Plant Circular RNA Database

Detail information of BGIOSGA005211_circ_g.4

			
						 General Information
					
						CircRNA Name
						BGIOSGA005211_circ_g.4
					
						ID in PlantcircBase
						osi_circ_002694
					
						Alias
						1:46275355|46279232
					
						Organism
						
							Oryza sativa ssp. indica						
					
						Position
						
							chr1: 46275355-46279232  JBrowse»						
					
						Reference genome
						
							Oryza_indica.ASM465v1.42						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							BGIOSGA005211						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						+
					
						Alternative splicing
						
							BGIOSGA005211_circ_g.2 BGIOSGA005211_circ_g.3 BGIOSGA005211_circ_g.5 BGIOSGA005211_circ_g.6 BGIOSGA005211_circ_g.7 						
					
						Support reads
						NA
					
						Tissues
						leaf
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						BGIOSGA005211-TA:9

General Information
CircRNA Name	BGIOSGA005211_circ_g.4
ID in PlantcircBase	osi_circ_002694
Alias	1:46275355\|46279232
Organism	Oryza sativa ssp. indica
Position	chr1: 46275355-46279232 JBrowse»
Reference genome	Oryza_indica.ASM465v1.42
Type	e-circRNA
Identification method	find_circ
Parent gene	BGIOSGA005211
Parent gene annotation	NA
Parent gene strand	+
Alternative splicing	BGIOSGA005211_circ_g.2 BGIOSGA005211_circ_g.3 BGIOSGA005211_circ_g.5 BGIOSGA005211_circ_g.6 BGIOSGA005211_circ_g.7
Support reads	NA
Tissues	leaf
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	BGIOSGA005211-TA:9

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TAGAAGATTGGCATATGATGTACTCCTGGCTATTAGTAATAGCTTGAGAAGCTCTGAGTCAAAC
AGTGAAGATTCAGATCTTCAACGACTATTCACAATGgttgaagagtgcattggggcagctgtca
ttgctttggggccagataaaatcctttcactaattccaataggttttgatgaggaccggctaac
atgctcaa

