Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G04810_circ_g.3 |
ID in PlantcircBase | ath_circ_000705 |
Alias | Ath_circ_FC0178, Ath_circ_FC1472 |
Organism | Arabidpsis thaliana |
Position | chr1: 1352638-1353799 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | CIRCexplorer, PcircRNA_finder |
Parent gene | AT1G04810 |
Parent gene annotation |
26S proteasome non-ATPase regulatory subunit 1 homolog B |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | 18 |
Tissues | whole_plant |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT1G04810.1:4 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.370014501 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017;Chen et al., 2017a |