Plant Circular RNA Database

Detail information of Zm00001d007009_circ_g.1

			
						 General Information
					
						CircRNA Name
						Zm00001d007009_circ_g.1
					
						ID in PlantcircBase
						zma_circ_007391
					
						Alias
						zma_circ_0000933
					
						Organism
						
							Zea mays						
					
						Position
						
							chr2: 220136764-220140741  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Zm00001d007009						
					
						Parent gene annotation
						
							DNAJ heat shock N-terminal domain-containing protein
							
						Parent gene strand
						-
					
						Alternative splicing
						
							NA						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d007009_T002:8
Zm00001d007009_T006:9
Zm00001d007009_T004:6
Zm00001d007009_T003:8
Zm00001d007009_T005:9
Zm00001d007009_T001:9

General Information
CircRNA Name	Zm00001d007009_circ_g.1
ID in PlantcircBase	zma_circ_007391
Alias	zma_circ_0000933
Organism	Zea mays
Position	chr2: 220136764-220140741 JBrowse»
Reference genome	AGPv4.38
Type	e-circRNA
Identification method	find_circ
Parent gene	Zm00001d007009
Parent gene annotation	DNAJ heat shock N-terminal domain-containing protein
Parent gene strand	-
Alternative splicing	NA
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d007009_T002:8 Zm00001d007009_T006:9 Zm00001d007009_T004:6 Zm00001d007009_T003:8 Zm00001d007009_T005:9 Zm00001d007009_T001:9

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CATGAGCAATTGTGAGTAGCCAAAAGCCTAAAAGGTAAAGGTGCTTCAGCAAAAGCTATTCAAC
CTTATGATTGCCACTCTTCCCAATGAATTGGGGGCCctgtcgagtactttgagtgggtgtgttg
ttcctgaaccataatattcccatagaaatacatccgcacataagcaaagttgaaccaatcattg
ggtgggtt

