Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os10g0563700_circ_g.1 |
ID in PlantcircBase | osa_circ_008028 |
Alias | NA |
Organism | Oryza sativa |
Position | chr10: 22260161-22260209 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | e-circRNA |
Identification method | PcircRNA_finder |
Parent gene | Os10g0563700 |
Parent gene annotation |
Similar to Nucleoside diphosphate kinase I (EC 2.7.4.6) (NDK I) (NDP kinase I) (PP18). (Os10t0563700-01) |
Parent gene strand | - |
Alternative splicing | Os10g0563700_circ_g.2 |
Support reads | 1 |
Tissues | seed |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | Os10t0563700-01:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.117346939 |
Functional Information | |
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Coding potential | Y |
Potential coding position |
22260197-22260163(+) |
Potential amino acid sequence |
MTSPIFEVESLLLEAADDLANL*(+) |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |