Plant Circular RNA Database

Detail information of AT4G21670_circ_g.4

			
						 General Information
					
						CircRNA Name
						AT4G21670_circ_g.4
					
						ID in PlantcircBase
						ath_circ_032048
					
						Alias
						Ath_circ_FC2745, Ath_circ_FC2746, Ath_circ_FC5727
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr4: 11512771-11516338  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							AT4G21670						
					
						Parent gene annotation
						
							RNA polymerase II C-terminal domain phosphatase-like 1
							
						Parent gene strand
						+
					
						Alternative splicing
						
							AT4G21670_circ_g.2 AT4G21670_circ_g.3 AT4G21670_circ_g.5 AT4G21670_circ_g.6 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						AT4G21670.1:12

General Information
CircRNA Name	AT4G21670_circ_g.4
ID in PlantcircBase	ath_circ_032048
Alias	Ath_circ_FC2745, Ath_circ_FC2746, Ath_circ_FC5727
Organism	Arabidpsis thaliana
Position	chr4: 11512771-11516338 JBrowse»
Reference genome	TAIR10.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	AT4G21670
Parent gene annotation	RNA polymerase II C-terminal domain phosphatase-like 1
Parent gene strand	+
Alternative splicing	AT4G21670_circ_g.2 AT4G21670_circ_g.3 AT4G21670_circ_g.5 AT4G21670_circ_g.6
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	AT4G21670.1:12

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AACCAAATTCCAGTGTGCATCGGAGGGTCTTGAGATGGCTTTTCAATCTCAGCGTCAGCTTCCA
TCTGACATGGTCCACAGAGATGAATTACATGCTCAGattcgtgatacaagtgttcttgtgagaa
tgaggccctcatgggaggaacttcgaagctatttgacagcaaaagggcgtaagcgttttgaagt
atatgttt

