Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G01090_circ_g.1 |
ID in PlantcircBase | ath_circ_000016 |
Alias | 1:48168-48440 |
Organism | Arabidpsis thaliana |
Position | chr1: 48168-48440 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | find_circ; CIRI2 |
Parent gene | AT1G01090 |
Parent gene annotation |
Pyruvate dehydrogenase E1 component subunit alpha |
Parent gene strand | - |
Alternative splicing | AT1G01090_circ_g.2 |
Support reads | 3 |
Tissues | root |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | AT1G01090.1:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.427293458 |
Functional Information | |
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Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Philips et al., 2020 |