Detail information of Niben101Scf12084g00003_circ_ig.90


General Information
CircRNA Name Niben101Scf12084g00003_circ_ig.90
ID in PlantcircBase nbe_circ_008079
Alias NA
Organism Nicotiana benthamiana
Position chrNiben101Scf12084: 89605-92581  JBrowse»
Reference genome Niben.genome.v1.0.1
Type   ig-circRNA
Identification method DCC
Parent gene NA
Parent gene annotation NA
Parent gene strand NA
Alternative splicing Niben101Scf12084g00003_circ_ig.1 Niben101Scf12084g00003_circ_ig.2 Niben101Scf12084g00003_circ_ig.3 Niben101Scf12084g00003_circ_ig.4 Niben101Scf12084g00003_circ_ig.5 Niben101Scf12084g00003_circ_ig.6 Niben101Scf12084g00003_circ_ig.7 Niben101Scf12084g00003_circ_ig.8 Niben101Scf12084g00003_circ_ig.9 Niben101Scf12084g00003_circ_ig.10 Niben101Scf12084g00003_circ_ig.11 Niben101Scf12084g00003_circ_ig.12 Niben101Scf12084g00003_circ_ig.13 Niben101Scf12084g00003_circ_ig.14 Niben101Scf12084g00003_circ_ig.15 Niben101Scf12084g00003_circ_ig.16 Niben101Scf12084g00003_circ_ig.17 Niben101Scf12084g00003_circ_ig.18 Niben101Scf12084g00003_circ_ig.19 Niben101Scf12084g00003_circ_ig.20 Niben101Scf12084g00003_circ_ig.21 Niben101Scf12084g00003_circ_ig.22 Niben101Scf12084g00003_circ_ig.23 Niben101Scf12084g00003_circ_ig.24 Niben101Scf12084g00003_circ_ig.25 Niben101Scf12084g00003_circ_ig.26 Niben101Scf12084g00003_circ_ig.27 Niben101Scf12084g00003_circ_ig.28 Niben101Scf12084g00003_circ_ig.29 Niben101Scf12084g00003_circ_ig.30 Niben101Scf12084g00003_circ_ig.31 Niben101Scf12084g00003_circ_ig.32 Niben101Scf12084g00003_circ_ig.33 Niben101Scf12084g00003_circ_ig.34 Niben101Scf12084g00003_circ_ig.35 Niben101Scf12084g00003_circ_ig.36 Niben101Scf12084g00003_circ_ig.37 Niben101Scf12084g00003_circ_ig.38 Niben101Scf12084g00003_circ_ig.39 Niben101Scf12084g00003_circ_ig.40 Niben101Scf12084g00003_circ_ig.41 Niben101Scf12084g00003_circ_ig.42 Niben101Scf12084g00003_circ_ig.43 Niben101Scf12084g00003_circ_ig.44 Niben101Scf12084g00003_circ_ig.45 Niben101Scf12084g00003_circ_ig.46 Niben101Scf12084g00003_circ_ig.47 Niben101Scf12084g00003_circ_ig.48 Niben101Scf12084g00003_circ_ig.49 Niben101Scf12084g00003_circ_ig.50 Niben101Scf12084g00003_circ_ig.51 Niben101Scf12084g00003_circ_ig.52 Niben101Scf12084g00003_circ_ig.53 Niben101Scf12084g00003_circ_ig.54 Niben101Scf12084g00003_circ_ig.55 Niben101Scf12084g00003_circ_ig.56 Niben101Scf12084g00003_circ_ig.57 Niben101Scf12084g00003_circ_ig.58 Niben101Scf12084g00003_circ_ig.59 Niben101Scf12084g00003_circ_ig.60 Niben101Scf12084g00003_circ_ig.61 Niben101Scf12084g00003_circ_ig.62 