Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | Zm00001d037196_circ_g.1 |
ID in PlantcircBase | zma_circ_002278 |
Alias | circ1065 |
Organism | Zea mays |
Position | chr6: 115299048-115300038 JBrowse» |
Reference genome | AGPv4.38 |
Type | e-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d037196 |
Parent gene annotation |
Retrovirus-related Pol polyprotein LINE-1 |
Parent gene strand | - |
Alternative splicing | Zm00001d037196_circ_igg.1 Zm00001d001415_circ_ig.1 Zm00001d001415_circ_ig.2 |
Support reads | 2 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-AA |
Number of exons covered | Zm00001d037195_T003:3 Zm00001d037195_T004:3 Zm00001d037196_T003:1 Zm00001d037195_T003:3 Zm00001d037196_T002:1 Zm00001d037196_T004:3 Zm00001d037195_T004:3 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.108251917 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Chen et al., 2017b |