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							ATTCGTGATACAAGTGTTCTTGTGAGAATGAGGCCCTCATGGGAGGAACTTCGAAGCTATTTGA
CAGCAAAAGGGCGTAAGCGTTTTGAAGTATATGTTTGCACGATGGCTGAAAGAGATTACGCCTT
AGAGATGTGGAGGCTCCTTGATCCAGAAGGGAATTTGATAAACACAAATGACTTGCTTGCTCGC
ATCGTTTGTGTGAAATCTGGTATACTTTTTGGTATCTTATACCTGCTTATATTTCATCATGGTA
AAACTTCTTACAAGCTTGTAATTAACCACCACAGGTTTTAAAAAGTCACTGTTCAATGTGTTTC
TCGATGGAACCTGCCATCCAAAGATGGCATTGGTAATTGATGATCGATTGAAAGTTTGGGATGA
GAAGGATCAGCCGAGGGTACATGTGGTTCCTGCATTCGCTCCCTATTATTCTCCTCAAGCTGAA
GTAAGTATAATTTTTACCTAGTTGAAATTGGTTATGAAAAATGCAGAAGCATGTGAATTTGATA
AGAATATTATTAATCAAAAGAATCACAAGTCATTTAGAATGGAACAAATGAAGCCTTATAAGAC
CTAACATAAGCTAGCTTTGTGGTGAGTTCTACGCAAGGGGTCTTTGTGGGCCTGGTTTGTTGCA
CAATTTCTACCAGAAGTGATAGTCTTGACTTTTCAGTAATAAATGGTGTCACATATAGCTCGTT
TCCTTTTCTTGTAGGCTGCTGCAACACCAGTACTATGTGTTGCCAGGAACGTTGCCTGTGGTGT
CAGAGGTGGATTTTTCAGGTAAGATGTCAGATTTGATAATAGTAGTTTGTTTTCTTGACATCTC
TACTGATCAAGGGTGCTTCCTTAGTACATACTTACGGTGAAATGGTATTTGAACTTGGTTACAG
GGATTTTGATGATAGTCTGCTACCAAGGATTGCTGAAATTTCTTATGAGAATGATGCTGAGGAT
ATTCCTTCTCCGCCTGATGTCAGCCATTATTTGGTGTCGGAGGTTAGTCGTGATACTTGTTAGC
GATTGGGAGTAGATAATTTTTTGGTTCTCTTCCAGGCAGTCTGGGAGCTTATTTTACTCACCTT
TGAAACTGCTTCCCAGTAACTCATTCTTTTTTCAATATAGGATGATACATCGGGTTTAAATGGG
AACAAAGATCCACTTTCCTTTGACGGGATGGCTGATACTGAAGTGGAGAGAAGACTGAAGGTGA
TTTACATTTTGAGGCTCTATTGTTACTGAGTTATTGTGGTGATCCATTAAAGATGCCAACTCCA
GTAAACATGGCTTCTGGTTTAAATTTTCTGCCCAATGTTGAAATTCAAATACATTTTTCCGTTT
TATTCAGGAGGCAATTTCTGCATCTTCAGCTGTCCTTCCGGCGGCAAATATAGATCCGAGGATA
GCTGCTCCCGTTCAGTTCCCCATGGCTTCTGCTTCTTCTGTTTCAGTTCCAGTACCAGTACAAG
TCGTGCAACAAGCAATACAACCTTCAGCTATGGCCTTTCCAAGTATTCCATTTCAACAACCTCA
ACAACCGACATCAATAGCTAAACACTTGGTTCCTTCAGAACCAAGCTTGCAGAGTTCTCCTGCT
AGAGAGGAAGGTGAGGTACCTGAATCAGAATTAGATCCAGATACTAGGAGGAGACTCCTCATAT
TGCAGCATGGACAAGATACTAGGGATCCTGCTCCAAGTGAACCTTCATTTCCTCAGAGACCTCC
