Splice junction sequence |
GATTTTGGAGAGGAGTGCCACTCAAAGCCCATCTATAGGTAGCCTCCAAAGCAAAAACAGCTCT TGCAGTATTGCTACGTCTTTCTTTGATGTAATGAGCaattctaggaggaagagcaagatcagct gcccggcccaatttagtacgtcttaaaaggatgtccttcagaactttgtgtttaagcaatatca tggctctt
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 408 Transcript exons: 1473671-1473817,1473921-1473984,1474095-1474168,1474253- 1474375 AATTCTAGGAGGAAGAGCAAGATCAGCTGCCCGGCCCAATTTAGTACGTCTTAAAAGGATGTCC TTCAGAACTTTGTGTTTAAGCAATATCATGGCTCTTTTTCCCAGTCCAAAGCTTCCATATACTG TTATTGGCTTGGCCACATACTTGTTCCACCAACAGAAATGTCGAACTGCATTATGAGGACAGTG AGGGCAGCTTTGATGAGCAACGTAATCAAGAATTCTACAGTCACAATCCTTGCAAAAGTAATAC GAGTATGGGCGAATTTGCAAGAAGCGGATCAGTGAGTAAAGCTCTCCAACACGATTTTGGAGAG GAGTGCCACTCAAAGCCCATCTATAGGTAGCCTCCAAAGCAAAAACAGCTCTTGCAGTATTGCT ACGTCTTTCTTTGATGTAATGAGC
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Genomic sequence |
AATTCTAGGAGGAAGAGCAAGATCAGCTGCCCGGCCCAATTTAGTACGTCTTAAAAGGATGTCC TTCAGAACTTTGTGTTTAAGCAATATCATGGCTCTTTTTCCCAGTCCAAAGCTTCCATATACTG TTATTGGCTTGGCCACATACTAACAAGAATAGGAAAACAAAAAACCAGAAGGAAAAGATATAAA ATGGTAATCCTGCTTTAAAAAATTTGGTGATATAAAAAAAGTGTCACCCCAAAGTTACCTTGTT CCACCAACAGAAATGTCGAACTGCATTATGAGGACAGTGAGGGCAGCTTTGATGAGCACTGCAA ACACCACCAGAGAAAACAGAACCGCATAAATTGTTATTAACTATTAAACAAAACTATGAGAAAT ACGAAAAATGACTGGAAAATTAAGTGTGATAAAAATTTACACGTAATCAAGAATTCTACAGTCA CAATCCTTGCAAAAGTAATACGAGTATGGGCGAATTTGCAAGAAGCGGATCTGGGGAAAAAAAA ATATGCACATCAGCCATGTCGATAGTAATGTTCAAGTGCTATATACAAAATTCAGGAAAAGTTA ACAAACCAGTGAGTAAAGCTCTCCAACACGATTTTGGAGAGGAGTGCCACTCAAAGCCCATCTA TAGGTAGCCTCCAAAGCAAAAACAGCTCTTGCAGTATTGCTACGTCTTTCTTTGATGTAATGAG C |