Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | AT1G09080_circ_g.2 |
ID in PlantcircBase | ath_circ_001557 |
Alias | At_ciR3571 |
Organism | Arabidpsis thaliana |
Position | chr1: 2931069-2931640 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | find_circ |
Parent gene | AT1G09080 |
Parent gene annotation |
Probable mediator of RNA polymerase II transcription subunit 37b |
Parent gene strand | - |
Alternative splicing | AT1G09080_circ_g.3 |
Support reads | 2 |
Tissues | leaf |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G09080.1:2 AT1G09080.2:2 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.214985343 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Ye et al., 2015 |