Plant Circular RNA Database

Detail information of Os04g0605500_circ_g.2

			
						 General Information
					
						CircRNA Name
						Os04g0605500_circ_g.2
					
						ID in PlantcircBase
						osa_circ_025106
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr4: 30574504-30579327  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os04g0605500						
					
						Parent gene annotation
						
							P-type IIB Ca(2+) ATPase, Stress tolerance (Os04t0605500-01);Sim
ilar to Calcium-transporting ATPase 8, plasma membrane-type (EC 
3.6.3.8) (Ca(2+)-ATPase isoform 8). (Os04t0605500-02);Similar to
 P-type ATPase (Fragment). (Os04t0605500-03)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os04g0605500_circ_g.1 Os04g0605500_circ_g.3 Os04g0605500_circ_g.4 Os04g0605500_circ_g.5 Os04g0605500_circ_g.6 Os04g0605500_circ_g.7 Os04g0605500_circ_g.8 						
					
						Support reads
						1
					
						Tissues
						shoot
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os04t0605500-01:15
Os04t0605500-03:9
Os04t0605500-02:15

General Information
CircRNA Name	Os04g0605500_circ_g.2
ID in PlantcircBase	osa_circ_025106
Alias	NA
Organism	Oryza sativa
Position	chr4: 30574504-30579327 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os04g0605500
Parent gene annotation	P-type IIB Ca(2+) ATPase, Stress tolerance (Os04t0605500-01);Sim ilar to Calcium-transporting ATPase 8, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 8). (Os04t0605500-02);Similar to P-type ATPase (Fragment). (Os04t0605500-03)
Parent gene strand	-
Alternative splicing	Os04g0605500_circ_g.1 Os04g0605500_circ_g.3 Os04g0605500_circ_g.4 Os04g0605500_circ_g.5 Os04g0605500_circ_g.6 Os04g0605500_circ_g.7 Os04g0605500_circ_g.8
Support reads	1
Tissues	shoot
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os04t0605500-01:15 Os04t0605500-03:9 Os04t0605500-02:15

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ATATAAGCAAACTCTACCTGGCCAGAAGGACAACAAGAACGGCGAGAGCAACAGAAAGTCCAAC
CATTCCAATGAAGGTGGCAACACCGTTCAAGCGAACctgaacagcgttcaggggaacattccca
gaactgacagcagcaacaacgttaataatcaaggctgcaacgttgacggttaactgaaactgta
taaatttc

