATGAACTTCCATATAATTAGAATAAATCATTGGTTAAAAGTTAGGAAATCTGACTTTTCCCAAT
AAAAAAATACGCCTTACAAATTGAATAGAAGGGGTAGTAGAAAATAAGTTGACAACAAATTCTT
TTAGTACTGCAATGGAATGGGGAGTTTCGGAAAGGGGTCAATTAATACAAAGAAAATGGATGGA
TTAGAATTTATACATTCATCTTAAAGCTAGACGGTATCGCTTGCACACGAAAATCTTTTAATAT
CTTGACAAGTTGGTAAAATATGGTATACACAGAATTCTGGGCCAGCTAAGCTTATCTTAAATGA
ACTTAAACTAGAGCTCAATTAGTTACCGGAAATAATGTCTCAAATTCTCTTCGTACAAGTTCGC
TGTTCTCTTTACCACGCCATCGCTTTGGCATGTAATGTGTTTGGTGAACAGCGAGGCACATGGC
CCCTTCTGGGTCAAAAACTTGAAGCTCATCGGCCACTACTTTTCGACTTATAGCTGCTATTGTT
CCAAAAACAATAGTATACCAGAGAAGATTTCTTCCAAAAATCTGCAAAAATAACAGCCACATCA
AGTTATGGAGACCTCCACAAGTCATTTCAAGTTGCAGACATGCCACGAAATAGTTGAATTTACA
ATCCCCACAAATTTAATCCATATGCATAATTCTAACCTGATGCAAGTTGTGACCTCAAGTGTTT
GGTGTTTGTTGCCAGCATGAAAAGTTGTGACCTCAAGTGTTTTGTGACCTCAAGTCCACTGGAT
CAAATGTGTTCACCTAATATGTTGTCAAACCCTCCCAAACCACCCTCTCCTTCCTATAGTGGGC
AACTATATGGATCACTCTAAGCTCACATCAAGGCAAATATGCGGATCCCATAAAGTAAGACTTA
GCACTGGGACAACACTAGTAGGCGATGAATACAGCTATTCCAATAGCAAGCAGGTATTTGCATC
TTGGAGTGACTTATAGCAGGTATTTGCAATTTAACCAAAGAAACAATGCAAAATAAAGTGCTTA
CATGTCCTTCAAGAATAGATTCACCCACAAATCCAATGATTATTAGAGCACCAGCCAAGCCACC
AGAAACAAAAGATACAAATTTAGCCATGATGGAAACCAGTGGGGTTGGAAATTGCTTCAAGTAA
TTTAAAGAATGAACAGCGCTGTTGTTCATTCTGTGTCTAAAGAAGTGATCAACCTGCAATGTTT
GCAATCAGTTAGCCTTATATCAGTCAAACAATACTTGCACATACTAACTATGGGATTGATTAGC
AACAGAACTAAGATACGGAAAGCTGGAGAGCTCAAAGATTCATTTAGAAAATGTTACAGCTGCA
ATAGAAGAAAAAAATAATGATGAGTTCTTAGGAGAAGCTACCTCGTTATATTCCCTAAAGATCC
ACCTTGATAAGTTTGACCACCGTCTAGATGATGCTGTACTAGGGTGATTATAAATTTCTTCAGC
ATGCCTTAGAATGACGTACACCAATGGAAATATCACAAGGCAGGGTGATAGGATAAGCATTGCA
ATGCCAACAAATATAAGTCGCTTTCTCAACACATCTGGGCTTGTCAAAAACTCTTTCCTTACAC
AAAATTTACTGAAAAAGGAGAATGAACATTTTGTAATAGAATACACAATGAAGAGGAAGAAAAC
CCTAGTGAAATAAATTATTAGTAAACACTAAACAGAATGATTTGAACCATGCTGAAGCGATGCA
TGAATGCAGGGTAGAAAGAAATCTGGTATACACATTGGAAGTTGGGGAAGTCTAGATTGTAATG
AGTAACCTTCACATGATCTGTTGCATGAGCTTCAGATGGACATGAAGAACTAGGATTCATCATA
AATGATTTGTTCTATATGCATAGGCTATTTAAGCTAACAAGGTAATATGACACAACGCATCTGG
TCAGCTTGAAAATGTATTAGTACAGATTGTGTTAGCACTTAGAGATCGGTATGCGAGTACCGAG
TATACACACTGTAGTACGTGTTATGACAGAAGTTCTGTTCTATACAAAGTGTCACCAGTATTAA
GTAAATACAAAATAAGTAAAATAATAAGGATTGGTATTGACAGATAGTGGATTTATTTCAGACT
TCTAAAGTTCTGATGCAGCCAGTTCTGAAGCAGCAGCCTAACAGCTAATGCCTTCTTAAAGGCC
TAGTTCCGCTTTTTTCCCATAAACGGCCTAGTTGCTCTGGGCTGAGCTAGAAAGAGTAGCATGT
AAAAACAACACATAGCTTGGTCATGTAGAGGCTAAAGCAATTTAACAAACTATATTTTACAAAA
AAAAAAGATCCAATGGAAGTAAGCAGTTACAGACTTCCTTACCTATCGAACATACTTTGAAAGA
TGCACCAGTTTAAGGTCCATTCAAGGGACTTTGGAAGTATCAGATAGTTTCTCCTGCCATGCTC
ATGTGATCCAGTTGGGCCAGCCCCAGGCACACAAGAATGAATTGGAAAAGAAAGAATGCCTTTA
TTGACCATCCCAATCAAATAATTTTCTTTCCTCATGATTCTCATGATAATATCATGCTCTGAGA
GATCCCTAACAACACATAGTTTTTGAGATTTCTGGAGCAGGACAACTTTCTCAATTATTTTGGG
CCATGATATAGTTTGAATCTCAAGATCATTGACCTTAAGTCTGCATAAAGGTAAACAGAATAAG
GGCAAAGTCATTGCTCTGAGCTACAAAGAAAAAAGATTAAGCATGAAAAACATAGGCAGAAAAG
TTACCTGTCATAGTAGAACTGACGAACATTGAGTGTACTTCTTAACTGTACAAAGAACTTGAGA
AAGTTGGTAAGTCCATAAGCTGTCATTATGACCATTGATCCAACAGTTATCATTTTGGGCAATG
TGAAGGGAACTAATGGATCATGCTTAATGGCCTTCATAAGATCACATGGTTTCTCCCCAGACTC
AAGTGCCTCCACACCGCATTTCAAATGAATAAGAGTATCCCAATCAACAAATAAGAAAAAGAAC
CCGATACAGCATACCATAAAAAGTACATTGAGGATCTCTATTATCCATTTGGTAATGATACACC
TGAGCCCTTTTGCGCAGAAATATTCGTAAAGCCTTTCAAAGAAAATGTCCAGATCAGGGATAGG
TTCTTCCTTGACGCCTTCGTCATGGAGAAGTCCAGATGGGCTCTCGCTTCGAGAACTTGGCAAT
CTCCGGTAGTCGGACAACTCTATTTCAGGTGGAATATCAACAAGCAGCTGCGCTGATAACGGCG
ATTGGCTTCTCCATGGCCAGTTAAGTCTTGTTTGTGCATGTGCGTCCTTCGAACGGAAGGACAT
CATTCATGAAAAGAGAAAGCAGGGCCAGTTGATAGGTCCCTTGCCATGCCAGACGTACACAC
						
					

			
		

Sequences
Splice junction sequence	CTTGTTTGTGCATGTGCGTCCTTCGAACGGAAGGACATCATTCATGAAAAGAGAAAGCAGGGCC AGTTGATAGGTCCCTTGCCATGCCAGACGTACACACcttaagaatgatttctccatcttccctt gggagctcctgagacctttaagagcattgaatggtgacccatagtttctatttccatgtttttt gaagttaa
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1912 Transcript exons: 34218395-34218666,34218746-34218823,34219573-34219779,34 220252-34220431,34220612-34220834,34221573-34221890,3422 1983-34222616 CTTAAGAATGATTTCTCCATCTTCCCTTGGGAGCTCCTGAGACCTTTAAGAGCATTGAATGGTG ACCCATAGTTTCTATTTCCATGTTTTTTGAAGTTAAACAAGCTTAGACTATTGAAACATAAAGA AATAAATGTGTTAAGTGTTGCATAGGCCAAACAAAAATAAGAGCTAAATAGCAGAAGAAACAGC AGCAAAGACCTGCATACATCTCCCACTCCGTCTACATATATTGTGAAGTCTGAGATGAAGCGCA GAATGTCATCAACTCGCTTAGGTACCTCAGAAATAAGCAAGTAAGGAGTGATGAAAATGGAGGC CATCTCTTCAAGTAGCATGATTATAGTATACGGAAATAATGTCTCAAATTCTCTTCGTACAAGT TCGCTGTTCTCTTTACCACGCCATCGCTTTGGCATGTAATGTGTTTGGTGAACAGCGAGGCACA TGGCCCCTTCTGGGTCAAAAACTTGAAGCTCATCGGCCACTACTTTTCGACTTATAGCTGCTAT TGTTCCAAAAACAATAGTATACCAGAGAAGATTTCTTCCAAAAATATGTCCTTCAAGAATAGAT TCACCCACAAATCCAATGATTATTAGAGCACCAGCCAAGCCACCAGAAACAAAAGATACAAATT TAGCCATGATGGAAACCAGTGGGGTTGGAAATTGCTTCAAGTAATTTAAAGAATGAACAGCGCT GTTGTTCATTCTGTGTCTAAAGAAGTGATCAACCTCGTTATATTCCCTAAAGATCCACCTTGAT AAGTTTGACCACCGTCTAGATGATGCTGTACTAGGGTGATTATAAATTTCTTCAGCATGCCTTA GAATGACGTACACCAATGGAAATATCACAAGGCAGGGTGATAGGATAAGCATTGCAATGCCAAC AAATATAAGTCGCTTTCTCAACACATCTGGGCTTGTCAAAAACTCTTTCCTTACACAAAATTTA CTATCGAACATACTTTGAAAGATGCACCAGTTTAAGGTCCATTCAAGGGACTTTGGAAGTATCA GATAGTTTCTCCTGCCATGCTCATGTGATCCAGTTGGGCCAGCCCCAGGCACACAAGAATGAAT TGGAAAAGAAAGAATGCCTTTATTGACCATCCCAATCAAATAATTTTCTTTCCTCATGATTCTC ATGATAATATCATGCTCTGAGAGATCCCTAACAACACATAGTTTTTGAGATTTCTGGAGCAGGA CAACTTTCTCAATTATTTTGGGCCATGATATAGTTTGAATCTCAAGATCATTGACCTTAAGTCT GTCATAGTAGAACTGACGAACATTGAGTGTACTTCTTAACTGTACAAAGAACTTGAGAAAGTTG GTAAGTCCATAAGCTGTCATTATGACCATTGATCCAACAGTTATCATTTTGGGCAATGTGAAGG GAACTAATGGATCATGCTTAATGGCCTTCATAAGATCACATGGTTTCTCCCCAGACTCAAGTGC CTCCACACCGCATTTCAAATGAATAAGAGTATCCCAATCAACAAATAAGAAAAAGAACCCGATA CAGCATACCATAAAAAGTACATTGAGGATCTCTATTATCCATTTGGTAATGATACACCTGAGCC CTTTTGCGCAGAAATATTCGTAAAGCCTTTCAAAGAAAATGTCCAGATCAGGGATAGGTTCTTC CTTGACGCCTTCGTCATGGAGAAGTCCAGATGGGCTCTCGCTTCGAGAACTTGGCAATCTCCGG TAGTCGGACAACTCTATTTCAGGTGGAATATCAACAAGCAGCTGCGCTGATAACGGCGATTGGC TTCTCCATGGCCAGTTAAGTCTTGTTTGTGCATGTGCGTCCTTCGAACGGAAGGACATCATTCA TGAAAAGAGAAAGCAGGGCCAGTTGATAGGTCCCTTGCCATGCCAGACGTACACAC
