Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d046786_circ_g.14 |
ID in PlantcircBase | zma_circ_000476 |
Alias | NA |
Organism | Zea mays |
Position | chr9: 105956460-105956633 JBrowse» |
Reference genome | AGPv4.38 |
Type | e-circRNA |
Identification method | SMALT, Segemehl |
Parent gene | Zm00001d046786 |
Parent gene annotation |
Photosystem I chlorophyll a/b-binding protein 3-1 chloroplastic |
Parent gene strand | - |
Alternative splicing | Zm00001d046786_circ_g.1 Zm00001d046786_circ_g.2 Zm00001d046786_circ_g.3 Zm00001d046786_circ_g.4 Zm00001d046786_circ_g.5 Zm00001d046786_circ_g.6 Zm00001d046786_circ_g.7 Zm00001d046786_circ_g.8 Zm00001d046786_circ_g.9 Zm00001d046786_circ_g.10 Zm00001d046786_circ_g.11 Zm00001d046786_circ_g.12 Zm00001d046786_circ_g.13 Zm00001d046786_circ_g.15 |
Support reads | 9 |
Tissues | shoot |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | Zm00001d046786_T001:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.267412425 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Lu et al., 2015 |