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTGAACAGCGTTCAGGGGAACATTCCCAGAACTGACAGCAGCAACAACGTTAATAATCAAGGCT
GCAACGTTGACGGTTAACTGAAACTGTATAAATTTCTGAATGTTTGCATAAACCGAGCGACCCC
ATCTGACAACCTAAAAGCGAGAGAAAAGAATACTATAAGTTGCAGTCATGGAAGGCCAATAACA
GAACACAGTGTACATACCCTCACGACCGATGCAAAATTGTCATCCAAGATGATAATATCAGAAC
TCTCCTTGGCAACTTCAGTTCCCTGGATGCCCATGGAGAGACCTATATCTGCCTATTAAGTTCA
GCATTGCATAAGAAAGACTGGATTATGGTTGTTGAACATGAAGATTGTTTCTTTCAAAACATGA
TGGAACATTAGTCGAGAGATAAACCTCATGCAAAGCTGGGGCATCATTTGTGCCATCTCCAGTC
ACAGCAACAACATGACCTCTTTTTCTTAATGCTTTAACAAGTAAAAGCTTGTCATTTGGTGAAG
ACCTCCCCATCACCTGTAACCATTTACATAGGGTATATTTAATTGTCGAGGTGAAGATAGACAA
CATATACTGAACAAAAACCGACCTGGTATAAACTAGGCACTTGAATGCATCTATTCAAGATAAC
AGACTATTGATGTATGCACAAGCATAACACAATAAACATACTCTCCAACAAATTAATAGTTCAA
TATGATTTGGAGAGTTATGTTATAATTAGTTGGATAAGGTGATTGCATATGTTTATTCCTCAGA
AAGACAATGATACAAGTCAAAAAGTTCCAATACAGGACCAGGAGGGTCTAATGTTACGTTATCA
AGAGCCTTAGCCTGCATGTGAACATGTGCCAACTTTTTTCCAAAATGAACCAAGGTCTGTGCAT
AATCTTTGTACATATTGTTTCTACTCGTCTGTAAATGTATAGGAGAAGCCTCTCCTATGGATTA
CCTTTAGAAAAAAAGAAGCTGCTACATTGTAAACAATACACACAACCCGCTGTTTATTTAAAAA
AATGGGATCAACCTAGGAGGTTTCGAACTTGGGTGGTCTAAACATACACCACAACATCAACCAA
CTAAACTAGGTTCAGTTCCTCAACCCACTATTTATTATCAACGCAGGCAAATTAGAAATGTGTC
CTTTATTCGACACAGCTCATGCAAATCATCCGCATTACTCATGGCAACTTTTCTTGTTTGCCAT
GTCATACATCTCCTTCCAAATTCATTGTCCATGATCATGGAAAATGAGAAAGGTTAGCAAGAGA
CAATAGCTTACCAGTTATCAGAAAGTTGGGTGTTGATAGAGCAACATTTCAGGGTATTTTGTGG
CTACTACTACATTATATGCTTGCAGCAGTTTAAAAATACGGTGTTAACAGTGGAGGGTACAGAA
ATGTAGGAAAAACAGTCATACCGAAATCTTTTCTGCAGCTTCTTCCCTTTCTAAATCTGACAGT
GCACGAAAAGCCTTTCCTTCAATAATGACTGGCTCTGACACATTGGGATCAGATAAAATTCCAC
ACTCCAAGGCAATGGCTCTGGCAGTTTGAAGGTTGTCTCCAGTAACCATGCGGACCTAACAATC
CAAAAAGAAATTGAATGTAACTTATCAGATTTATAGCTAACATCCCCTGAAGAAGCGAAGTTAA
GTAACACATCTCTTCTACGTTTTAGTTACTAAGAGATAGCAGAAAGTAATATTACCACTGACTC
ACAGAGCAGGATTACCACAACGCAACATTACCTTAATGCCAGCTGCTGCACATAACCGAACAGA
ATCTTTAACACCCGGGCGGCAAGGATCCTGTGAAGCAATCAAACAAACCAATCAGCAAGTACTT
CCAAATTATAGCAGTTCTACAAGTTTTGCTAGTTTCCAGCACATGGCACAATTGGTAGCATGCT
AAAGTAGTCTGAAAGATCTGTTATTAACAGATTGTCATTATCCAGTACAAGATTGAGTTAGGTA
GACGGCTGTGTGTGTGTGTGTGACAGCTGCAAACACAAATTCTCTGAAACCTCAAGCAGATTAC
TCAAGTGCTTCATGTTGAGCCATCAGTAGTGTTTCATGGTTTATCTCTTGGGTCAGCTGCCTGT
TGTGCTGTTTCCCAGGACTCTGGTCAGTGACTGTTTGGCATAAAAGCGCATGTCTGGAAACTTA
ACTCCCTACAGCTAGTTGTAATCCATCCCGTGTATTCAATCAGAAAACAAGATGGCAATCATAA
ATGCAGTTAGTAATTACAGAGTAGTATCACAGTATGGTGCTGCCAGAACAAGTAAAACTTCTAC
AGTGGTCGTGGTGTAGCACTTTTTCAAAGGGTTCATGGTTGCCGTTTGCACCTGTACTTGTGAG
CTCTGACTACTAGTAACTATCCAACCCAATACCGACAGTGTATTATTTGACAAATTGGCTACAG
GGAACAGAAAAACCATGAAGCATGCAGTCATAGGAGACAAAGAAACGGCACATCTAATCAGAGT
TATGCAGTGAGTATACGAGGAATTGCAATACAGCTCGTGCAGGAGAAATGGAAGGCACAACTAC
CAAAATAATTACTTCAACTGCAGAGTAAAATGTACATTCGCAACTAACCTTTATCCCAACTATG
CCAAGCATAATCAAGTCATCTTCAGGCAATATCCAATCAGCCCTCCGGTCCTCACTTGGGACAT
CAACCATCTCATATGTTCTATAAGCAAAGGCAACACACCGGAGGCTCGAAGCAGCCATATCTTC
TATGAATTTCTTGAATTCACTAATCTGAAGCAACTAATTGTCACCAACAAAACCATAATATGAA
AATAAGTGAATTACAAAAGATTGAATGGATATTTACTTTCTCAGGTGTCATTGAATGCTTTGAA
CCATCTGCAGCAAGCCAGCTTTTGCATGAATCCAAAATAATTTCTGCAGCTCCCTTCCAGTGTA
TGTGTACCTCAGACTCAGAGCCACCCTCCAGAAATATAAAGAAGAGCATTAATAAATCTTGAAA
TGAACAGAGAAAAGTAATGGAGTGAATCAAACAAAACATACTGACAAGCTAACAGAACATTTAT
ATCTGCTTATGGTCAAACTTCTGTGAAATTTTTTCGAGCCTTCAATGCAAGAATGCAAATGCTT
AGGCGTAATTCCAGGTAATAATTAGATATATAAACTTGACAGATATATACTAGGTAAAACAAAC
ATGAAAATGTGGATAAGAAAGTATGCTGCAAAAAGGGAACTGTTTCCAAAATGTCAACAATTTA
ACTAACTAGGACAACATAATTGTCAATAGTTGACTAGGCATGCCAATAGTTGACTAGGCATGCC
ATTTTACATGGTAATGTACCATACACAATAAGAAAAAAAATAGGGGAAGGGGTCTGTCAAAGTT
GCAGATATTATGAATTACCAGATGCACTGCAACCCCGCCTCTTTTTTTCTCTGAGTTGAATGGG
AAAACATGAAGAATAGAGGACTTTGTTCTTGTGTCATTGAATCTCATGCCAAGCTGTGGAAATA
TGAAGAGCATGGTCACCAAACAGAAGGCATACAAAAAATCTAGAATCTGTGATTCAGCTACTAA
AATAGGATTGTATGTGTACCTTCAGCCCCCAAGACAGTATAGCCTTTTCGGTCGGTGATCCAGT
CACCTCTGGATCTTGACCATTCTGCAGAGGTAATTGAATTTAAGCCACTAGTCACCAATTTAAT
CGAGAACATGACAGAAAACAAGTGTTTGGTCTCATGGACAGTAAAAGGTTCTTGTTACATAACC
ACAAAGTTGGGATGATCGGGTGAACACCAACAGGAATTAGAGCAAGAGGGGCAAATGGAATGCA
ACAAGATGCACAGACAAACAAATGCAGAAGTGCTATAAAAGTATAAGTGTAACCTCGGGCTCAA
ATATGCTTCCAGACGTATTCTGAGCAATTCCTTCGACAATCAATGATGAGATTGAAGCAGATAA
CACCTGAACATTATCTGGAGGATCCATTTTCTTTCCACCAAAGTAAGCCTCCACAACAGTCATC
TTAAAATTGACAAGAAATAGGGAATAAGTCGTGGCTGAGCAAATTTCTGGAATCATGGATCATC
TTTGTATCCACCGAAGTGCACAACATTGAGAATATGACAACAGCACCCAACCTGATTCAAAGTC
AGCGTTCCTGTCTTGTCGCTGCAAATTGTTGTGGCTGAACCCATAGTTTCACATGCAGAGAGCC
TCCTGACCTATAAGCATTAACCCACTCAAGAGAATGCATTTTGCAGGAATAACAAGCAAGCACA
ATACCAACAAGCGAGCATACCAGAGCTTTGTCCCTCATCATCTTGCGCATAGAGAAGGCAAGCC
TGACACAGATAAGTACAGGTATTAGGTTGCTGATAAGGGTGCAAAGTAAAATACATTATCAAAT
CACACTTACGTCAACGTGACGGCCAATGGTAACCCTTCAGGAACAGCCACGACAACAATTGTTA
CCTAGTTACATCTCAAGTTGGTAAGATAACAGAAAATGGAAACACCAAAGCATCAGACATGTAC
AATAGAGTCTACACCTACCGCCACTGTAAATATTCCTACTATTCCTCGTATTGTCTGGCCTACA
CCCATTTTTCCTTTCACATATTGCACTGACCCATCAGGGTTATAGGTATGCCCAGTGAAGTACC
TACAGGAAAACAAAGCGACACATATAAATAAATAGACATTTTGTTAAAACAAATATAAGCAAAC
TCTACCTGGCCAGAAGGACAACAAGAACGGCGAGAGCAACAGAAAGTCCAACCATTCCAATGAA
GGTGGCAACACCGTTCAAGCGAAC
						
					

			
		

Sequences
Splice junction sequence	ATATAAGCAAACTCTACCTGGCCAGAAGGACAACAAGAACGGCGAGAGCAACAGAAAGTCCAAC CATTCCAATGAAGGTGGCAACACCGTTCAAGCGAACctgaacagcgttcaggggaacattccca gaactgacagcagcaacaacgttaataatcaaggctgcaacgttgacggttaactgaaactgta taaatttc
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTGAACAGCGTTCAGGGGAACATTCCCAGAACTGACAGCAGCAACAACGTTAATAATCAAGGCT GCAACGTTGACGGTTAACTGAAACTGTATAAATTTCTGAATGTTTGCATAAACCGAGCGACCCC ATCTGACAACCTAAAAGCGAGAGAAAAGAATACTATAAGTTGCAGTCATGGAAGGCCAATAACA GAACACAGTGTACATACCCTCACGACCGATGCAAAATTGTCATCCAAGATGATAATATCAGAAC TCTCCTTGGCAACTTCAGTTCCCTGGATGCCCATGGAGAGACCTATATCTGCCTATTAAGTTCA GCATTGCATAAGAAAGACTGGATTATGGTTGTTGAACATGAAGATTGTTTCTTTCAAAACATGA TGGAACATTAGTCGAGAGATAAACCTCATGCAAAGCTGGGGCATCATTTGTGCCATCTCCAGTC ACAGCAACAACATGACCTCTTTTTCTTAATGCTTTAACAAGTAAAAGCTTGTCATTTGGTGAAG ACCTCCCCATCACCTGTAACCATTTACATAGGGTATATTTAATTGTCGAGGTGAAGATAGACAA CATATACTGAACAAAAACCGACCTGGTATAAACTAGGCACTTGAATGCATCTATTCAAGATAAC AGACTATTGATGTATGCACAAGCATAACACAATAAACATACTCTCCAACAAATTAATAGTTCAA TATGATTTGGAGAGTTATGTTATAATTAGTTGGATAAGGTGATTGCATATGTTTATTCCTCAGA AAGACAATGATACAAGTCAAAAAGTTCCAATACAGGACCAGGAGGGTCTAATGTTACGTTATCA AGAGCCTTAGCCTGCATGTGAACATGTGCCAACTTTTTTCCAAAATGAACCAAGGTCTGTGCAT AATCTTTGTACATATTGTTTCTACTCGTCTGTAAATGTATAGGAGAAGCCTCTCCTATGGATTA CCTTTAGAAAAAAAGAAGCTGCTACATTGTAAACAATACACACAACCCGCTGTTTATTTAAAAA AATGGGATCAACCTAGGAGGTTTCGAACTTGGGTGGTCTAAACATACACCACAACATCAACCAA CTAAACTAGGTTCAGTTCCTCAACCCACTATTTATTATCAACGCAGGCAAATTAGAAATGTGTC CTTTATTCGACACAGCTCATGCAAATCATCCGCATTACTCATGGCAACTTTTCTTGTTTGCCAT GTCATACATCTCCTTCCAAATTCATTGTCCATGATCATGGAAAATGAGAAAGGTTAGCAAGAGA CAATAGCTTACCAGTTATCAGAAAGTTGGGTGTTGATAGAGCAACATTTCAGGGTATTTTGTGG CTACTACTACATTATATGCTTGCAGCAGTTTAAAAATACGGTGTTAACAGTGGAGGGTACAGAA ATGTAGGAAAAACAGTCATACCGAAATCTTTTCTGCAGCTTCTTCCCTTTCTAAATCTGACAGT GCACGAAAAGCCTTTCCTTCAATAATGACTGGCTCTGACACATTGGGATCAGATAAAATTCCAC ACTCCAAGGCAATGGCTCTGGCAGTTTGAAGGTTGTCTCCAGTAACCATGCGGACCTAACAATC CAAAAAGAAATTGAATGTAACTTATCAGATTTATAGCTAACATCCCCTGAAGAAGCGAAGTTAA GTAACACATCTCTTCTACGTTTTAGTTACTAAGAGATAGCAGAAAGTAATATTACCACTGACTC ACAGAGCAGGATTACCACAACGCAACATTACCTTAATGCCAGCTGCTGCACATAACCGAACAGA ATCTTTAACACCCGGGCGGCAAGGATCCTGTGAAGCAATCAAACAAACCAATCAGCAAGTACTT CCAAATTATAGCAGTTCTACAAGTTTTGCTAGTTTCCAGCACATGGCACAATTGGTAGCATGCT AAAGTAGTCTGAAAGATCTGTTATTAACAGATTGTCATTATCCAGTACAAGATTGAGTTAGGTA GACGGCTGTGTGTGTGTGTGTGACAGCTGCAAACACAAATTCTCTGAAACCTCAAGCAGATTAC TCAAGTGCTTCATGTTGAGCCATCAGTAGTGTTTCATGGTTTATCTCTTGGGTCAGCTGCCTGT TGTGCTGTTTCCCAGGACTCTGGTCAGTGACTGTTTGGCATAAAAGCGCATGTCTGGAAACTTA ACTCCCTACAGCTAGTTGTAATCCATCCCGTGTATTCAATCAGAAAACAAGATGGCAATCATAA ATGCAGTTAGTAATTACAGAGTAGTATCACAGTATGGTGCTGCCAGAACAAGTAAAACTTCTAC AGTGGTCGTGGTGTAGCACTTTTTCAAAGGGTTCATGGTTGCCGTTTGCACCTGTACTTGTGAG CTCTGACTACTAGTAACTATCCAACCCAATACCGACAGTGTATTATTTGACAAATTGGCTACAG GGAACAGAAAAACCATGAAGCATGCAGTCATAGGAGACAAAGAAACGGCACATCTAATCAGAGT TATGCAGTGAGTATACGAGGAATTGCAATACAGCTCGTGCAGGAGAAATGGAAGGCACAACTAC CAAAATAATTACTTCAACTGCAGAGTAAAATGTACATTCGCAACTAACCTTTATCCCAACTATG CCAAGCATAATCAAGTCATCTTCAGGCAATATCCAATCAGCCCTCCGGTCCTCACTTGGGACAT CAACCATCTCATATGTTCTATAAGCAAAGGCAACACACCGGAGGCTCGAAGCAGCCATATCTTC TATGAATTTCTTGAATTCACTAATCTGAAGCAACTAATTGTCACCAACAAAACCATAATATGAA AATAAGTGAATTACAAAAGATTGAATGGATATTTACTTTCTCAGGTGTCATTGAATGCTTTGAA CCATCTGCAGCAAGCCAGCTTTTGCATGAATCCAAAATAATTTCTGCAGCTCCCTTCCAGTGTA TGTGTACCTCAGACTCAGAGCCACCCTCCAGAAATATAAAGAAGAGCATTAATAAATCTTGAAA TGAACAGAGAAAAGTAATGGAGTGAATCAAACAAAACATACTGACAAGCTAACAGAACATTTAT ATCTGCTTATGGTCAAACTTCTGTGAAATTTTTTCGAGCCTTCAATGCAAGAATGCAAATGCTT AGGCGTAATTCCAGGTAATAATTAGATATATAAACTTGACAGATATATACTAGGTAAAACAAAC ATGAAAATGTGGATAAGAAAGTATGCTGCAAAAAGGGAACTGTTTCCAAAATGTCAACAATTTA ACTAACTAGGACAACATAATTGTCAATAGTTGACTAGGCATGCCAATAGTTGACTAGGCATGCC ATTTTACATGGTAATGTACCATACACAATAAGAAAAAAAATAGGGGAAGGGGTCTGTCAAAGTT GCAGATATTATGAATTACCAGATGCACTGCAACCCCGCCTCTTTTTTTCTCTGAGTTGAATGGG AAAACATGAAGAATAGAGGACTTTGTTCTTGTGTCATTGAATCTCATGCCAAGCTGTGGAAATA TGAAGAGCATGGTCACCAAACAGAAGGCATACAAAAAATCTAGAATCTGTGATTCAGCTACTAA AATAGGATTGTATGTGTACCTTCAGCCCCCAAGACAGTATAGCCTTTTCGGTCGGTGATCCAGT CACCTCTGGATCTTGACCATTCTGCAGAGGTAATTGAATTTAAGCCACTAGTCACCAATTTAAT CGAGAACATGACAGAAAACAAGTGTTTGGTCTCATGGACAGTAAAAGGTTCTTGTTACATAACC ACAAAGTTGGGATGATCGGGTGAACACCAACAGGAATTAGAGCAAGAGGGGCAAATGGAATGCA ACAAGATGCACAGACAAACAAATGCAGAAGTGCTATAAAAGTATAAGTGTAACCTCGGGCTCAA ATATGCTTCCAGACGTATTCTGAGCAATTCCTTCGACAATCAATGATGAGATTGAAGCAGATAA CACCTGAACATTATCTGGAGGATCCATTTTCTTTCCACCAAAGTAAGCCTCCACAACAGTCATC TTAAAATTGACAAGAAATAGGGAATAAGTCGTGGCTGAGCAAATTTCTGGAATCATGGATCATC TTTGTATCCACCGAAGTGCACAACATTGAGAATATGACAACAGCACCCAACCTGATTCAAAGTC AGCGTTCCTGTCTTGTCGCTGCAAATTGTTGTGGCTGAACCCATAGTTTCACATGCAGAGAGCC TCCTGACCTATAAGCATTAACCCACTCAAGAGAATGCATTTTGCAGGAATAACAAGCAAGCACA ATACCAACAAGCGAGCATACCAGAGCTTTGTCCCTCATCATCTTGCGCATAGAGAAGGCAAGCC TGACACAGATAAGTACAGGTATTAGGTTGCTGATAAGGGTGCAAAGTAAAATACATTATCAAAT CACACTTACGTCAACGTGACGGCCAATGGTAACCCTTCAGGAACAGCCACGACAACAATTGTTA CCTAGTTACATCTCAAGTTGGTAAGATAACAGAAAATGGAAACACCAAAGCATCAGACATGTAC AATAGAGTCTACACCTACCGCCACTGTAAATATTCCTACTATTCCTCGTATTGTCTGGCCTACA CCCATTTTTCCTTTCACATATTGCACTGACCCATCAGGGTTATAGGTATGCCCAGTGAAGTACC TACAGGAAAACAAAGCGACACATATAAATAAATAGACATTTTGTTAAAACAAATATAAGCAAAC TCTACCTGGCCAGAAGGACAACAAGAACGGCGAGAGCAACAGAAAGTCCAACCATTCCAATGAA GGTGGCAACACCGTTCAAGCGAAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.11346354