AGTTCAAGCTCCACCCTCACATGTGCAATCAAGAAATGGCTGGTTTCCTGTTGAGGAGGAGATG
GATCCTGCTCAAATTCGTCGAGCAGTCTCAAAAGAATATCCGTTGGATTCTGAAATGATTCATA
TGGAAAAGCACAGGCCTCGTCATCCATCATTTTTTTCTAAGATTGATAACTCAACTCAGTCTGA
CAGGATGCTTCATGAGAATCGCAGGCCGCCAAAGGAGGTACCACTAATCTTATTTAACCTATGA
TTTTACAGTTGTCAGTTTTTTTGGTCTTTATACTGCTGTACGACGTTTAGTGCTCACTGTGATA
TATTTGCAGTCTCTCCGGAGAGATGAACAGTTACGTTCAAATAACAATCTACCTGACTCTCATC
CTTTCTATGGTAAGCCATCAAAGTTATTTGTTCTTGTATCATTTTGTTCTGAAGATAAATCACT
GACTTGGGTATTGGGATGGACTCTCTAGGGGAGGATGCGTCTTGGAATCAATCTTCCTCTAGGA
ACAGTGATCTTGACTTCCTACCTGAACGAAGTGTCTCAGCAACGGAGACTTCAGCTGATGTTCT
ACACGGAATTGCTATCAAATGTGGAGCTAAGGTATGTAAATATCATCATGATTACCATTAATTC
CATACGTGAGTTGATGTGTTATTATTCCATGACATTGTAGGTGGAGTACAAACCAAGTTTAGTT
TCTAGTACAGATTTGCGGTTCTCTGTTGAGGTACGTATTGCTCTTAGACGTATCTGTTTGTATG
GTGTCAGTAATTTTGGTGGAACCTTATGCTCTTTGAGATCCTATATTTCCTTTGAGTGAGGTTA
CTTTGTTGATTGTGTCAACTGTACATTAAATCTATGTTTTTTTTGCAGGCTTGGCTTTCTAATC
AAAAAATTGGAGAAGGGATTGGCAAATCGAGAAGAGAAGCCCTGCATAAGGCTGCTGAAGCTTC
TATACAGAATTTAGCTGGTAAGACTTTCTGACTCATGATTTACTCGTGTCTTAATCTTTGTCTG
CAGAGATACTATTTGAGATAGATTGTTTGAATCTGCTATATTGGGTGAATGTTATTTGTTTGAT
GTTTCTAAACCATCTTCACAATATTGGGTGTAGATCTCAATTTTTCAACCAATCTGTTTAGTCT
GTAATATTAATAGATCTATTGTAGCTTCGTGTTGGTCCTCATAAATGGGTTTATATCAATGAGT
ATGAGTACTGCCACCACAAACGGTTGCGTGTCAGTATGTTATGATATCAAAACTGTGGGTCCCT
TCCCTTTACAAGGGTGAGAGCTATCTTGGATTTGTGGCAGTTGGCTCAGGTTTAATATTGGTCG
GCTTCATTCACATTGTTCTTATAATGAGGCTTTAAACTCATTGTTGTTCGTTTGTTTCCAGTTT
CTTGAGTTCTTACTCCTTTTTTTGCAGATGGATATATGCGTGCAAATGGTGACCCAGGGCCCAG
CCACAGAGATGCTACCCCCTTCACCAATGAAAATATAAGTATGGGAAACGCAAATGCGCTTAAT
AATCAGCCATTTGCTAGAGATGAAACAGCGTTGCCAGTTTCTTCTAGACCTACAGATCCGAGAT
TAGAAGGTTCTATGAGGCACACTGGCTCCATTACTGCACTCAGGGAATTGGTATGTATCTCCTT
AGTGCGGATACTGTTGATTGATATGGTTGCTTGCTTACATTCACATATTGTTTTTTCTCATCTT
TGATTCATCTGTAACCAAATTCCAGTGTGCATCGGAGGGTCTTGAGATGGCTTTTCAATCTCAG
CGTCAGCTTCCATCTGACATGGTCCACAGAGATGAATTACATGCTCAG
						
