CircRNA Name |
AAAA02041788.1_circ_ig.1 |
ID in PlantcircBase |
osi_circ_019011 |
Alias |
Chr05:16590685_16600378(MH63RS2), Chr05:16590685_16605276(MH63RS2), Chr05:16590890_16600589(MH63RS2), Chr05:16590890_16605487(MH63RS2), Chr05:16591503_16600781(MH63RS2), Chr05:16591503_16605678(MH63RS2), Chr05:16595582_16605276(MH63RS2), Chr05:16595787_16605487(MH63RS2), Chr05:16596400_16605678(MH63RS2), Chr05:16590685_16600378(MH63RS2), Chr05:16590685_16605276(MH63RS2), Chr05:16590890_16600589(MH63RS2), Chr05:16590890_16605487(MH63RS2), Chr05:16591503_16600781(MH63RS2), Chr05:16591503_16605678(MH63RS2), Chr05:16596400_16605678(MH63RS2) |
Organism |
Oryza sativa ssp. indica |
Position |
chrAAAA02041788.1: 1-4375 JBrowse» |
Reference genome |
Oryza_indica.ASM465v1.42 |
Type |
ig-circRNA
|
Identification method |
CIRCexplorer2, CIRCexplorer2, CIRCexplorer2, CIRCexplorer2, CIRCexplorer2, CIRCexplorer2, CIRCexplorer2, CIRCexplorer2, CIRCexplorer2, CIRCexplorer2, CIRCexplorer2, CIRCexplorer2, CIRCexplorer2, CIRCexplorer2, CIRCexplorer2, CIRCexplorer2 |
Parent gene |
NA |
Parent gene annotation |
NA |
Parent gene strand |
NA |
Alternative splicing |
NA |
Support reads |
NA |
Tissues |
root, leaf, panicle |
Exon boundary |
NA-NA
"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
|
Splicing signals |
-GG
The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
|
Number of exons covered |
NA
|