Genomic sequence	CTTAAGAATGATTTCTCCATCTTCCCTTGGGAGCTCCTGAGACCTTTAAGAGCATTGAATGGTG ACCCATAGTTTCTATTTCCATGTTTTTTGAAGTTAAACAAGCTTAGACTATTGAAACATAAAGA AATAAATGTGTTAAGTGTTGCATAGGCCAAACAAAAATAAGAGCTAAATAGCAGAAGAAACAGC AGCAAAGACCTGCATACATCTCCCACTCCGTCTACATATATTGTGAAGTCTGAGATGAAGCGCA GAATGTCATCAACTCGCTAGAGATAATAAGAATTCAGAACTATCAATAAACTTGGATTACATGA AAATCAGTGTTGAGTTAGTTCAGAACATTACCTTAGGTACCTCAGAAATAAGCAAGTAAGGAGT GATGAAAATGGAGGCCATCTCTTCAAGTAGCATGATTATAGTATACTGCATGCACAGATTGTCA AGTCAATTTTTATTGCCATATAATTGAAGCAGCAAACCCCATAGCTGATTGGCTTATACCCCAG ATGTAATCATAAGCTGTAAAGCAGAACCATGGTCAAGGTTTTAATGCAACTATGCTAGAGAAAT ATTCCTATGAATCTATAAAGCTACCCAAAACAGTTTCTAGGATAGATCCAAACTACCATTTCTC CAATATTACTTAAGTTCGAACGATAAAAAATACCCCCTCCATTCATTTTTATAAGGCACGTTTT TTTATTTTAAAAAAAAATATTTATAAGGATATTTTGACAGTTCATATCTCTTTATAGTCATTTA TTACTAAATCAACATCACATTAAAAGTACTTTGAAGAACAGTCTAGTTTTATAATTTTTTAACA ATGAACTTCCATATAATTAGAATAAATCATTGGTTAAAAGTTAGGAAATCTGACTTTTCCCAAT AAAAAAATACGCCTTACAAATTGAATAGAAGGGGTAGTAGAAAATAAGTTGACAACAAATTCTT TTAGTACTGCAATGGAATGGGGAGTTTCGGAAAGGGGTCAATTAATACAAAGAAAATGGATGGA TTAGAATTTATACATTCATCTTAAAGCTAGACGGTATCGCTTGCACACGAAAATCTTTTAATAT CTTGACAAGTTGGTAAAATATGGTATACACAGAATTCTGGGCCAGCTAAGCTTATCTTAAATGA ACTTAAACTAGAGCTCAATTAGTTACCGGAAATAATGTCTCAAATTCTCTTCGTACAAGTTCGC TGTTCTCTTTACCACGCCATCGCTTTGGCATGTAATGTGTTTGGTGAACAGCGAGGCACATGGC CCCTTCTGGGTCAAAAACTTGAAGCTCATCGGCCACTACTTTTCGACTTATAGCTGCTATTGTT CCAAAAACAATAGTATACCAGAGAAGATTTCTTCCAAAAATCTGCAAAAATAACAGCCACATCA AGTTATGGAGACCTCCACAAGTCATTTCAAGTTGCAGACATGCCACGAAATAGTTGAATTTACA ATCCCCACAAATTTAATCCATATGCATAATTCTAACCTGATGCAAGTTGTGACCTCAAGTGTTT GGTGTTTGTTGCCAGCATGAAAAGTTGTGACCTCAAGTGTTTTGTGACCTCAAGTCCACTGGAT CAAATGTGTTCACCTAATATGTTGTCAAACCCTCCCAAACCACCCTCTCCTTCCTATAGTGGGC AACTATATGGATCACTCTAAGCTCACATCAAGGCAAATATGCGGATCCCATAAAGTAAGACTTA GCACTGGGACAACACTAGTAGGCGATGAATACAGCTATTCCAATAGCAAGCAGGTATTTGCATC TTGGAGTGACTTATAGCAGGTATTTGCAATTTAACCAAAGAAACAATGCAAAATAAAGTGCTTA CATGTCCTTCAAGAATAGATTCACCCACAAATCCAATGATTATTAGAGCACCAGCCAAGCCACC AGAAACAAAAGATACAAATTTAGCCATGATGGAAACCAGTGGGGTTGGAAATTGCTTCAAGTAA TTTAAAGAATGAACAGCGCTGTTGTTCATTCTGTGTCTAAAGAAGTGATCAACCTGCAATGTTT GCAATCAGTTAGCCTTATATCAGTCAAACAATACTTGCACATACTAACTATGGGATTGATTAGC AACAGAACTAAGATACGGAAAGCTGGAGAGCTCAAAGATTCATTTAGAAAATGTTACAGCTGCA