Niben101Scf12084g00003_circ_ig.63 Niben101Scf12084g00003_circ_ig.64 Niben101Scf12084g00003_circ_ig.65 Niben101Scf12084g00003_circ_ig.66 Niben101Scf12084g00003_circ_ig.67 Niben101Scf12084g00003_circ_ig.68 Niben101Scf12084g00003_circ_ig.69 Niben101Scf12084g00003_circ_ig.70 Niben101Scf12084g00003_circ_ig.71 Niben101Scf12084g00003_circ_ig.72 Niben101Scf12084g00003_circ_ig.73 Niben101Scf12084g00003_circ_ig.74 Niben101Scf12084g00003_circ_ig.75 Niben101Scf12084g00003_circ_ig.76 Niben101Scf12084g00003_circ_ig.77 Niben101Scf12084g00003_circ_ig.78 Niben101Scf12084g00003_circ_ig.79 Niben101Scf12084g00003_circ_ig.80 Niben101Scf12084g00003_circ_ig.81 Niben101Scf12084g00003_circ_ig.82 Niben101Scf12084g00003_circ_ig.83 Niben101Scf12084g00003_circ_ig.84 Niben101Scf12084g00003_circ_ig.85 Niben101Scf12084g00003_circ_ig.86 Niben101Scf12084g00003_circ_ig.87 Niben101Scf12084g00003_circ_ig.88 Niben101Scf12084g00003_circ_ig.89 Niben101Scf12084g00003_circ_ig.91 Niben101Scf12084g00003_circ_ig.92 Niben101Scf12084g00003_circ_ig.93 Niben101Scf12084g00003_circ_ig.94 Niben101Scf12084g00003_circ_ig.95 Niben101Scf12084g00003_circ_ig.96 Niben101Scf12084g00003_circ_ig.97 Niben101Scf12084g00003_circ_ig.98 Niben101Scf12084g00003_circ_ig.99 Niben101Scf12084g00003_circ_ig.100 Niben101Scf12084g00003_circ_ig.101 Niben101Scf12084g00003_circ_ig.102 Niben101Scf12084g00003_circ_ig.103 Niben101Scf12084g00003_circ_ig.104 Niben101Scf12084g00003_circ_ig.105 Niben101Scf12084g00003_circ_ig.106 Niben101Scf12084g00003_circ_ig.107 Niben101Scf12084g00003_circ_ig.108 Niben101Scf12084g00003_circ_ig.109 Niben101Scf12084g00003_circ_ig.110 Niben101Scf12084g00003_circ_ig.111 Niben101Scf12084g00003_circ_ig.112 Niben101Scf12084g00003_circ_ig.113 Niben101Scf12084g00003_circ_ig.114 Niben101Scf12084g00003_circ_ig.115 Niben101Scf12084g00003_circ_ig.116 Niben101Scf12084g00003_circ_ig.117 Niben101Scf12084g00003_circ_ig.118 Niben101Scf12084g00003_circ_ig.119 Niben101Scf12084g00003_circ_ig.120 Niben101Scf12084g00003_circ_ig.121 Niben101Scf12084g00003_circ_ig.122 Niben101Scf12084g00003_circ_ig.123 Niben101Scf12084g00003_circ_ig.124 Niben101Scf12084g00003_circ_ig.125 Niben101Scf12084g00003_circ_ig.126 Niben101Scf12084g00003_circ_ig.127 Niben101Scf12084g00003_circ_ig.128 Niben101Scf12084g00003_circ_ig.129 Niben101Scf12084g00003_circ_ig.130 Niben101Scf12084g00003_circ_ig.131 Niben101Scf12084g00003_circ_ig.132 Niben101Scf12084g00003_circ_ig.133 Niben101Scf12084g00003_circ_ig.134 Niben101Scf12084g00003_circ_ig.135 Niben101Scf12084g00003_circ_ig.136 Niben101Scf12084g00003_circ_ig.137 