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							GTTGAAGAGTGCATTGGGGCAGCTGTCATTGCTTTGGGGCCAGATAAAATCCTTTCACTAATTC
CAATAGGTTTTGATGAGGACCGGCTAACATGCTCAAATACTTGGCTTCTGCCCATTTTAGATAA
GTATATCTATGGGGCCTCACCACAACAATTCCTAGAGCGCATTGTACCTCTAGCAGAATCTGTA
CAACAAGCTTCTAACATGGGTAGGTAAAGCCAATTCATTAGGTCTTAAATACATACGCAACATG
ATTTCCTAACCTTCTGCTTTAACTTCAGCCAAGTCAGCACGGAAATGTGAAGACTTGAAATCAT
GTTCCAATCAGCTGTGGAATTTGCTTCCTGCCTTCTGCCGCTACCCAGTTGATATATGTCAGAA
TTTCGGTTCTCTATCCAAGTTGCTACTAGAGATGTTGAAATGTGACAAGTATCTGTACAAATCC
GCTGTTAAAGCCCTGCAGGTGCAGTTTTCATTTACAGATATACTGCATTTTTCTTATCTTATCT
ATACTCATTTTCTTTCTGGAATTTCGAACTACAAGGCTGCTCCATGTCTTCTCTCAGACAACAT
GTTTTATTTTTCTCAGCAACTTGTAGATGGAACTAGAAGATTAAGTAGCAGTGAGCAAAACAGA
GAAATATATGTGGAGCTTTCTACTTTGTTCTCCTCGAAAATTATTAACTTAAGCTGCCCAAGCT
TTGAGAGGTGCTCTAAAAAAGATGCTCGTAAGAACATGAAAGTTCTGGCATCACATTCTGTGTA
TCTTCTTTCTACTGTCACAGATTATTTTCTAGATTCTTCACCAGAGAAGCGTTCTCATTTGAAG
GTGTGTCACTTAATATTTCTAATTATTATCAGTTGATGAGCATGTTAGATGTCTTCAAACCAAT
TAAGTCTAAAAAACCCCTACTTAAATCAGTCACGGACGGACTCACATATTGAAACATTACTGTA
TTTTCTATTATTTGGCATTTGAAGTTTGATTGATCTATGCACATTAGAGTACCACTGATTTAAA
TGAGGTTTTGTGTCACAAACTTGAGAAAGGCTTAACGCCGCTTGATGCAGCCCAATATTGACTG
CTGCAGGCTGTGCCCTACACAATTAAAGAGAGATTATATTAGTAGAACATGGTTATTTTGTTGT
GTTTGTACTTTTTTACTATCATTTAACCATGTTTGGTTGATATAGATAAAACCAATAAAGGTGT
ATCAGGGATGAGTTATATAAGTAAATTTTATAAATGCACTTTTGCATATTATTATCAATACATA
AGAAAAGGAACCACAACCTTATTTCTTCTCAGCAAGGCGCACTCAAATGACTAAATAGCAAATA
CCAAGTGAAAAATGTCTGAGAGATTAATATCCTGGTCCAGTTGGTTATTCCATATCCATGTGCA
CGGTGTGCCCATGAATGGCTCAGTCCAATGGCACTGAATACTTGTTACAGTTGGTTTGATACTT
TGATGCACTGTATTCTTGTAGTGTATATTAACAAAATACAGTTTTACCTTGAATACATGATTTC
TCCAACTTCCTTAGCTGTTTGTACCTGGGAGAGGTTGAGCTGTACTAGTTGTGTCAGTAAATTA
GGTTATGTACCCTTTGCTCTAGCACACCTTCTATTTATCCCTGAAAACAACATTAGTTTTTAGA
CTACATATTGCACAATATTTATCATATCATCTTTGTCTTCTTGCAGGATGCATTGAGATGTTTG
GCTCAACTTTCTGGTAGCACGAACATTTGCAACCTTTTCCTTTCACTGGTTAAAAGATTTGGTT
TAGAAGATACTCAGTCAGAGCAAGAGAATATTGAATGCCAAACTAATGAGGTAGACAAGAAGGA
TGAAGAGGGTACTGATGTAGATGAGGAGAAAAATAAAAAGAGGTCTGCTATTATTCCTTTATGC
ATCTATGATGTTTGTTTTCAATGTAGGTTACTCATTCTGTAGAAAAAGAACATAAACCATCAAA
CTTGCCTGGCTCTCAGCGGTACCTTTTTAATTCTTTTTGGTTTGAACCATATAAGCAATTACTC
CTATTAATGTTAGGGAAATGCTCATTAAATTTGCATTCTAGGATGATATTTATCAACAAACCTA
TTCAAATTGCATGCCCTACATTTTTCAATGGTGGGACTATATGATTATTTCCGTCATCATGTAT
TGATTCACACATGGTTACTTTCTGCTAGCGTGTGTGTATTATACATGGTATGATTGTAACTCTA
CTTGTGTAGGTCTCTTGTAATGGAACTTATTTCGACATTCGCTGAAGCTGCTGACGAGGATCTG
CTTGATTTGCTTTTTGGATTTGTCAAATCTTCTTTACTGGTACAGCTTATTAATTTGTTCTCTT
GTTAACCCAACTCTTATCGGAGCATTCATGCTCATACCAGTTTATCTGTTCTTCACAGAACAAC
AAGCAACCTTGTGAGGGCAAAGCTCTATTTGCTCTAAGCATAATTTTGAAGGTCAGTATGACTG
TGTGGGACCCTCTTGCGTAATTTTTATGACTATGCTTTTTCTTATTAGCCACCATCCCTTTCTT
CTTTTTTTCAGGAACACAATGAATATTCTTTGGCTCGGTTGGATGAAATAATGATGCTTCTTCA
TGGAATAAAGGCAGACTTGGATAATGAAGTTTTAGAAGGCCAATTATTATGCTACCAGTATTTG
TTGGTTCACATGATTAAGGTAGGTTTGACAGGTTTTCCCCCCTCTTGCAATAATCTTTGATGTA
GCACATTATCTAGATCTTTCCTTTTTGATGACTTGGATTGTGGAATTTCAAGGTTGTTCTATGT
TGATCTCTGAACCATTGTGCAGAAGCCAAAGCCTCACACCTTGTTTGCCCTGAATAGAAAGCAT
CTGTTGTAGCAAAAGAACATGTTGTTCTGCCTGCATGTCATGTTTAGTACTTGGAGAGTTTTGT
TGTTTAGTCAATTTGTACTGTTCGCGCATAAACATGTAAATTATATCCTACTTGGTGCTAATAT
AATATCCATACATTGAAATTTCAGTTAAGTAATTAAACAATTTGTTCACATCTACTTCAAAGCA
GCAAAATTTTATATGTCTAATAATATAAATGCTCAGAACTATTCAACTTAAATTGCACAGAAAG
TAGACCTCTAGAATGTATGTAATTGCTATAACTGTAATAAACACACGACTAGAAAATATCAAAG
CACTACAATATCTGTGGTAGCTAGAGGTGCATTGTACATCTATAAATATTTCTTTGAACTGATT
ATAATAACATAATGGATTAGTTCGGATGTCTTCTGGATTGGATGAGTCTACTGCAAAGAGAGTA
TTGAACCATCAACACTTTGATGGCATTTATCCCACCTTGTCTATGATGTGTACCTATAGTCTAG
TTCTATGCTATTTTGGTTTGATGTTACCAATCCTGCTTGTATATTTATGTAATGTATGTTTGTC
TGACTTCTTTTCTGCGTTGTAAGGCTAATGAAGAGAACACGAGCAAGAAGGCGTTCCTGATTCT
AAACGAGTTAATAGTCGCGTTGAAGGTTTATTCCCTACCTTTTTTTATCAGTTACCAATTATGT
ATCAGGAGGATATATCATGTCAGTCACAAGCCTTTTGCTATTAGATGGATAGTTTTCCTCTTTC
AAAAACTTAAAAGCAAGGTTCTTAAAATATACACACGACCACTGATGACAATTGTTCTTGCCCT
GCTGTCATCATCTGCTTTATTTTATCCTGACCCACCTTTTCTCCGTACGCAGTCCAAGAAGGAA
AGTAGAAGATTGGCATATGATGTACTCCTGGCTATTAGTAATAGCTTGAGAAGCTCTGAGTCAA
ACAGTGAAGATTCAGATCTTCAACGACTATTCACAATG
						
					

			
		

Sequences
Splice junction sequence	TAGAAGATTGGCATATGATGTACTCCTGGCTATTAGTAATAGCTTGAGAAGCTCTGAGTCAAAC AGTGAAGATTCAGATCTTCAACGACTATTCACAATGgttgaagagtgcattggggcagctgtca ttgctttggggccagataaaatcctttcactaattccaataggttttgatgaggaccggctaac atgctcaa
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	GTTGAAGAGTGCATTGGGGCAGCTGTCATTGCTTTGGGGCCAGATAAAATCCTTTCACTAATTC CAATAGGTTTTGATGAGGACCGGCTAACATGCTCAAATACTTGGCTTCTGCCCATTTTAGATAA GTATATCTATGGGGCCTCACCACAACAATTCCTAGAGCGCATTGTACCTCTAGCAGAATCTGTA CAACAAGCTTCTAACATGGGTAGGTAAAGCCAATTCATTAGGTCTTAAATACATACGCAACATG ATTTCCTAACCTTCTGCTTTAACTTCAGCCAAGTCAGCACGGAAATGTGAAGACTTGAAATCAT GTTCCAATCAGCTGTGGAATTTGCTTCCTGCCTTCTGCCGCTACCCAGTTGATATATGTCAGAA TTTCGGTTCTCTATCCAAGTTGCTACTAGAGATGTTGAAATGTGACAAGTATCTGTACAAATCC GCTGTTAAAGCCCTGCAGGTGCAGTTTTCATTTACAGATATACTGCATTTTTCTTATCTTATCT ATACTCATTTTCTTTCTGGAATTTCGAACTACAAGGCTGCTCCATGTCTTCTCTCAGACAACAT GTTTTATTTTTCTCAGCAACTTGTAGATGGAACTAGAAGATTAAGTAGCAGTGAGCAAAACAGA GAAATATATGTGGAGCTTTCTACTTTGTTCTCCTCGAAAATTATTAACTTAAGCTGCCCAAGCT TTGAGAGGTGCTCTAAAAAAGATGCTCGTAAGAACATGAAAGTTCTGGCATCACATTCTGTGTA TCTTCTTTCTACTGTCACAGATTATTTTCTAGATTCTTCACCAGAGAAGCGTTCTCATTTGAAG GTGTGTCACTTAATATTTCTAATTATTATCAGTTGATGAGCATGTTAGATGTCTTCAAACCAAT TAAGTCTAAAAAACCCCTACTTAAATCAGTCACGGACGGACTCACATATTGAAACATTACTGTA TTTTCTATTATTTGGCATTTGAAGTTTGATTGATCTATGCACATTAGAGTACCACTGATTTAAA TGAGGTTTTGTGTCACAAACTTGAGAAAGGCTTAACGCCGCTTGATGCAGCCCAATATTGACTG CTGCAGGCTGTGCCCTACACAATTAAAGAGAGATTATATTAGTAGAACATGGTTATTTTGTTGT GTTTGTACTTTTTTACTATCATTTAACCATGTTTGGTTGATATAGATAAAACCAATAAAGGTGT ATCAGGGATGAGTTATATAAGTAAATTTTATAAATGCACTTTTGCATATTATTATCAATACATA AGAAAAGGAACCACAACCTTATTTCTTCTCAGCAAGGCGCACTCAAATGACTAAATAGCAAATA CCAAGTGAAAAATGTCTGAGAGATTAATATCCTGGTCCAGTTGGTTATTCCATATCCATGTGCA CGGTGTGCCCATGAATGGCTCAGTCCAATGGCACTGAATACTTGTTACAGTTGGTTTGATACTT TGATGCACTGTATTCTTGTAGTGTATATTAACAAAATACAGTTTTACCTTGAATACATGATTTC TCCAACTTCCTTAGCTGTTTGTACCTGGGAGAGGTTGAGCTGTACTAGTTGTGTCAGTAAATTA GGTTATGTACCCTTTGCTCTAGCACACCTTCTATTTATCCCTGAAAACAACATTAGTTTTTAGA CTACATATTGCACAATATTTATCATATCATCTTTGTCTTCTTGCAGGATGCATTGAGATGTTTG GCTCAACTTTCTGGTAGCACGAACATTTGCAACCTTTTCCTTTCACTGGTTAAAAGATTTGGTT TAGAAGATACTCAGTCAGAGCAAGAGAATATTGAATGCCAAACTAATGAGGTAGACAAGAAGGA TGAAGAGGGTACTGATGTAGATGAGGAGAAAAATAAAAAGAGGTCTGCTATTATTCCTTTATGC ATCTATGATGTTTGTTTTCAATGTAGGTTACTCATTCTGTAGAAAAAGAACATAAACCATCAAA CTTGCCTGGCTCTCAGCGGTACCTTTTTAATTCTTTTTGGTTTGAACCATATAAGCAATTACTC CTATTAATGTTAGGGAAATGCTCATTAAATTTGCATTCTAGGATGATATTTATCAACAAACCTA TTCAAATTGCATGCCCTACATTTTTCAATGGTGGGACTATATGATTATTTCCGTCATCATGTAT TGATTCACACATGGTTACTTTCTGCTAGCGTGTGTGTATTATACATGGTATGATTGTAACTCTA CTTGTGTAGGTCTCTTGTAATGGAACTTATTTCGACATTCGCTGAAGCTGCTGACGAGGATCTG CTTGATTTGCTTTTTGGATTTGTCAAATCTTCTTTACTGGTACAGCTTATTAATTTGTTCTCTT GTTAACCCAACTCTTATCGGAGCATTCATGCTCATACCAGTTTATCTGTTCTTCACAGAACAAC AAGCAACCTTGTGAGGGCAAAGCTCTATTTGCTCTAAGCATAATTTTGAAGGTCAGTATGACTG TGTGGGACCCTCTTGCGTAATTTTTATGACTATGCTTTTTCTTATTAGCCACCATCCCTTTCTT CTTTTTTTCAGGAACACAATGAATATTCTTTGGCTCGGTTGGATGAAATAATGATGCTTCTTCA TGGAATAAAGGCAGACTTGGATAATGAAGTTTTAGAAGGCCAATTATTATGCTACCAGTATTTG TTGGTTCACATGATTAAGGTAGGTTTGACAGGTTTTCCCCCCTCTTGCAATAATCTTTGATGTA GCACATTATCTAGATCTTTCCTTTTTGATGACTTGGATTGTGGAATTTCAAGGTTGTTCTATGT TGATCTCTGAACCATTGTGCAGAAGCCAAAGCCTCACACCTTGTTTGCCCTGAATAGAAAGCAT CTGTTGTAGCAAAAGAACATGTTGTTCTGCCTGCATGTCATGTTTAGTACTTGGAGAGTTTTGT TGTTTAGTCAATTTGTACTGTTCGCGCATAAACATGTAAATTATATCCTACTTGGTGCTAATAT AATATCCATACATTGAAATTTCAGTTAAGTAATTAAACAATTTGTTCACATCTACTTCAAAGCA GCAAAATTTTATATGTCTAATAATATAAATGCTCAGAACTATTCAACTTAAATTGCACAGAAAG TAGACCTCTAGAATGTATGTAATTGCTATAACTGTAATAAACACACGACTAGAAAATATCAAAG CACTACAATATCTGTGGTAGCTAGAGGTGCATTGTACATCTATAAATATTTCTTTGAACTGATT ATAATAACATAATGGATTAGTTCGGATGTCTTCTGGATTGGATGAGTCTACTGCAAAGAGAGTA TTGAACCATCAACACTTTGATGGCATTTATCCCACCTTGTCTATGATGTGTACCTATAGTCTAG TTCTATGCTATTTTGGTTTGATGTTACCAATCCTGCTTGTATATTTATGTAATGTATGTTTGTC TGACTTCTTTTCTGCGTTGTAAGGCTAATGAAGAGAACACGAGCAAGAAGGCGTTCCTGATTCT AAACGAGTTAATAGTCGCGTTGAAGGTTTATTCCCTACCTTTTTTTATCAGTTACCAATTATGT ATCAGGAGGATATATCATGTCAGTCACAAGCCTTTTGCTATTAGATGGATAGTTTTCCTCTTTC AAAAACTTAAAAGCAAGGTTCTTAAAATATACACACGACCACTGATGACAATTGTTCTTGCCCT GCTGTCATCATCTGCTTTATTTTATCCTGACCCACCTTTTCTCCGTACGCAGTCCAAGAAGGAA AGTAGAAGATTGGCATATGATGTACTCCTGGCTATTAGTAATAGCTTGAGAAGCTCTGAGTCAA ACAGTGAAGATTCAGATCTTCAACGACTATTCACAATG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS

Conservation Information
Conserved circRNAs	NA
PMCS

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							46275475-46279216(-)
46275563-46279229(+)
						
					

						Potential amino acid sequence
						
							MGRSQVFEHVSRSSSKPIGISERILSGPKAMTAAPMHSSTIVNSR*(-)
MAKSARKCEDLKSCSNQLWNLLPAFCRYPVDICQNFGSLSKLLLEMLKCDKYLYKSAVKALQQL
VDGTRRLSSSEQNREIYVELSTLFSSKIINLSCPSFERCSKKDARKNMKVLASHSVYLLSTVTD
YFLDSSPEKRSHLKDALRCLAQLSGSTNICNLFLSLVKRFGLEDTQSEQENIECQTNEVDKKDE
EGTDVDEEKNKKRSLVMELISTFAEAADEDLLDLLFGFVKSSLLNNKQPCEGKALFALSIILKE
HNEYSLARLDEIMMLLHGIKADLDNEVLEGQLLCYQYLLVHMIKANEENTSKKAFLILNELIVA
LKSKKESRRLAYDVLLAISNSLRSSESNSEDSDLQRLFTMVEECIGAAVIALGPDKILSLIPIG
FDEDRLTCSNTWLLPILDKYIYGASPQQFLERIVPLAESVQQASNMAKSARKCEDLKSCSNQLW
NLLPAFCRYPVDICQNFGSLSKLLLEMLKCDKYLYKSAVKALQQLVDGTRRLSSSEQNREIYVE
LSTLFSSKIINLSCPSFERCSKKDARKNMKVLASHSVYLLSTVTDYFLDSSPEKRSHLKDALRC
LAQLSGSTNICNLFLSLVKRFGLEDTQSEQENIECQTNEVDKKDEEGTDVDEEKNKKRSLVMEL
ISTFAEAADEDLLDLLFGFVKSSLLNNKQPCEGKALFALSIILKEHNEYSLARLDEIMMLLHGI
KADLDNEVLEGQLLCYQYLLVHMIKANEENTSKKAFLILNELIVALKSKKESRRLAYDVLLAIS
NSLRSSESNSEDSDLQRLFTMVEECIGAAVIALGPDKILSLIPIGFDEDRLTCSNTWLLPILDK
YIYGASPQQFLERIVPLAESVQQASNMAKSARKCEDLKSCSNQLWNLLPAFCRYPVDICQNFGS
LSKLLLEMLKCDKYLYKSAVKALQQLVDGTRRLSSSEQNREIYVELSTLFSSKIINLSCPSFER
CSKKDARKNMKVLASHSVYLLSTVTDYFLDSSPEKRSHLKDALRCLAQLSGSTNICNLFLSLVK
RFGLEDTQSEQENIECQTNEVDKKDEEGTDVDEEKNKKRSLVMELISTFAEAADEDLLDLLFGF
VKSSLLNNKQPCEGKALFALSIILKEHNEYSLARLDEIMMLLHGIKADLDNEVLEGQLLCYQYL
LVHMIKANEENTSKKAFLILNELIVALKSKKESRRLAYDVLLAISNSLRSSESNSEDSDLQRLF
TMVEECIGAAVIALGPDKILSLIPIGFDEDRLTCSNTWLLPILDKYIYGASPQQFLERIVPLAE
SVQQASNMAKSARKCEDLKSCSNQLWNLLPAFCRYPVDICQNFGSLSKLLLEMLKCDKYLYKSA
VKALQQLVDGTRRLSSSEQNREIYVELSTLFSSKIINLSCPSFERCSKKDARKNMKVLASHSVY
LLSTVTDYFLDSSPEKRSHLKDALRCLAQLSGSTNICNLFLSLVKRFGLEDTQSEQENIECQTN
EVDKKDEEGTDVDEEKNKKRSLVMELISTFAEAADEDLLDLLFGFVKSSLLNNKQPCEGKALFA
LSIILKEHNEYSLARLDEIMMLLHGIKADLDNEVLEGQLLCYQYLLVHMIKANEENTSKKAFLI
LNELIVALKSKKESRRLAYDVLLAISNSLRSSESNSEDSDLQRLFTM(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	46275475-46279216(-) 46275563-46279229(+)