ATAGAAGAAAAAAATAATGATGAGTTCTTAGGAGAAGCTACCTCGTTATATTCCCTAAAGATCC ACCTTGATAAGTTTGACCACCGTCTAGATGATGCTGTACTAGGGTGATTATAAATTTCTTCAGC ATGCCTTAGAATGACGTACACCAATGGAAATATCACAAGGCAGGGTGATAGGATAAGCATTGCA ATGCCAACAAATATAAGTCGCTTTCTCAACACATCTGGGCTTGTCAAAAACTCTTTCCTTACAC AAAATTTACTGAAAAAGGAGAATGAACATTTTGTAATAGAATACACAATGAAGAGGAAGAAAAC CCTAGTGAAATAAATTATTAGTAAACACTAAACAGAATGATTTGAACCATGCTGAAGCGATGCA TGAATGCAGGGTAGAAAGAAATCTGGTATACACATTGGAAGTTGGGGAAGTCTAGATTGTAATG AGTAACCTTCACATGATCTGTTGCATGAGCTTCAGATGGACATGAAGAACTAGGATTCATCATA AATGATTTGTTCTATATGCATAGGCTATTTAAGCTAACAAGGTAATATGACACAACGCATCTGG TCAGCTTGAAAATGTATTAGTACAGATTGTGTTAGCACTTAGAGATCGGTATGCGAGTACCGAG TATACACACTGTAGTACGTGTTATGACAGAAGTTCTGTTCTATACAAAGTGTCACCAGTATTAA GTAAATACAAAATAAGTAAAATAATAAGGATTGGTATTGACAGATAGTGGATTTATTTCAGACT TCTAAAGTTCTGATGCAGCCAGTTCTGAAGCAGCAGCCTAACAGCTAATGCCTTCTTAAAGGCC TAGTTCCGCTTTTTTCCCATAAACGGCCTAGTTGCTCTGGGCTGAGCTAGAAAGAGTAGCATGT AAAAACAACACATAGCTTGGTCATGTAGAGGCTAAAGCAATTTAACAAACTATATTTTACAAAA AAAAAAGATCCAATGGAAGTAAGCAGTTACAGACTTCCTTACCTATCGAACATACTTTGAAAGA TGCACCAGTTTAAGGTCCATTCAAGGGACTTTGGAAGTATCAGATAGTTTCTCCTGCCATGCTC ATGTGATCCAGTTGGGCCAGCCCCAGGCACACAAGAATGAATTGGAAAAGAAAGAATGCCTTTA TTGACCATCCCAATCAAATAATTTTCTTTCCTCATGATTCTCATGATAATATCATGCTCTGAGA GATCCCTAACAACACATAGTTTTTGAGATTTCTGGAGCAGGACAACTTTCTCAATTATTTTGGG CCATGATATAGTTTGAATCTCAAGATCATTGACCTTAAGTCTGCATAAAGGTAAACAGAATAAG GGCAAAGTCATTGCTCTGAGCTACAAAGAAAAAAGATTAAGCATGAAAAACATAGGCAGAAAAG TTACCTGTCATAGTAGAACTGACGAACATTGAGTGTACTTCTTAACTGTACAAAGAACTTGAGA AAGTTGGTAAGTCCATAAGCTGTCATTATGACCATTGATCCAACAGTTATCATTTTGGGCAATG TGAAGGGAACTAATGGATCATGCTTAATGGCCTTCATAAGATCACATGGTTTCTCCCCAGACTC AAGTGCCTCCACACCGCATTTCAAATGAATAAGAGTATCCCAATCAACAAATAAGAAAAAGAAC CCGATACAGCATACCATAAAAAGTACATTGAGGATCTCTATTATCCATTTGGTAATGATACACC TGAGCCCTTTTGCGCAGAAATATTCGTAAAGCCTTTCAAAGAAAATGTCCAGATCAGGGATAGG TTCTTCCTTGACGCCTTCGTCATGGAGAAGTCCAGATGGGCTCTCGCTTCGAGAACTTGGCAAT CTCCGGTAGTCGGACAACTCTATTTCAGGTGGAATATCAACAAGCAGCTGCGCTGATAACGGCG ATTGGCTTCTCCATGGCCAGTTAAGTCTTGTTTGTGCATGTGCGTCCTTCGAACGGAAGGACAT CATTCATGAAAAGAGAAAGCAGGGCCAGTTGATAGGTCCCTTGCCATGCCAGACGTACACAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							osa_circ_018854* osi_circ_004674* 						
					