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTGTCGAGTACTTTGAGTGGGTGTGTTGTTCCTGAACCATAATATTCCCATAGAAATACATCCG
CACATAAGCAAAGTTGAACCAATCATTGGGTGGGTTAGGTAATCTTGGAAATGGAAACCGATGT
TCTCTTTTAGACTTTTCCCTGCTGAGCGGATACTTTTAGAATTCCATGCTTTGCTTGTTTCCTC
TGGTACAAGATCTGGCACCTTTGAAGTCTACACGCACAAAAGAGCATTGCAAAGATTAACGATA
TGGGGGATATGGTATACACTTTGTGCAATGTGATTGCCCTGAAAACATTATTTTCAGAAGTGAA
TGCATTTTCGTCCCTGGTACAATCAACGTTAAACCTTAATCGCATATAGTAAGCCATGGTAAAT
TTTTACTGCTAGTGCCAACAAGTTAGATATTCTAGGTGCTTGGGTAGATACAACAGGTGTTCAT
ACAAAAATGGTTAGAGGCAACTTGTATCGACCAAATAATGTTGACTGACTGTTGTCAAAAGCAT
GAGATACATTGGAGAAAAAAGACCGATTCTCGGCTGCAGCGGTAGCTCCAATACTTGAGGAGTG
CTACAACACGATGAAGGAATTTCCAGTGGCCTCAGATTGAGCACTGTGATAGAGAGCAAATCAA
GTTGCCCATGAGCTGGCATGGAAACTTTTATTTCATAAGATTTTTTTTATTTGGGTAGATTCAC
CCCCTAGTTTTCTTTTCCATGTTTTATCAAATGACGTAACACTGTTATCAGATGCATAATAAAG
CTTGCCGAAAGGCTTATATAAAAAAAAGACAGGATCAAGTAAGGCTCTGTTTGGAAGCAACCTA
GTTTTTAAGAATCCAGTTTTTATTTCCAGTTTCTAGAAACGGGTTTATAAAAAAACTGGTTAAT
AATTTTGGAACCACCCCAGCTTTTAATAAACTGGCTTTAGCTAGGGGAGGCTAGCTTCTTGGTT
TTTAAGAAACCGAGAATCCAGTTTCTATAAATTGAGGCATAAACTAGTATGTTTGGAACCACTC
CAGTTTTCATAAACCAGTTTCTTGAAATCTGGGTGCTTCCAAACATGCCCTAAGACAAGCCAAG
CAATTCATTCAGTCATTCTTTGGTCTATGTGAAAGTACATTCCATTTCTTATATATTCTTACCC
CCTTTCATTTATGGATACATGCTGGAGAGTGAAAAGGTAATCTAATTCAAAATCATTAATGGAA
TGAACATTCTTGAAGTCTACATGTCTAGCTAACCTTGTACACAATAACATAAATGTTTTTTCTT
GTAAAACTATCGATTCAACTAGGCAAAGGTCCAGTGCAACATCCTGCAGATTTTTACAAAAAAA
TAATCTTGTATTCCCTACATTCTAAATTATAAGATGTTTTAGCATTTCTAGATACATAGATTTT
GCTATGCGCTTAGATATACACTATGTTTAGATACAGATAAAAAATGTATCTAGAAAAGCCAAAA
CGTCTTATGATTTAGAACAGAGGGAGTAACATGCAAGAGACTTACAAAGTAAGGAATTTCTCTA
GTATCTCCATCTTTGATAATCTGAGAGATCCACCTATTTATCTGGAATATTAGTTAAAAGAGGT
ATAGAATTAGCATTTAGCAGTGATCTTTTAGTGTTGGTGTACCTAACCTGACATAATTATCAGA
AGGCAAAGATAATGCACTAGAAGGTAGGAAACCTTAAATTCTCACCTCTTCAATTTCAACTGGG
CCCTTGTACCTTGCCACTAACTGGGACGCATCAGCATGCTGTCCCTGGAGAACATCCACAAGAT
TGTTCTTTTTTTCAGCTTTCAGTGCCTCATATGTTGCATTTCTTTGGAATCGAACAATAAAAAT
TTCAGGTTTATCATTGTCATCTCCAAAGTCTCGAGGGCCACAGGCTCCAGTATAATCAGTGGCA
AGGTAGAAGGCACAAATTTGCTGTGAAAATATATGTTTATTATGTTATTCGTATTTACAAATAT
AATAAGAGCAATAGAGCTGGTCCTAACAAATCAATCTACACCTGCAAACTAACAAGAAATAACA
TTCCAAACTGGATGTTATCCAATCCCGAAGATGACTAGATAATAAGAGATAAATAGTAAAGTTT
GAAATTATAAAGCAGTCTACCTTTTGTACTTCTCCATCTAACCAAACAAAGGTTAACCTATCAT
CTTTGAAGGCAGTTGCAGCACTTGATGTCTCTACTGAATTGTCAACGTTCCCAGCACTTCTGTC
AACATCACCTAACAATTTGTCTTGAGCCTTCCGCAAAATCTAGTTTCAAATACAAACTAATATG
CTTAGCAAACTAGTAATGAAGCTTATTCAGATACCATACCAATTTGCGCATTACAATTAACTAT
GAAAACTTACTTGTCTCTTCTTGCTTAATTCTGCACCTGGACGACCAGCAACAATTACACAATA
CCAAATTGCTGCATCATTGCCAGCACGTGAATGACCTCTAGCATCACAACCCAGTTCCAAAGAT
GTGTCACTTCTTAGCTGTCGCAGTTCTAAACAAGAAGTCAAGAACAGTAAAGGAGTGAATGTGG
TGATAAAGAAATGTTTTGTTTCATTTAAGGAAACTGCAACCTAAACAATATTACACAGCTTGAC
AATTCAGTGCAATTGGTTCAGAAACTGTTCAACAATACCATGGTGCTTGTGCTCCTCCATCATC
TCTATGAACTCTGACTTGCTAAAAATTCCTGATTGGGAGGTCAACAATCAGCATAACTTCCTTC
CGCATTAAAAAAACAAACTTAAGGGGGGAGGAATCTTGCCATGGTGTACAAAAGGCGTTGTGCC
TGGCCCCTTCAAGAAAACAAGTGCTGGAGCCGATTCCACCCCTAACCTGATCCAAAGTAGACAA
GATTGTGTAACCAATTTTACCATGTGTACTAACAGATGGGACCATGGTAATGTTTTGCTTCATT
AAAATGCAGTAGCTCAATGCTCACTGATGTTGAAATCAGTAACTCACATGTTTTTTATGCTAGG
AAGCTAGTATTTATGATATCAGAATTCAATTATCAGACTGTAACACTAACTATCTGATTAATGG
TTTCTCTGGAACCAAAAAATGGGAAACTTTTGAGTCAAGGGAAAAGCAAAGGATCAGGAAATAA
ATCATTGACAAAGTTGAGTTGAGACTATTTTTGAACTTAAGGTTGGATGCACCACCATATGTAA
AACCTACTCGCATGAAATGGTATGTCCGTATGTGCAATAAGACTTCATCAATAAAGATGATCAT
AATAAATACTATATAATACCACCGAAACAATAAAAACGGAAACATGGGAAGGACATGTTCAGGC
AAACAAAAGAAATTTGGTGATTATTATCCAATATATCTAAATAATTCTTAGTTGGAATATATCT
AAATATTATATAATGTCATCTGAGAAAATTTGATGATCAATGACAAGTAGCTAAGTACGAAATA
ATTACTGTAAATAGGAACTGATGACCAATTGTGTAAAATGTGCAGATTCTGCTGAATGAATTTC
TGCAACTAATAGACTTAAATGCTAGTACATCAGCTAATAGACGTAAATTGCATCAGCTAATAAT
TTTTTCATATTTATTTACTCACTATAAAAGTATATATAATATTAAACTGTTATAAACAACTAGC
ATTAATACATTATACAAAAGCATGATTTATAGATAAAAATAAGCTGCACAAAAACTCAGAAAGC
ACATACGAATTCCACCAAATCTGGGATTCGTCTTCTCTCCATAGGACAAATCCAAATGATGAAT
AACTTGAATACTCTTGGGCAGCTTGGCGAACGAATGGAGCAGCACGCTCTCCAGTACTTGAGAA
AAAGATAGTTTTGACCTGCATAATGCATCCAAAGATGGCATGAGCAATTGTGAGTAGCCAAAAG
CCTAAAAGGTAAAGGTGCTTCAGCAAAAGCTATTCAACCTTATGATTGCCACTCTTCCCAATGA
ATTGGGGGCC
						