					

			
		

Sequences
Splice junction sequence	AACCAAATTCCAGTGTGCATCGGAGGGTCTTGAGATGGCTTTTCAATCTCAGCGTCAGCTTCCA TCTGACATGGTCCACAGAGATGAATTACATGCTCAGattcgtgatacaagtgttcttgtgagaa tgaggccctcatgggaggaacttcgaagctatttgacagcaaaagggcgtaagcgttttgaagt atatgttt
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	ATTCGTGATACAAGTGTTCTTGTGAGAATGAGGCCCTCATGGGAGGAACTTCGAAGCTATTTGA CAGCAAAAGGGCGTAAGCGTTTTGAAGTATATGTTTGCACGATGGCTGAAAGAGATTACGCCTT AGAGATGTGGAGGCTCCTTGATCCAGAAGGGAATTTGATAAACACAAATGACTTGCTTGCTCGC ATCGTTTGTGTGAAATCTGGTATACTTTTTGGTATCTTATACCTGCTTATATTTCATCATGGTA AAACTTCTTACAAGCTTGTAATTAACCACCACAGGTTTTAAAAAGTCACTGTTCAATGTGTTTC TCGATGGAACCTGCCATCCAAAGATGGCATTGGTAATTGATGATCGATTGAAAGTTTGGGATGA GAAGGATCAGCCGAGGGTACATGTGGTTCCTGCATTCGCTCCCTATTATTCTCCTCAAGCTGAA GTAAGTATAATTTTTACCTAGTTGAAATTGGTTATGAAAAATGCAGAAGCATGTGAATTTGATA AGAATATTATTAATCAAAAGAATCACAAGTCATTTAGAATGGAACAAATGAAGCCTTATAAGAC CTAACATAAGCTAGCTTTGTGGTGAGTTCTACGCAAGGGGTCTTTGTGGGCCTGGTTTGTTGCA CAATTTCTACCAGAAGTGATAGTCTTGACTTTTCAGTAATAAATGGTGTCACATATAGCTCGTT TCCTTTTCTTGTAGGCTGCTGCAACACCAGTACTATGTGTTGCCAGGAACGTTGCCTGTGGTGT CAGAGGTGGATTTTTCAGGTAAGATGTCAGATTTGATAATAGTAGTTTGTTTTCTTGACATCTC TACTGATCAAGGGTGCTTCCTTAGTACATACTTACGGTGAAATGGTATTTGAACTTGGTTACAG GGATTTTGATGATAGTCTGCTACCAAGGATTGCTGAAATTTCTTATGAGAATGATGCTGAGGAT ATTCCTTCTCCGCCTGATGTCAGCCATTATTTGGTGTCGGAGGTTAGTCGTGATACTTGTTAGC GATTGGGAGTAGATAATTTTTTGGTTCTCTTCCAGGCAGTCTGGGAGCTTATTTTACTCACCTT TGAAACTGCTTCCCAGTAACTCATTCTTTTTTCAATATAGGATGATACATCGGGTTTAAATGGG AACAAAGATCCACTTTCCTTTGACGGGATGGCTGATACTGAAGTGGAGAGAAGACTGAAGGTGA TTTACATTTTGAGGCTCTATTGTTACTGAGTTATTGTGGTGATCCATTAAAGATGCCAACTCCA GTAAACATGGCTTCTGGTTTAAATTTTCTGCCCAATGTTGAAATTCAAATACATTTTTCCGTTT TATTCAGGAGGCAATTTCTGCATCTTCAGCTGTCCTTCCGGCGGCAAATATAGATCCGAGGATA GCTGCTCCCGTTCAGTTCCCCATGGCTTCTGCTTCTTCTGTTTCAGTTCCAGTACCAGTACAAG TCGTGCAACAAGCAATACAACCTTCAGCTATGGCCTTTCCAAGTATTCCATTTCAACAACCTCA ACAACCGACATCAATAGCTAAACACTTGGTTCCTTCAGAACCAAGCTTGCAGAGTTCTCCTGCT AGAGAGGAAGGTGAGGTACCTGAATCAGAATTAGATCCAGATACTAGGAGGAGACTCCTCATAT TGCAGCATGGACAAGATACTAGGGATCCTGCTCCAAGTGAACCTTCATTTCCTCAGAGACCTCC AGTTCAAGCTCCACCCTCACATGTGCAATCAAGAAATGGCTGGTTTCCTGTTGAGGAGGAGATG GATCCTGCTCAAATTCGTCGAGCAGTCTCAAAAGAATATCCGTTGGATTCTGAAATGATTCATA TGGAAAAGCACAGGCCTCGTCATCCATCATTTTTTTCTAAGATTGATAACTCAACTCAGTCTGA CAGGATGCTTCATGAGAATCGCAGGCCGCCAAAGGAGGTACCACTAATCTTATTTAACCTATGA TTTTACAGTTGTCAGTTTTTTTGGTCTTTATACTGCTGTACGACGTTTAGTGCTCACTGTGATA TATTTGCAGTCTCTCCGGAGAGATGAACAGTTACGTTCAAATAACAATCTACCTGACTCTCATC CTTTCTATGGTAAGCCATCAAAGTTATTTGTTCTTGTATCATTTTGTTCTGAAGATAAATCACT GACTTGGGTATTGGGATGGACTCTCTAGGGGAGGATGCGTCTTGGAATCAATCTTCCTCTAGGA ACAGTGATCTTGACTTCCTACCTGAACGAAGTGTCTCAGCAACGGAGACTTCAGCTGATGTTCT ACACGGAATTGCTATCAAATGTGGAGCTAAGGTATGTAAATATCATCATGATTACCATTAATTC CATACGTGAGTTGATGTGTTATTATTCCATGACATTGTAGGTGGAGTACAAACCAAGTTTAGTT TCTAGTACAGATTTGCGGTTCTCTGTTGAGGTACGTATTGCTCTTAGACGTATCTGTTTGTATG GTGTCAGTAATTTTGGTGGAACCTTATGCTCTTTGAGATCCTATATTTCCTTTGAGTGAGGTTA CTTTGTTGATTGTGTCAACTGTACATTAAATCTATGTTTTTTTTGCAGGCTTGGCTTTCTAATC AAAAAATTGGAGAAGGGATTGGCAAATCGAGAAGAGAAGCCCTGCATAAGGCTGCTGAAGCTTC TATACAGAATTTAGCTGGTAAGACTTTCTGACTCATGATTTACTCGTGTCTTAATCTTTGTCTG CAGAGATACTATTTGAGATAGATTGTTTGAATCTGCTATATTGGGTGAATGTTATTTGTTTGAT GTTTCTAAACCATCTTCACAATATTGGGTGTAGATCTCAATTTTTCAACCAATCTGTTTAGTCT GTAATATTAATAGATCTATTGTAGCTTCGTGTTGGTCCTCATAAATGGGTTTATATCAATGAGT ATGAGTACTGCCACCACAAACGGTTGCGTGTCAGTATGTTATGATATCAAAACTGTGGGTCCCT TCCCTTTACAAGGGTGAGAGCTATCTTGGATTTGTGGCAGTTGGCTCAGGTTTAATATTGGTCG GCTTCATTCACATTGTTCTTATAATGAGGCTTTAAACTCATTGTTGTTCGTTTGTTTCCAGTTT CTTGAGTTCTTACTCCTTTTTTTGCAGATGGATATATGCGTGCAAATGGTGACCCAGGGCCCAG CCACAGAGATGCTACCCCCTTCACCAATGAAAATATAAGTATGGGAAACGCAAATGCGCTTAAT AATCAGCCATTTGCTAGAGATGAAACAGCGTTGCCAGTTTCTTCTAGACCTACAGATCCGAGAT TAGAAGGTTCTATGAGGCACACTGGCTCCATTACTGCACTCAGGGAATTGGTATGTATCTCCTT AGTGCGGATACTGTTGATTGATATGGTTGCTTGCTTACATTCACATATTGTTTTTTCTCATCTT TGATTCATCTGTAACCAAATTCCAGTGTGCATCGGAGGGTCTTGAGATGGCTTTTCAATCTCAG CGTCAGCTTCCATCTGACATGGTCCACAGAGATGAATTACATGCTCAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.13009116