Potential amino acid sequence	MGRSQVFEHVSRSSSKPIGISERILSGPKAMTAAPMHSSTIVNSR*(-) MAKSARKCEDLKSCSNQLWNLLPAFCRYPVDICQNFGSLSKLLLEMLKCDKYLYKSAVKALQQL VDGTRRLSSSEQNREIYVELSTLFSSKIINLSCPSFERCSKKDARKNMKVLASHSVYLLSTVTD YFLDSSPEKRSHLKDALRCLAQLSGSTNICNLFLSLVKRFGLEDTQSEQENIECQTNEVDKKDE EGTDVDEEKNKKRSLVMELISTFAEAADEDLLDLLFGFVKSSLLNNKQPCEGKALFALSIILKE HNEYSLARLDEIMMLLHGIKADLDNEVLEGQLLCYQYLLVHMIKANEENTSKKAFLILNELIVA LKSKKESRRLAYDVLLAISNSLRSSESNSEDSDLQRLFTMVEECIGAAVIALGPDKILSLIPIG FDEDRLTCSNTWLLPILDKYIYGASPQQFLERIVPLAESVQQASNMAKSARKCEDLKSCSNQLW NLLPAFCRYPVDICQNFGSLSKLLLEMLKCDKYLYKSAVKALQQLVDGTRRLSSSEQNREIYVE LSTLFSSKIINLSCPSFERCSKKDARKNMKVLASHSVYLLSTVTDYFLDSSPEKRSHLKDALRC LAQLSGSTNICNLFLSLVKRFGLEDTQSEQENIECQTNEVDKKDEEGTDVDEEKNKKRSLVMEL ISTFAEAADEDLLDLLFGFVKSSLLNNKQPCEGKALFALSIILKEHNEYSLARLDEIMMLLHGI KADLDNEVLEGQLLCYQYLLVHMIKANEENTSKKAFLILNELIVALKSKKESRRLAYDVLLAIS NSLRSSESNSEDSDLQRLFTMVEECIGAAVIALGPDKILSLIPIGFDEDRLTCSNTWLLPILDK YIYGASPQQFLERIVPLAESVQQASNMAKSARKCEDLKSCSNQLWNLLPAFCRYPVDICQNFGS LSKLLLEMLKCDKYLYKSAVKALQQLVDGTRRLSSSEQNREIYVELSTLFSSKIINLSCPSFER CSKKDARKNMKVLASHSVYLLSTVTDYFLDSSPEKRSHLKDALRCLAQLSGSTNICNLFLSLVK RFGLEDTQSEQENIECQTNEVDKKDEEGTDVDEEKNKKRSLVMELISTFAEAADEDLLDLLFGF VKSSLLNNKQPCEGKALFALSIILKEHNEYSLARLDEIMMLLHGIKADLDNEVLEGQLLCYQYL LVHMIKANEENTSKKAFLILNELIVALKSKKESRRLAYDVLLAISNSLRSSESNSEDSDLQRLF TMVEECIGAAVIALGPDKILSLIPIGFDEDRLTCSNTWLLPILDKYIYGASPQQFLERIVPLAE SVQQASNMAKSARKCEDLKSCSNQLWNLLPAFCRYPVDICQNFGSLSKLLLEMLKCDKYLYKSA VKALQQLVDGTRRLSSSEQNREIYVELSTLFSSKIINLSCPSFERCSKKDARKNMKVLASHSVY LLSTVTDYFLDSSPEKRSHLKDALRCLAQLSGSTNICNLFLSLVKRFGLEDTQSEQENIECQTN EVDKKDEEGTDVDEEKNKKRSLVMELISTFAEAADEDLLDLLFGFVKSSLLNNKQPCEGKALFA LSIILKEHNEYSLARLDEIMMLLHGIKADLDNEVLEGQLLCYQYLLVHMIKANEENTSKKAFLI LNELIVALKSKKESRRLAYDVLLAISNSLRSSESNSEDSDLQRLFTM(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Huang et al., 2021

circRNA

Detail information of BGIOSGA005211_circ_g.4

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