Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d002663_circ_g.1 |
ID in PlantcircBase | zma_circ_001001 |
Alias | circ2348 |
Organism | Zea mays |
Position | chr2: 18763107-18763456 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d002663 |
Parent gene annotation |
Protein LAZ1 |
Parent gene strand | + |
Alternative splicing | Zm00001d002663_circ_g.2 Zm00001d002663_circ_g.3 Zm00001d002663_circ_g.4 |
Support reads | 4 |
Tissues | seedling leaves |
Exon boundary | No-No |
Splicing signals | GT-TA |
Number of exons covered | Zm00001d002663_T010:1 Zm00001d002663_T009:2 Zm00001d002663_T006:2 Zm00001d002663_T007:1 Zm00001d002663_T004:2 Zm00001d002663_T002:2 Zm00001d002663_T005:2 Zm00001d002663_T008:2 Zm00001d002663_T003:1 Zm00001d002663_T001:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.087858905 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |