Detail information of BGIOSGA014744_circ_g.5


General Information
CircRNA Name BGIOSGA014744_circ_g.5
ID in PlantcircBase osi_circ_014564
Alias Chr04:26079172_26079462(ZS97RS2)
Organism Oryza sativa ssp. indica
Position chr4: 24180356-24180646  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   i-circRNA
Identification method CIRCexplorer2, find_circ
Parent gene BGIOSGA014744
Parent gene annotation NA
Parent gene strand -
Alternative splicing NA
Support reads NA
Tissues root, leaf, panicle
Exon boundary   NA-NA
Splicing signals   CT-TA
Number of exons covered 0
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   CAACTAGTTATCTACAAAGCTTCTCTTTCGTTTACAAATACTTTTCATGCTGGAATAATAATTT
GACTGGTCTGCAGAGGTAATGTACTGCAAAGTGTACcagagtagaagaaaagatgaattcaaat
ggattatatttgaaaaaaatgaatacaataatgatatatgtgctgtctacatgttctcggagtc
agacctct
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence CAGAGTAGAAGAAAAGATGAATTCAAATGGATTATATTTGAAAAAAATGAATACAATAATGATA
TATGTGCTGTCTACATGTTCTCGGAGTCAGACCTCTAGTTTCAGAATAAATTAGGCAGGATTAA
GCAGGACCTTTTAGCTGAAGATTCTTCTCCATCGTGTGCATCTTAAATTAGTTTATGATAAGTC
AACTAGTTATCTACAAAGCTTCTCTTTCGTTTACAAATACTTTTCATGCTGGAATAATAATTTG
ACTGGTCTGCAGAGGTAATGTACTGCAAAGTGTAC
Conservation Information
Conserved circRNAs osa_circ_024542
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Zhou et al., 2021