Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d054003_circ_g.1 |
ID in PlantcircBase | zma_circ_001850 |
Alias | circ2320 |
Organism | Zea mays |
Position | chr4: 244912532-244912950 JBrowse» |
Reference genome | AGPv4.38 |
Type | ue-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d054003 |
Parent gene annotation |
Histone acetyltransferase HAC1 |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | 3 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d054003_T025:2 Zm00001d054003_T009:2 Zm00001d054003_T002:2 Zm00001d054003_T005:2 Zm00001d054003_T029:2 Zm00001d054003_T012:2 Zm00001d054003_T048:2 Zm00001d054003_T020:2 Zm00001d054003_T023:2 Zm00001d054003_T006:2 Zm00001d054003_T003:2 Zm00001d054003_T010:2 Zm00001d054003_T021:2 Zm00001d054003_T014:2 Zm00001d054003_T044:2 Zm00001d054003_T018:2 Zm00001d054003_T008:2 Zm00001d054003_T042:2 Zm00001d054003_T017:2 Zm00001d054003_T015:2 Zm00001d054003_T004:2 Zm00001d054003_T011:2 Zm00001d054003_T007:2 Zm00001d054003_T013:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.221111874 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |