Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | AT1G24706_circ_g.4 |
ID in PlantcircBase | ath_circ_004199 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 8744677-8745857 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | PcircRNA_finder |
Parent gene | AT1G24706 |
Parent gene annotation |
THO complex subunit 2 |
Parent gene strand | + |
Alternative splicing | AT1G24706_circ_g.1 AT1G24706_circ_g.2 AT1G24706_circ_g.3 AT1G24706_circ_g.5 AT1G24706_circ_g.6 AT1G24706_circ_g.7 AT1G24706_circ_g.8 AT1G24706_circ_g.9 |
Support reads | 2 |
Tissues | whole_plant |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT1G24706.8:4 AT1G24706.3:4 AT1G24706.7:4 AT1G24706.4:4 AT1G24706.9:4 AT1G24706.2:4 AT1G24706.5:4 AT1G24706.6:4 AT1G24706.1:4 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.150061212 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Chu et al., 2017 |