Niben101Scf12084g00003_circ_ig.138 Niben101Scf12084g00003_circ_ig.139 Niben101Scf12084g00003_circ_ig.140 Niben101Scf12084g00003_circ_ig.141 Niben101Scf12084g00003_circ_ig.142 Niben101Scf12084g00003_circ_ig.143 Niben101Scf12084g00003_circ_ig.144 Niben101Scf12084g00003_circ_ig.145 Niben101Scf12084g00003_circ_ig.146 Niben101Scf12084g00003_circ_ig.147 Niben101Scf12084g00003_circ_ig.148 Niben101Scf12084g00003_circ_ig.149 Niben101Scf12084g00003_circ_ig.150 Niben101Scf12084g00003_circ_ig.151 Niben101Scf12084g00003_circ_ig.152 Niben101Scf12084g00003_circ_ig.153 Niben101Scf12084g00003_circ_ig.154 Niben101Scf12084g00003_circ_ig.155 Niben101Scf12084g00003_circ_ig.156 Niben101Scf12084g00003_circ_ig.157 Niben101Scf12084g00003_circ_ig.158 Niben101Scf12084g00003_circ_ig.159 Niben101Scf12084g00003_circ_ig.160 Niben101Scf12084g00003_circ_ig.161 Niben101Scf12084g00003_circ_ig.162 Niben101Scf12084g00003_circ_ig.163 Niben101Scf12084g00003_circ_ig.164 Niben101Scf12084g00003_circ_ig.165 Niben101Scf12084g00003_circ_ig.166 Niben101Scf12084g00003_circ_ig.167 Niben101Scf12084g00003_circ_ig.168 Niben101Scf12084g00003_circ_ig.169 Niben101Scf12084g00003_circ_ig.170 Niben101Scf12084g00003_circ_ig.171 Niben101Scf12084g00003_circ_ig.172 Niben101Scf12084g00003_circ_ig.173 Niben101Scf12084g00003_circ_ig.174 Niben101Scf12084g00003_circ_ig.175 Niben101Scf12084g00003_circ_ig.176 Niben101Scf12084g00003_circ_ig.177 Niben101Scf12084g00003_circ_ig.178 Niben101Scf12084g00003_circ_ig.179 Niben101Scf12084g00003_circ_ig.180 Niben101Scf12084g00003_circ_ig.181 Niben101Scf12084g00003_circ_ig.182 Niben101Scf12084g00003_circ_ig.183 Niben101Scf12084g00003_circ_ig.184 Niben101Scf12084g00003_circ_ig.185 Niben101Scf12084g00003_circ_ig.186 Niben101Scf12084g00003_circ_ig.187 Niben101Scf12084g00003_circ_ig.188 Niben101Scf12084g00003_circ_ig.189 Niben101Scf12084g00003_circ_ig.190 Niben101Scf12084g00003_circ_ig.191 Niben101Scf12084g00003_circ_ig.192 Niben101Scf12084g00003_circ_ig.193 Niben101Scf12084g00003_circ_ig.194 Niben101Scf12084g00003_circ_ig.195 Niben101Scf12084g00003_circ_ig.196 Niben101Scf12084g00003_circ_ig.197 Niben101Scf12084g00003_circ_ig.198 Niben101Scf12084g00003_circ_ig.199 Niben101Scf12084g00003_circ_ig.200 Niben101Scf12084g00003_circ_ig.201 Niben101Scf12084g00003_circ_ig.202 Niben101Scf12084g00003_circ_ig.203 Niben101Scf12084g00003_circ_ig.204 Niben101Scf12084g00003_circ_ig.205 Niben101Scf12084g00003_circ_ig.206 Niben101Scf12084g00003_circ_ig.207 Niben101Scf12084g00003_circ_ig.208 Niben101Scf12084g00003_circ_ig.209 Niben101Scf12084g00003_circ_ig.210 Niben101Scf12084g00003_circ_ig.211 Niben101Scf12084g00003_circ_ig.212 Niben101Scf12084g00003_circ_ig.213 Niben101Scf12084g00003_circ_ig.214 Niben101Scf12084g00003_circ_ig.215 Niben101Scf12084g00003_circ_ig.216 Niben101Scf12084g00003_circ_ig.217 Niben101Scf12084g00003_circ_ig.218 Niben101Scf12084g00003_circ_ig.219 Niben101Scf12084g00003_circ_ig.220 Niben101Scf12084g00003_circ_ig.221 Niben101Scf12084g00003_circ_ig.222 Niben101Scf12084g00003_circ_ig.223 Niben101Scf12084g00003_circ_ig.224 Niben101Scf12084g00003_circ_ig.225 Niben101Scf12084g00003_circ_ig.226 Niben101Scf12084g00003_circ_ig.227 Niben101Scf12084g00003_circ_ig.228 Niben101Scf12084g00003_circ_ig.229 Niben101Scf12084g00003_circ_ig.230 Niben101Scf12084g00003_circ_ig.231 Niben101Scf12084g00003_circ_ig.232 Niben101Scf12084g00003_circ_ig.233 Niben101Scf12084g00003_circ_ig.234 Niben101Scf12084g00003_circ_ig.235 Niben101Scf12084g00003_circ_ig.236 Niben101Scf12084g00003_circ_ig.237 Niben101Scf12084g00003_circ_ig.238 Niben101Scf12084g00003_circ_ig.239 Niben101Scf12084g00003_circ_ig.240 Niben101Scf12084g00003_circ_ig.241 Niben101Scf12084g00003_circ_ig.242 Niben101Scf12084g00003_circ_ig.243 Niben101Scf12084g00003_circ_ig.244 Niben101Scf12084g00003_circ_ig.245 Niben101Scf12084g00003_circ_ig.246 Niben101Scf12084g00003_circ_ig.247 Niben101Scf12084g00003_circ_ig.248 Niben101Scf12084g00003_circ_ig.249 Niben101Scf12084g00003_circ_ig.250 Niben101Scf12084g00003_circ_ig.251 Niben101Scf12084g00003_circ_ig.252 Niben101Scf12084g00003_circ_ig.253 Niben101Scf12084g00003_circ_ig.254 Niben101Scf12084g00003_circ_ig.255 Niben101Scf12084g00003_circ_ig.256 Niben101Scf12084g00003_circ_ig.257 Niben101Scf12084g00003_circ_ig.258 Niben101Scf12084g00003_circ_ig.259 Niben101Scf12084g00003_circ_ig.260 Niben101Scf12084g00003_circ_ig.261 Niben101Scf12084g00003_circ_ig.262 Niben101Scf12084g00003_circ_ig.263 Niben101Scf12084g00003_circ_ig.264 Niben101Scf12084g00003_circ_ig.265 Niben101Scf12084g00003_circ_ig.266 Niben101Scf12084g00003_circ_ig.267 Niben101Scf12084g00003_circ_ig.268 Niben101Scf12084g00003_circ_ig.269 Niben101Scf12084g00003_circ_ig.270 Niben101Scf12084g00003_circ_ig.271 Niben101Scf12084g00003_circ_ig.272 Niben101Scf12084g00003_circ_ig.273 Niben101Scf12084g00003_circ_ig.274 Niben101Scf12084g00003_circ_ig.275 Niben101Scf12084g00003_circ_ig.276 Niben101Scf12084g00003_circ_ig.277 Niben101Scf12084g00003_circ_ig.278 Niben101Scf12084g00003_circ_ig.279 Niben101Scf12084g00003_circ_ig.280 Niben101Scf12084g00003_circ_ig.281 Niben101Scf12084g00003_circ_ig.282 Niben101Scf12084g00003_circ_ig.283 Niben101Scf12084g00003_circ_ig.284 Niben101Scf12084g00003_circ_ig.285 Niben101Scf12084g00003_circ_ig.286 Niben101Scf12084g00003_circ_ig.287 Niben101Scf12084g00003_circ_ig.288 Niben101Scf12084g00003_circ_ig.289 Niben101Scf12084g00003_circ_ig.290 Niben101Scf12084g00003_circ_ig.291 Niben101Scf12084g00003_circ_ig.292 Niben101Scf12084g00003_circ_ig.293 Niben101Scf12084g00003_circ_ig.294 Niben101Scf12084g00003_circ_ig.295 Niben101Scf12084g00003_circ_ig.296 Niben101Scf12084g00003_circ_ig.297 Niben101Scf12084g00003_circ_ig.298 Niben101Scf12084g00003_circ_ig.299 Niben101Scf12084g00003_circ_ig.300 Niben101Scf12084g00003_circ_ig.301 Niben101Scf12084g00003_circ_ig.302 Niben101Scf12084g00003_circ_ig.303 Niben101Scf12084g00003_circ_ig.304 Niben101Scf12084g00003_circ_ig.305 Niben101Scf12084g00003_circ_ig.306 Niben101Scf12084g00003_circ_ig.307 Niben101Scf12084g00003_circ_ig.308 Niben101Scf12084g00003_circ_ig.309 Niben101Scf12084g00003_circ_ig.310 Niben101Scf12084g00003_circ_ig.311 Niben101Scf12084g00003_circ_ig.312 Niben101Scf12084g00003_circ_ig.313 Niben101Scf12084g00003_circ_ig.314 Niben101Scf12084g00003_circ_ig.315 Niben101Scf12084g00003_circ_ig.316 Niben101Scf12084g00003_circ_ig.317 Niben101Scf12084g00003_circ_ig.318 Niben101Scf12084g00003_circ_ig.319 Niben101Scf12084g00003_circ_ig.320 Niben101Scf12084g00003_circ_ig.321 Niben101Scf12084g00003_circ_ig.322 Niben101Scf12084g00003_circ_ig.323
Support reads NA
Tissues leaf
Exon boundary   NA-NA
Splicing signals   TT-AG
Number of exons covered NA
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   TCAGGTCGGGGGTTATTGGGTGTGAGTCTGGCGGAATTTAGAAGGAGAAAGGGGTTAGGGCTGA
TTTAATTGTATATATGGCCCAATTAGGCCCTTTTTAaaaattatcttgaaaacgggttacgagt
acgtattaccgcttgttttgcacgtcatcaatcatttcacgcgaacgtgtccacaattaataac
gcttaatt
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence AAAATTATCTTGAAAACGGGTTACGAGTACGTATTACCGCTTGTTTTGCACGTCATCAATCATT
TCACGCGAACGTGTCCACAATTAATAACGCTTAATTACTATAAAGAAGAGTATGGGCCAAAGTT
GCGCGAACGCATACTCTGATTTTATTCTTATAAGTGTGATTGTATTGCGCGGACGTATACGCAA
TTACATTAGTATTTTAAGCGGCCCTAAAGGATATTTTACGAAATATTATATTTTTATCTAACCT
ACAAAATTACTAAAAGTCCATATGTGATTTAATGAACTTGCGTAAGCTAAAAATAATTAAAATT
TCTAGCCTATTTATTATTAAAAAAATATTAATCGAAGTTGCACGAACGCATACTCCAAATTAAA
TTTATAAGTGTAATTGTGTTACGCGGACGTATACGCAATCACACTAATTATTTTTAAAGACCCT
AAAGGATATTCTACGAGATATTATATTTAACTAACCTAGGAAATTATTAAAGGGCCATGTGTGA
TTATAAGAACTTATGTAAGCTAAAAATAATCAAAACTTGCAACCTATTTTATTACTAAGAAAAG
ATTTGATCGAAGTTGCAGGAACGCATACTCCAAATTAATTTAGAATTATGTTCATGTTACGTGA
ACGTATACACAACCACAATAGGTAGATTAAGAGCATGCCTAAAAAGCATTTCTACGAAGTTTAT
GAATTGTTTACTTCGTATCAACTAGAGTGATCTACAAGGTCCAAAGGTTCATGAAATCCATTTG
GAAGGATGATCCTATTTAAAACTCATCAAAACAAATTAAATCCGTTTGGTTATTTTTTATACGT
TTTGTTAATTACATTCAAAATTTAGAAACAAACCATACCCCCTTCACTGAATGAAGGAATCTGT
CTAATGTGGCAATCATCCAAGCAAATGGAACTAACACTTCACACAGACCTCTCGTTTGAAAACA
ACATCATCTTCCACCTACTGGGTAGCAAAAAGGATTATAGTTTCAATCTAAGAATGAGGCAGAC
TCACTGTTAATCGAGACTTCAGTAGATAAAGCATAATACACTTATTTTACAATCCAACTTAGAG
CCTCGGGAGTGCCACAAAGAACACCTGAAGTAACTCTAAGAGAAAGTTAGCTCTCTGCAAGAGC
TTTTGACAATTCTGCTCATAACAATCAAAGACTAACTAGAACAAGAAGCTCCATAATCTAGTGC
AAGGAGTAGAAGACCTTTTATACAACCTATTATACACTTAATTTGATCAACTTACGGAAAACCT
TATGCATTTAAAAAGAGAGAACAAAAACTTAGAATTTAGAAATGTCATCGAGATAATTTTCTTC
TTTGGACTGGACTACACGGAAGGTTCTCATTGCTAGCTCTAGTATTTCCAAACAATTCTTTGCT
CCCCATTAACTAATACACATGCTGGCAAGTAGATGAATCACATGTTGCTTGTTAAGATCTTACA
ATGAATTAAAGAAAATGTCAATTCTATCTAGAAAACAAGCTTATCGAGCAGGGGAAGACTAACA
ACAGAACAATGGCAAACTCGAGCTTGATCGAACCAAAATAGCATAGTCATGAGAAGCACAAATG
AGCATAGTCATGGAAAGCATAAATGAGCATATTATCGCCTCGTCATTCATTTGGAAACCATACG
ATAGTTTAATTCCAATCGTGAGCTATCAAGAAAAGCTACACATGTCTCACTTTCAACACAGATT
TGGTGATAAATTGATAGAAAATGAATGGTCTCAAATCTCCTAGACAAAGACCCTAATTCAACTC
CCAACAAACATATCGGAACAAAGGTGAAACACTAAGCGCAATGTCGATATAGCAGCCATTCCAA
CCTTCCCAGGGTCGTGTTCACGCTCTAGTAATAGCAAAATCCAAGCACAAGCTGCTATGCTTGT
TCAAAAGATGAAAACAGAACGATTTCTAGAAATCATTCGTATTAGAGAATCAGATAACCAAGTG
GAAACCATGAGTATATACACTACTGATTCAGATTCATTTGACAAACATAAAGTAGAGCAGAACA
TTAAATGAAATCGCAGATAACCACACAAGCCTCATCTATTGTTTTAACTGAAATCGTTTTACAG
TCCATCCATGTCTACCTTCACAACAAAATAAGGAAGAGCAGAATTGAACCTGGGATGAAAATCA
AACTAGTCTCAATACTGAAATCAACACAGAGAAACAATAGTTACGAATCGACGCCTCGAGCAAT
AACGAGTTCACTATCTCTCAATCGAACTCCATTTTTTACAAAATCCAGACTGAAAGAAAAGACG
GAATTCTTATGTTTTGATGCTTGTAAATAATAAACCAAACAACCCTAAAATCACTGAACATTGA
AAATTTTCTGTATTTTTTTCTTTTTCTGAAGTTCAACTAAGAATGAAGGCAAATGATAGGAAGA
AGAAGGCTATCTCTCCAACCCAGATTTTCGAAAACCAAAAAAAACTACATACCTCTCTCCAAAA
AATAATCCTCTAAAACCTGACCCCTCCGAAATCCATCCAAAATCTCTTTTGAGAATGAATTCCT
GATGAATGTGGGGTTTGGATTGAATGAAATCAATCCAACGCCTCACACTCATCCATCAAATCCT
TCTCAAAAGCTTCCAATCGCGTGCCTTATCACTAAATTGAGCGAGTGAAGGGAATGAGAATATT
CGCGTCATAAACGGTTGGAGATGGTGATGAGGAGAGAAGGATGAACGCATGCGGAGGGATTTGA
GACTCGCTTGGATTTGGGATAAACTGAGGCTTGGTTCATGTTCTTCTTTAGAGAAGAACAGTCA
TCTGGTCATTGGTGAGATTAGGGCTTCGTGTATGTATCCGTGTGTGTATTGTTTGAACGGGTCA
GGTCGGGGGTTATTGGGTGTGAGTCTGGCGGAATTTAGAAGGAGAAAGGGGTTAGGGCTGATTT
AATTGTATATATGGCCCAATTAGGCCCTTTTTA
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential NA
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Guria et al., 2019