					

			
		

Sequences
Splice junction sequence	CATGAGCAATTGTGAGTAGCCAAAAGCCTAAAAGGTAAAGGTGCTTCAGCAAAAGCTATTCAAC CTTATGATTGCCACTCTTCCCAATGAATTGGGGGCCctgtcgagtactttgagtgggtgtgttg ttcctgaaccataatattcccatagaaatacatccgcacataagcaaagttgaaccaatcattg ggtgggtt
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTGTCGAGTACTTTGAGTGGGTGTGTTGTTCCTGAACCATAATATTCCCATAGAAATACATCCG CACATAAGCAAAGTTGAACCAATCATTGGGTGGGTTAGGTAATCTTGGAAATGGAAACCGATGT TCTCTTTTAGACTTTTCCCTGCTGAGCGGATACTTTTAGAATTCCATGCTTTGCTTGTTTCCTC TGGTACAAGATCTGGCACCTTTGAAGTCTACACGCACAAAAGAGCATTGCAAAGATTAACGATA TGGGGGATATGGTATACACTTTGTGCAATGTGATTGCCCTGAAAACATTATTTTCAGAAGTGAA TGCATTTTCGTCCCTGGTACAATCAACGTTAAACCTTAATCGCATATAGTAAGCCATGGTAAAT TTTTACTGCTAGTGCCAACAAGTTAGATATTCTAGGTGCTTGGGTAGATACAACAGGTGTTCAT ACAAAAATGGTTAGAGGCAACTTGTATCGACCAAATAATGTTGACTGACTGTTGTCAAAAGCAT GAGATACATTGGAGAAAAAAGACCGATTCTCGGCTGCAGCGGTAGCTCCAATACTTGAGGAGTG CTACAACACGATGAAGGAATTTCCAGTGGCCTCAGATTGAGCACTGTGATAGAGAGCAAATCAA GTTGCCCATGAGCTGGCATGGAAACTTTTATTTCATAAGATTTTTTTTATTTGGGTAGATTCAC CCCCTAGTTTTCTTTTCCATGTTTTATCAAATGACGTAACACTGTTATCAGATGCATAATAAAG CTTGCCGAAAGGCTTATATAAAAAAAAGACAGGATCAAGTAAGGCTCTGTTTGGAAGCAACCTA GTTTTTAAGAATCCAGTTTTTATTTCCAGTTTCTAGAAACGGGTTTATAAAAAAACTGGTTAAT AATTTTGGAACCACCCCAGCTTTTAATAAACTGGCTTTAGCTAGGGGAGGCTAGCTTCTTGGTT TTTAAGAAACCGAGAATCCAGTTTCTATAAATTGAGGCATAAACTAGTATGTTTGGAACCACTC CAGTTTTCATAAACCAGTTTCTTGAAATCTGGGTGCTTCCAAACATGCCCTAAGACAAGCCAAG CAATTCATTCAGTCATTCTTTGGTCTATGTGAAAGTACATTCCATTTCTTATATATTCTTACCC CCTTTCATTTATGGATACATGCTGGAGAGTGAAAAGGTAATCTAATTCAAAATCATTAATGGAA TGAACATTCTTGAAGTCTACATGTCTAGCTAACCTTGTACACAATAACATAAATGTTTTTTCTT GTAAAACTATCGATTCAACTAGGCAAAGGTCCAGTGCAACATCCTGCAGATTTTTACAAAAAAA TAATCTTGTATTCCCTACATTCTAAATTATAAGATGTTTTAGCATTTCTAGATACATAGATTTT GCTATGCGCTTAGATATACACTATGTTTAGATACAGATAAAAAATGTATCTAGAAAAGCCAAAA CGTCTTATGATTTAGAACAGAGGGAGTAACATGCAAGAGACTTACAAAGTAAGGAATTTCTCTA GTATCTCCATCTTTGATAATCTGAGAGATCCACCTATTTATCTGGAATATTAGTTAAAAGAGGT ATAGAATTAGCATTTAGCAGTGATCTTTTAGTGTTGGTGTACCTAACCTGACATAATTATCAGA AGGCAAAGATAATGCACTAGAAGGTAGGAAACCTTAAATTCTCACCTCTTCAATTTCAACTGGG CCCTTGTACCTTGCCACTAACTGGGACGCATCAGCATGCTGTCCCTGGAGAACATCCACAAGAT TGTTCTTTTTTTCAGCTTTCAGTGCCTCATATGTTGCATTTCTTTGGAATCGAACAATAAAAAT