Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT5G01010_circ_g.6 |
ID in PlantcircBase | ath_circ_035812 |
Alias | At_ciR3647 |
Organism | Arabidpsis thaliana |
Position | chr5: 3927-4258 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | find_circ, CIRI-full |
Parent gene | AT5G01010 |
Parent gene annotation |
GOLD (InterPro:IPR009038) |
Parent gene strand | - |
Alternative splicing | AT5G01010_circ_g.1 AT5G01010_circ_g.2 AT5G01010_circ_g.3 AT5G01010_circ_g.4 AT5G01010_circ_g.5 AT5G01010_circ_g.7 AT5G01010_circ_g.8 |
Support reads | 2 |
Tissues | leaf |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT5G01010.5:2 AT5G01010.3:2 AT5G01010.2:2 AT5G01010.1:2 AT5G01010.4:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.234779919 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015 |