Conservation Information
Conserved circRNAs	NA
PMCS	0.11346354

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							30579160-30574581(+)
30579296-30574506(-)
						
					

						Potential amino acid sequence
						
							MPSEVPGQKDNKNGESNRKSNHSNEGGNTVQANLNSVQGNIPRTDSSNNVNNQGCNVDG*(+)
MVGLSVALAVLVVLLARYFTGHTYNPDGSVQYVKGKMGVGQTIRGIVGIFTVAVTIVVVAVPEG
LPLAVTLTLAFSMRKMMRDKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYFGGKKMD
PPDNVQVLSASISSLIVEGIAQNTSGSIFEPENGQDPEVTGSPTEKAILSWGLKLGMRFNDTRT
KSSILHVFPFNSEKKRGGVAVHLGGSESEVHIHWKGAAEIILDSCKSWLAADGSKHSMTPEKIS
EFKKFIEDMAASSLRCVAFAYRTYEMVDVPSEDRRADWILPEDDLIMLGIVGIKDPCRPGVKDS
VRLCAAAGIKVRMVTGDNLQTARAIALECGILSDPNVSEPVIIEGKAFRALSDLEREEAAEKIS
VMGRSSPNDKLLLVKALRKRGHVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILD
DNFASVVRVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAVSSGNVPLNAVQVRLNGVATFI
GMVGLSVALAVLVVLLARYFTGHTYNPDGSVQYVKGKMGVGQTIRGIVGIFTVAVTIVVVAVPE
GLPLAVTLTLAFSMRKMMRDKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYFGGKKM
DPPDNVQVLSASISSLIVEGIAQNTSGSIFEPENGQDPEVTGSPTEKAILSWGLKLGMRFNDTR
TKSSILHVFPFNSEKKRGGVAVHLGGSESEVHIHWKGAAEIILDSCKSWLAADGSKHSMTPEKI
SEFKKFIEDMAASSLRCVAFAYRTYEMVDVPSEDRRADWILPEDDLIMLGIVGIKDPCRPGVKD
SVRLCAAAGIKVRMVTGDNLQTARAIALECGILSDPNVSEPVIIEGKAFRALSDLEREEAAEKI
SVMGRSSPNDKLLLVKALRKRGHVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIIL
DDNFASVVRVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAVSSGNVPLNAVQVRLNGVATF
IGMVGLSVALAVLVVLLARYFTGHTYNPDGSVQYVKGKMGVGQTIRGIVGIFTVAVTIVVVAVP
EGLPLAVTLTLAFSMRKMMRDKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYFGGKK
MDPPDNVQVLSASISSLIVEGIAQNTSGSIFEPENGQDPEVTGSPTEKAILSWGLKLGMRFNDT
RTKSSILHVFPFNSEKKRGGVAVHLGGSESEVHIHWKGAAEIILDSCKSWLAADGSKHSMTPEK
ISEFKKFIEDMAASSLRCVAFAYRTYEMVDVPSEDRRADWILPEDDLIMLGIVGIKDPCRPGVK
DSVRLCAAAGIKVRMVTGDNLQTARAIALECGILSDPNVSEPVIIEGKAFRALSDLEREEAAEK
ISVMGRSSPNDKLLLVKALRKRGHVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIII
LDDNFASVVRVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAVSSGNVPLNAVQVRLNGVAT
FIGMVGLSVALAVLVVLLARYFTGHTYNPDGSVQYVKGKMGVGQTIRGIVGIFTVAVTIVVVAV
PEGLPLAVTLTLAFSMRKMMRDKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYFGGK
KMDPPDNVQVLSASISSLIVEGIAQNTSGSIFEPENGQDPEVTGSPTEKAILSWGLKLGMRFND
TRTKSSILHVFPFNSEKKRGGVAVHLGGSESEVHIHWKGAAEIILDSCKSWLAADGSKHSMTPE
KISEFKKFIEDMAASSLRCVAFAYRTYEMVDVPSEDRRADWILPEDDLIMLGIVGIKDPCRPGV
KDSVRLCAAAGIKVRMVTGDNLQTARAIALECGILSDPNVSEPVIIEGKAFRALSDLEREEAAE
KISVMGRSSPNDKLLLVKALRKRGHVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDII
ILDDNFASVVRVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAVSSGNVPLNAVQ(-)
						
					