Conservation Information
Conserved circRNAs	NA
PMCS	0.13009116

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							11512798-11516335(+)
						
					

						Potential amino acid sequence
						
							MRPSWEELRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPEGNLINTNDLLARIVCVKSGFK
KSLFNVFLDGTCHPKMALVIDDRLKVWDEKDQPRVHVVPAFAPYYSPQAEAAATPVLCVARNVA
CGVRGGFFRDFDDSLLPRIAEISYENDAEDIPSPPDVSHYLVSEDDTSGLNGNKDPLSFDGMAD
TEVERRLKEAISASSAVLPAANIDPRIAAPVQFPMASASSVSVPVPVQVVQQAIQPSAMAFPSI
PFQQPQQPTSIAKHLVPSEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDPAPSEPS
FPQRPPVQAPPSHVQSRNGWFPVEEEMDPAQIRRAVSKEYPLDSEMIHMEKHRPRHPSFFSKID
NSTQSDRMLHENRRPPKESLRRDEQLRSNNNLPDSHPFYGEDASWNQSSSRNSDLDFLPERSVS
ATETSADVLHGIAIKCGAKVEYKPSLVSSTDLRFSVEAWLSNQKIGEGIGKSRREALHKAAEAS
IQNLADGYMRANGDPGPSHRDATPFTNENISMGNANALNNQPFARDETALPVSSRPTDPRLEGS
MRHTGSITALRELCASEGLEMAFQSQRQLPSDMVHRDELHAQIRDTSVLVRMRPSWEELRSYLT
AKGRKRFEVYVCTMAERDYALEMWRLLDPEGNLINTNDLLARIVCVKSGFKKSLFNVFLDGTCH
PKMALVIDDRLKVWDEKDQPRVHVVPAFAPYYSPQAEAAATPVLCVARNVACGVRGGFFRDFDD
SLLPRIAEISYENDAEDIPSPPDVSHYLVSEDDTSGLNGNKDPLSFDGMADTEVERRLKEAISA
SSAVLPAANIDPRIAAPVQFPMASASSVSVPVPVQVVQQAIQPSAMAFPSIPFQQPQQPTSIAK
HLVPSEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDPAPSEPSFPQRPPVQAPPSH
VQSRNGWFPVEEEMDPAQIRRAVSKEYPLDSEMIHMEKHRPRHPSFFSKIDNSTQSDRMLHENR
RPPKESLRRDEQLRSNNNLPDSHPFYGEDASWNQSSSRNSDLDFLPERSVSATETSADVLHGIA
IKCGAKVEYKPSLVSSTDLRFSVEAWLSNQKIGEGIGKSRREALHKAAEASIQNLADGYMRANG
DPGPSHRDATPFTNENISMGNANALNNQPFARDETALPVSSRPTDPRLEGSMRHTGSITALREL
CASEGLEMAFQSQRQLPSDMVHRDELHAQIRDTSVLVRMRPSWEELRSYLTAKGRKRFEVYVCT
MAERDYALEMWRLLDPEGNLINTNDLLARIVCVKSGFKKSLFNVFLDGTCHPKMALVIDDRLKV
WDEKDQPRVHVVPAFAPYYSPQAEAAATPVLCVARNVACGVRGGFFRDFDDSLLPRIAEISYEN
DAEDIPSPPDVSHYLVSEDDTSGLNGNKDPLSFDGMADTEVERRLKEAISASSAVLPAANIDPR
IAAPVQFPMASASSVSVPVPVQVVQQAIQPSAMAFPSIPFQQPQQPTSIAKHLVPSEPSLQSSP
AREEGEVPESELDPDTRRRLLILQHGQDTRDPAPSEPSFPQRPPVQAPPSHVQSRNGWFPVEEE
MDPAQIRRAVSKEYPLDSEMIHMEKHRPRHPSFFSKIDNSTQSDRMLHENRRPPKESLRRDEQL
RSNNNLPDSHPFYGEDASWNQSSSRNSDLDFLPERSVSATETSADVLHGIAIKCGAKVEYKPSL
VSSTDLRFSVEAWLSNQKIGEGIGKSRREALHKAAEASIQNLADGYMRANGDPGPSHRDATPFT
NENISMGNANALNNQPFARDETALPVSSRPTDPRLEGSMRHTGSITALRELCASEGLEMAFQSQ
RQLPSDMVHRDELHAQIRDTSVLVRMRPSWEELRSYLTAKGRKRFEVYVCTMAERDYALEMWRL
LDPEGNLINTNDLLARIVCVKSGFKKSLFNVFLDGTCHPKMALVIDDRLKVWDEKDQPRVHVVP
AFAPYYSPQAEAAATPVLCVARNVACGVRGGFFRDFDDSLLPRIAEISYENDAEDIPSPPDVSH
YLVSEDDTSGLNGNKDPLSFDGMADTEVERRLKEAISASSAVLPAANIDPRIAAPVQFPMASAS
SVSVPVPVQVVQQAIQPSAMAFPSIPFQQPQQPTSIAKHLVPSEPSLQSSPAREEGEVPESELD
PDTRRRLLILQHGQDTRDPAPSEPSFPQRPPVQAPPSHVQSRNGWFPVEEEMDPAQIRRAVSKE
YPLDSEMIHMEKHRPRHPSFFSKIDNSTQSDRMLHENRRPPKESLRRDEQLRSNNNLPDSHPFY
GEDASWNQSSSRNSDLDFLPERSVSATETSADVLHGIAIKCGAKVEYKPSLVSSTDLRFSVEAW
LSNQKIGEGIGKSRREALHKAAEASIQNLADGYMRANGDPGPSHRDATPFTNENISMGNANALN
NQPFARDETALPVSSRPTDPRLEGSMRHTGSITALRELCASEGLEMAFQSQRQLPSDMVHRDEL
HAQ(+)
						
