Detailed infomation of each circRNA
General Information | |
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CircRNA Name | POPTR_0004s09520_circ_ag.2 |
ID in PlantcircBase | pop_circ_001268 |
Alias | Chr04:8262977|8267956 |
Organism | Populus trichocarpa |
Position | chr4: 8057696-8062675 JBrowse» |
Reference genome | Populus trichocarpa genome v3.0 |
Type | ag-circRNA |
Identification method | find_circ |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | POPTR_0004s09520_circ_ag.1 POPTR_0004s09520_circ_ag.3 POPTR_0004s09520_circ_ag.4 POPTR_0004s09520_circ_ag.5 POPTR_0004s09520_circ_ag.6 POPTR_0004s09520_circ_ag.7 POPTR_0004s09520_circ_ag.8 POPTR_0004s09520_circ_ag.9 |
Support reads | NA |
Tissues | stem cambium |
Exon boundary | NA-NA |
Splicing signals | GA-TC |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.591250991 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Zheng et al., 2020 |