TTCAGGTTTATCATTGTCATCTCCAAAGTCTCGAGGGCCACAGGCTCCAGTATAATCAGTGGCA AGGTAGAAGGCACAAATTTGCTGTGAAAATATATGTTTATTATGTTATTCGTATTTACAAATAT AATAAGAGCAATAGAGCTGGTCCTAACAAATCAATCTACACCTGCAAACTAACAAGAAATAACA TTCCAAACTGGATGTTATCCAATCCCGAAGATGACTAGATAATAAGAGATAAATAGTAAAGTTT GAAATTATAAAGCAGTCTACCTTTTGTACTTCTCCATCTAACCAAACAAAGGTTAACCTATCAT CTTTGAAGGCAGTTGCAGCACTTGATGTCTCTACTGAATTGTCAACGTTCCCAGCACTTCTGTC AACATCACCTAACAATTTGTCTTGAGCCTTCCGCAAAATCTAGTTTCAAATACAAACTAATATG CTTAGCAAACTAGTAATGAAGCTTATTCAGATACCATACCAATTTGCGCATTACAATTAACTAT GAAAACTTACTTGTCTCTTCTTGCTTAATTCTGCACCTGGACGACCAGCAACAATTACACAATA CCAAATTGCTGCATCATTGCCAGCACGTGAATGACCTCTAGCATCACAACCCAGTTCCAAAGAT GTGTCACTTCTTAGCTGTCGCAGTTCTAAACAAGAAGTCAAGAACAGTAAAGGAGTGAATGTGG TGATAAAGAAATGTTTTGTTTCATTTAAGGAAACTGCAACCTAAACAATATTACACAGCTTGAC AATTCAGTGCAATTGGTTCAGAAACTGTTCAACAATACCATGGTGCTTGTGCTCCTCCATCATC TCTATGAACTCTGACTTGCTAAAAATTCCTGATTGGGAGGTCAACAATCAGCATAACTTCCTTC CGCATTAAAAAAACAAACTTAAGGGGGGAGGAATCTTGCCATGGTGTACAAAAGGCGTTGTGCC TGGCCCCTTCAAGAAAACAAGTGCTGGAGCCGATTCCACCCCTAACCTGATCCAAAGTAGACAA GATTGTGTAACCAATTTTACCATGTGTACTAACAGATGGGACCATGGTAATGTTTTGCTTCATT AAAATGCAGTAGCTCAATGCTCACTGATGTTGAAATCAGTAACTCACATGTTTTTTATGCTAGG AAGCTAGTATTTATGATATCAGAATTCAATTATCAGACTGTAACACTAACTATCTGATTAATGG TTTCTCTGGAACCAAAAAATGGGAAACTTTTGAGTCAAGGGAAAAGCAAAGGATCAGGAAATAA ATCATTGACAAAGTTGAGTTGAGACTATTTTTGAACTTAAGGTTGGATGCACCACCATATGTAA AACCTACTCGCATGAAATGGTATGTCCGTATGTGCAATAAGACTTCATCAATAAAGATGATCAT AATAAATACTATATAATACCACCGAAACAATAAAAACGGAAACATGGGAAGGACATGTTCAGGC AAACAAAAGAAATTTGGTGATTATTATCCAATATATCTAAATAATTCTTAGTTGGAATATATCT AAATATTATATAATGTCATCTGAGAAAATTTGATGATCAATGACAAGTAGCTAAGTACGAAATA ATTACTGTAAATAGGAACTGATGACCAATTGTGTAAAATGTGCAGATTCTGCTGAATGAATTTC TGCAACTAATAGACTTAAATGCTAGTACATCAGCTAATAGACGTAAATTGCATCAGCTAATAAT TTTTTCATATTTATTTACTCACTATAAAAGTATATATAATATTAAACTGTTATAAACAACTAGC ATTAATACATTATACAAAAGCATGATTTATAGATAAAAATAAGCTGCACAAAAACTCAGAAAGC ACATACGAATTCCACCAAATCTGGGATTCGTCTTCTCTCCATAGGACAAATCCAAATGATGAAT AACTTGAATACTCTTGGGCAGCTTGGCGAACGAATGGAGCAGCACGCTCTCCAGTACTTGAGAA AAAGATAGTTTTGACCTGCATAATGCATCCAAAGATGGCATGAGCAATTGTGAGTAGCCAAAAG CCTAAAAGGTAAAGGTGCTTCAGCAAAAGCTATTCAACCTTATGATTGCCACTCTTCCCAATGA ATTGGGGGCC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.020587756

Conservation Information
Conserved circRNAs	NA
PMCS	0.020587756

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							220140710-220136802(+)
220139452-220136766(-)
220136826-220140709(-)
						
					

						Potential amino acid sequence
						
							MIATLPNELGALSSTLSGCVVPEP*(+)
MMEEHKHHELRQLRSDTSLELGCDARGHSRAGNDAAIWYCVIVAGRPGAELSKKRQILRKAQDK
LLGDVDRSAGNVDNSVETSSAATAFKDDRLTFVWLDGEVQKQICAFYLATDYTGACGPRDFGDD
NDKPEIFIVRFQRNATYEALKAEKKNNLVDVLQGQHADASQLVARYKGPVEIEEINRWISQIIK
DGDTREIPYFTSKVPDLVPEETSKAWNSKSIRSAGKSLKENIGFHFQDYLTHPMIGSTLLMCGC
ISMGILWFRNNTPTQSTRQGPQFIGKSGNHKVKTIFFSSTGERAAPFVRQAAQEYSSYSSFGFV
LWREDESQIWWNSLGVESAPALVFLKGPGTTPFVHHGIFSKSEFIEMMEEHKHHELRQLRSDTS
LELGCDARGHSRAGNDAAIWYCVIVAGRPGAELSKKRQILRKAQDKLLGDVDRSAGNVDNSVET
SSAATAFKDDRLTFVWLDGEVQKQICAFYLATDYTGACGPRDFGDDNDKPEIFIVRFQRNATYE
ALKAEKKNNLVDVLQGQHADASQLVARYKGPVEIEEINRWISQIIKDGDTREIPYFTSKVPDLV
PEETSKAWNSKSIRSAGKSLKENIGFHFQDYLTHPMIGSTLLMCGCISMGILWFRNNTPTQSTR
QGPQFIGKSGNHKVKTIFFSSTGERAAPFVRQAAQEYSSYSSFGFVLWREDESQIWWNSLGVES
APALVFLKGPGTTPFVHHGIFSKSEFIEMMEEHKHHELRQLRSDTSLELGCDARGHSRAGNDAA
IWYCVIVAGRPGAELSKKRQILRKAQDKLLGDVDRSAGNVDNSVETSSAATAFKDDRLTFVWLD
GEVQKQICAFYLATDYTGACGPRDFGDDNDKPEIFIVRFQRNATYEALKAEKKNNLVDVLQGQH
ADASQLVARYKGPVEIEEINRWISQIIKDGDTREIPYFTSKVPDLVPEETSKAWNSKSIRSAGK
SLKENIGFHFQDYLTHPMIGSTLLMCGCISMGILWFRNNTPTQSTRQGPQFIGKSGNHKVKTIF
FSSTGERAAPFVRQAAQEYSSYSSFGFVLWREDESQIWWNSLGVESAPALVFLKGPGTTPFVHH
GIFSKSEFIEMMEEHKHHELRQLRSDTSLELGCDARGHSRAGNDAAIWYCVIVAGRPGAELSKK
RQILRKAQDKLLGDVDRSAGNVDNSVETSSAATAFKDDRLTFVWLDGEVQKQICAFYLATDYTG
ACGPRDFGDDNDKPEIFIVRFQRNATYEALKAEKKNNLVDVLQGQHADASQLVARYKGPVEIEE
INRWISQIIKDGDTREIPYFTSKVPDLVPEETSKAWNSKSIRSAGKSLKENIGFHFQDYLTHPM
IGSTLLMCGCISMGILWFRNNTPTQSTRQ(-)
MYFYGNIMVQEQHTHSKYSTGPPIHWEEWQS*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	220140710-220136802(+) 220139452-220136766(-) 220136826-220140709(-)
Potential amino acid sequence	MIATLPNELGALSSTLSGCVVPEP(+) MMEEHKHHELRQLRSDTSLELGCDARGHSRAGNDAAIWYCVIVAGRPGAELSKKRQILRKAQDK LLGDVDRSAGNVDNSVETSSAATAFKDDRLTFVWLDGEVQKQICAFYLATDYTGACGPRDFGDD NDKPEIFIVRFQRNATYEALKAEKKNNLVDVLQGQHADASQLVARYKGPVEIEEINRWISQIIK DGDTREIPYFTSKVPDLVPEETSKAWNSKSIRSAGKSLKENIGFHFQDYLTHPMIGSTLLMCGC ISMGILWFRNNTPTQSTRQGPQFIGKSGNHKVKTIFFSSTGERAAPFVRQAAQEYSSYSSFGFV LWREDESQIWWNSLGVESAPALVFLKGPGTTPFVHHGIFSKSEFIEMMEEHKHHELRQLRSDTS LELGCDARGHSRAGNDAAIWYCVIVAGRPGAELSKKRQILRKAQDKLLGDVDRSAGNVDNSVET SSAATAFKDDRLTFVWLDGEVQKQICAFYLATDYTGACGPRDFGDDNDKPEIFIVRFQRNATYE ALKAEKKNNLVDVLQGQHADASQLVARYKGPVEIEEINRWISQIIKDGDTREIPYFTSKVPDLV PEETSKAWNSKSIRSAGKSLKENIGFHFQDYLTHPMIGSTLLMCGCISMGILWFRNNTPTQSTR QGPQFIGKSGNHKVKTIFFSSTGERAAPFVRQAAQEYSSYSSFGFVLWREDESQIWWNSLGVES APALVFLKGPGTTPFVHHGIFSKSEFIEMMEEHKHHELRQLRSDTSLELGCDARGHSRAGNDAA IWYCVIVAGRPGAELSKKRQILRKAQDKLLGDVDRSAGNVDNSVETSSAATAFKDDRLTFVWLD GEVQKQICAFYLATDYTGACGPRDFGDDNDKPEIFIVRFQRNATYEALKAEKKNNLVDVLQGQH ADASQLVARYKGPVEIEEINRWISQIIKDGDTREIPYFTSKVPDLVPEETSKAWNSKSIRSAGK SLKENIGFHFQDYLTHPMIGSTLLMCGCISMGILWFRNNTPTQSTRQGPQFIGKSGNHKVKTIF FSSTGERAAPFVRQAAQEYSSYSSFGFVLWREDESQIWWNSLGVESAPALVFLKGPGTTPFVHH GIFSKSEFIEMMEEHKHHELRQLRSDTSLELGCDARGHSRAGNDAAIWYCVIVAGRPGAELSKK RQILRKAQDKLLGDVDRSAGNVDNSVETSSAATAFKDDRLTFVWLDGEVQKQICAFYLATDYTG ACGPRDFGDDNDKPEIFIVRFQRNATYEALKAEKKNNLVDVLQGQHADASQLVARYKGPVEIEE INRWISQIIKDGDTREIPYFTSKVPDLVPEETSKAWNSKSIRSAGKSLKENIGFHFQDYLTHPM IGSTLLMCGCISMGILWFRNNTPTQSTRQ(-) MYFYGNIMVQEQHTHSKYSTGPPIHWEEWQS(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d007009_circ_g.1

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