						Sponge-miRNAs
						
							osa-miR2094-5p 						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	30579160-30574581(+) 30579296-30574506(-)
Potential amino acid sequence	MPSEVPGQKDNKNGESNRKSNHSNEGGNTVQANLNSVQGNIPRTDSSNNVNNQGCNVDG*(+) MVGLSVALAVLVVLLARYFTGHTYNPDGSVQYVKGKMGVGQTIRGIVGIFTVAVTIVVVAVPEG LPLAVTLTLAFSMRKMMRDKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYFGGKKMD PPDNVQVLSASISSLIVEGIAQNTSGSIFEPENGQDPEVTGSPTEKAILSWGLKLGMRFNDTRT KSSILHVFPFNSEKKRGGVAVHLGGSESEVHIHWKGAAEIILDSCKSWLAADGSKHSMTPEKIS EFKKFIEDMAASSLRCVAFAYRTYEMVDVPSEDRRADWILPEDDLIMLGIVGIKDPCRPGVKDS VRLCAAAGIKVRMVTGDNLQTARAIALECGILSDPNVSEPVIIEGKAFRALSDLEREEAAEKIS VMGRSSPNDKLLLVKALRKRGHVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILD DNFASVVRVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAVSSGNVPLNAVQVRLNGVATFI GMVGLSVALAVLVVLLARYFTGHTYNPDGSVQYVKGKMGVGQTIRGIVGIFTVAVTIVVVAVPE GLPLAVTLTLAFSMRKMMRDKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYFGGKKM DPPDNVQVLSASISSLIVEGIAQNTSGSIFEPENGQDPEVTGSPTEKAILSWGLKLGMRFNDTR TKSSILHVFPFNSEKKRGGVAVHLGGSESEVHIHWKGAAEIILDSCKSWLAADGSKHSMTPEKI SEFKKFIEDMAASSLRCVAFAYRTYEMVDVPSEDRRADWILPEDDLIMLGIVGIKDPCRPGVKD SVRLCAAAGIKVRMVTGDNLQTARAIALECGILSDPNVSEPVIIEGKAFRALSDLEREEAAEKI SVMGRSSPNDKLLLVKALRKRGHVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIIL DDNFASVVRVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAVSSGNVPLNAVQVRLNGVATF IGMVGLSVALAVLVVLLARYFTGHTYNPDGSVQYVKGKMGVGQTIRGIVGIFTVAVTIVVVAVP EGLPLAVTLTLAFSMRKMMRDKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYFGGKK MDPPDNVQVLSASISSLIVEGIAQNTSGSIFEPENGQDPEVTGSPTEKAILSWGLKLGMRFNDT RTKSSILHVFPFNSEKKRGGVAVHLGGSESEVHIHWKGAAEIILDSCKSWLAADGSKHSMTPEK ISEFKKFIEDMAASSLRCVAFAYRTYEMVDVPSEDRRADWILPEDDLIMLGIVGIKDPCRPGVK DSVRLCAAAGIKVRMVTGDNLQTARAIALECGILSDPNVSEPVIIEGKAFRALSDLEREEAAEK ISVMGRSSPNDKLLLVKALRKRGHVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIII LDDNFASVVRVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAVSSGNVPLNAVQVRLNGVAT FIGMVGLSVALAVLVVLLARYFTGHTYNPDGSVQYVKGKMGVGQTIRGIVGIFTVAVTIVVVAV PEGLPLAVTLTLAFSMRKMMRDKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYFGGK KMDPPDNVQVLSASISSLIVEGIAQNTSGSIFEPENGQDPEVTGSPTEKAILSWGLKLGMRFND TRTKSSILHVFPFNSEKKRGGVAVHLGGSESEVHIHWKGAAEIILDSCKSWLAADGSKHSMTPE KISEFKKFIEDMAASSLRCVAFAYRTYEMVDVPSEDRRADWILPEDDLIMLGIVGIKDPCRPGV KDSVRLCAAAGIKVRMVTGDNLQTARAIALECGILSDPNVSEPVIIEGKAFRALSDLEREEAAE KISVMGRSSPNDKLLLVKALRKRGHVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDII ILDDNFASVVRVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAVSSGNVPLNAVQ(-)
Sponge-miRNAs	osa-miR2094-5p
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os04g0605500_circ_g.2

Address

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