					

						Sponge-miRNAs
						
							ath-miR5632-3p 						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	11512798-11516335(+)
Potential amino acid sequence	MRPSWEELRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPEGNLINTNDLLARIVCVKSGFK KSLFNVFLDGTCHPKMALVIDDRLKVWDEKDQPRVHVVPAFAPYYSPQAEAAATPVLCVARNVA CGVRGGFFRDFDDSLLPRIAEISYENDAEDIPSPPDVSHYLVSEDDTSGLNGNKDPLSFDGMAD TEVERRLKEAISASSAVLPAANIDPRIAAPVQFPMASASSVSVPVPVQVVQQAIQPSAMAFPSI PFQQPQQPTSIAKHLVPSEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDPAPSEPS FPQRPPVQAPPSHVQSRNGWFPVEEEMDPAQIRRAVSKEYPLDSEMIHMEKHRPRHPSFFSKID NSTQSDRMLHENRRPPKESLRRDEQLRSNNNLPDSHPFYGEDASWNQSSSRNSDLDFLPERSVS ATETSADVLHGIAIKCGAKVEYKPSLVSSTDLRFSVEAWLSNQKIGEGIGKSRREALHKAAEAS IQNLADGYMRANGDPGPSHRDATPFTNENISMGNANALNNQPFARDETALPVSSRPTDPRLEGS MRHTGSITALRELCASEGLEMAFQSQRQLPSDMVHRDELHAQIRDTSVLVRMRPSWEELRSYLT AKGRKRFEVYVCTMAERDYALEMWRLLDPEGNLINTNDLLARIVCVKSGFKKSLFNVFLDGTCH PKMALVIDDRLKVWDEKDQPRVHVVPAFAPYYSPQAEAAATPVLCVARNVACGVRGGFFRDFDD SLLPRIAEISYENDAEDIPSPPDVSHYLVSEDDTSGLNGNKDPLSFDGMADTEVERRLKEAISA SSAVLPAANIDPRIAAPVQFPMASASSVSVPVPVQVVQQAIQPSAMAFPSIPFQQPQQPTSIAK HLVPSEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDPAPSEPSFPQRPPVQAPPSH VQSRNGWFPVEEEMDPAQIRRAVSKEYPLDSEMIHMEKHRPRHPSFFSKIDNSTQSDRMLHENR RPPKESLRRDEQLRSNNNLPDSHPFYGEDASWNQSSSRNSDLDFLPERSVSATETSADVLHGIA IKCGAKVEYKPSLVSSTDLRFSVEAWLSNQKIGEGIGKSRREALHKAAEASIQNLADGYMRANG DPGPSHRDATPFTNENISMGNANALNNQPFARDETALPVSSRPTDPRLEGSMRHTGSITALREL CASEGLEMAFQSQRQLPSDMVHRDELHAQIRDTSVLVRMRPSWEELRSYLTAKGRKRFEVYVCT MAERDYALEMWRLLDPEGNLINTNDLLARIVCVKSGFKKSLFNVFLDGTCHPKMALVIDDRLKV WDEKDQPRVHVVPAFAPYYSPQAEAAATPVLCVARNVACGVRGGFFRDFDDSLLPRIAEISYEN DAEDIPSPPDVSHYLVSEDDTSGLNGNKDPLSFDGMADTEVERRLKEAISASSAVLPAANIDPR IAAPVQFPMASASSVSVPVPVQVVQQAIQPSAMAFPSIPFQQPQQPTSIAKHLVPSEPSLQSSP AREEGEVPESELDPDTRRRLLILQHGQDTRDPAPSEPSFPQRPPVQAPPSHVQSRNGWFPVEEE MDPAQIRRAVSKEYPLDSEMIHMEKHRPRHPSFFSKIDNSTQSDRMLHENRRPPKESLRRDEQL RSNNNLPDSHPFYGEDASWNQSSSRNSDLDFLPERSVSATETSADVLHGIAIKCGAKVEYKPSL VSSTDLRFSVEAWLSNQKIGEGIGKSRREALHKAAEASIQNLADGYMRANGDPGPSHRDATPFT NENISMGNANALNNQPFARDETALPVSSRPTDPRLEGSMRHTGSITALRELCASEGLEMAFQSQ RQLPSDMVHRDELHAQIRDTSVLVRMRPSWEELRSYLTAKGRKRFEVYVCTMAERDYALEMWRL LDPEGNLINTNDLLARIVCVKSGFKKSLFNVFLDGTCHPKMALVIDDRLKVWDEKDQPRVHVVP AFAPYYSPQAEAAATPVLCVARNVACGVRGGFFRDFDDSLLPRIAEISYENDAEDIPSPPDVSH YLVSEDDTSGLNGNKDPLSFDGMADTEVERRLKEAISASSAVLPAANIDPRIAAPVQFPMASAS SVSVPVPVQVVQQAIQPSAMAFPSIPFQQPQQPTSIAKHLVPSEPSLQSSPAREEGEVPESELD PDTRRRLLILQHGQDTRDPAPSEPSFPQRPPVQAPPSHVQSRNGWFPVEEEMDPAQIRRAVSKE YPLDSEMIHMEKHRPRHPSFFSKIDNSTQSDRMLHENRRPPKESLRRDEQLRSNNNLPDSHPFY GEDASWNQSSSRNSDLDFLPERSVSATETSADVLHGIAIKCGAKVEYKPSLVSSTDLRFSVEAW LSNQKIGEGIGKSRREALHKAAEASIQNLADGYMRANGDPGPSHRDATPFTNENISMGNANALN NQPFARDETALPVSSRPTDPRLEGSMRHTGSITALRELCASEGLEMAFQSQRQLPSDMVHRDEL HAQ(+)
Sponge-miRNAs	ath-miR5632-3p
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017;Chen et al., 2017a

circRNA

Detail information of AT4G21670_circ_g.4

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