						PMCS
						0.086589336

Conservation Information
Conserved circRNAs	osa_circ_018854* osi_circ_004674*
PMCS	0.086589336

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							34222559-34222513(-)
						
						Potential amino acid sequence
						
							MMSFRSKDAHAQTRLNWPWRSQSPLSAQLLVDIPPEIELSDYRRLPSSRSESPSGLLHDEGVKE
EPIPDLDIFFERLYEYFCAKGLRCIITKWIIEILNVLFMVCCIGFFFLFVDWDTLIHLKCGVEA
LESGEKPCDLMKAIKHDPLVPFTLPKMITVGSMVIMTAYGLTNFLKFFVQLRSTLNVRQFYYDR
LKVNDLEIQTISWPKIIEKVVLLQKSQKLCVVRDLSEHDIIMRIMRKENYLIGMVNKGILSFPI
HSCVPGAGPTGSHEHGRRNYLILPKSLEWTLNWCIFQSMFDSKFCVRKEFLTSPDVLRKRLIFV
GIAMLILSPCLVIFPLVYVILRHAEEIYNHPSTASSRRWSNLSRWIFREYNEVDHFFRHRMNNS
AVHSLNYLKQFPTPLVSIMAKFVSFVSGGLAGALIIIGFVGESILEGHIFGRNLLWYTIVFGTI
AAISRKVVADELQVFDPEGAMCLAVHQTHYMPKRWRGKENSELVRREFETLFPYTIIMLLEEMA
SIFITPYLLISEVPKRVDDILRFISDFTIYVDGVGDVCRSLLLFLLLFSSYFCLAYATLNTFIS
LCFNSLSLFNFKKHGNRNYGSPFNALKGLRSSQGKMEKSFLRCVRLAWQGTYQLALLSLFMNDV
LPFEGRTCTNKT*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	34222559-34222513(-)
Potential amino acid sequence	MMSFRSKDAHAQTRLNWPWRSQSPLSAQLLVDIPPEIELSDYRRLPSSRSESPSGLLHDEGVKE EPIPDLDIFFERLYEYFCAKGLRCIITKWIIEILNVLFMVCCIGFFFLFVDWDTLIHLKCGVEA LESGEKPCDLMKAIKHDPLVPFTLPKMITVGSMVIMTAYGLTNFLKFFVQLRSTLNVRQFYYDR LKVNDLEIQTISWPKIIEKVVLLQKSQKLCVVRDLSEHDIIMRIMRKENYLIGMVNKGILSFPI HSCVPGAGPTGSHEHGRRNYLILPKSLEWTLNWCIFQSMFDSKFCVRKEFLTSPDVLRKRLIFV GIAMLILSPCLVIFPLVYVILRHAEEIYNHPSTASSRRWSNLSRWIFREYNEVDHFFRHRMNNS AVHSLNYLKQFPTPLVSIMAKFVSFVSGGLAGALIIIGFVGESILEGHIFGRNLLWYTIVFGTI AAISRKVVADELQVFDPEGAMCLAVHQTHYMPKRWRGKENSELVRREFETLFPYTIIMLLEEMA SIFITPYLLISEVPKRVDDILRFISDFTIYVDGVGDVCRSLLLFLLLFSSYFCLAYATLNTFIS LCFNSLSLFNFKKHGNRNYGSPFNALKGLRSSQGKMEKSFLRCVRLAWQGTYQLALLSLFMNDV LPFEGRTCTNKT*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d028417_circ_g.1

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