Splice junction sequence |
TTCCTTTGTCCGAGTGTAAGTAGCTTATTCTTCCATAGAATAGATTCTTCATGACTACACCAAA GAGTTCCCGGTCACTGAGCTTCTCTCTAGTATGTTTctgttgcttactggaccatgatccactg ctgtcctcagacaatatatagctcttcccactatgtccgccattgaaattggaccaaatgttcg actatcat
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 464 Transcript exons: 1894787-1894893,1894991-1895174,1895762-1895934 CTGTTGCTTACTGGACCATGATCCACTGCTGTCCTCAGACAATATATAGCTCTTCCCACTATGT CCGCCATTGAAATTGGACCAAATGTTCGACTATCATATGCTTCTTTAGATTTCATCTCTTGATT CTCAGCAACGACCCAGCACTGATCCTTTTCGAGAACAAAAGGCTCATCTTTCTCATCACTTGAT ACCATTTCAGATCCCTCTAAAGCTGCTAGTCTTCTGACTATATACTTATTTGTTTCATTCGGGT CCTTCAAGACAACAGCATCCCCTACGAAAATGTACCTTGTATCAACAACTGGTAGCTTACGGAC AAGTAGCGTGCTTTCATTTGTTCCCATGGTTGGGGCCATCTCTTTTCCTTTGTCCGAGTGTAAG TAGCTTATTCTTCCATAGAATAGATTCTTCATGACTACACCAAAGAGTTCCCGGTCACTGAGCT TCTCTCTAGTATGTTT
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Genomic sequence |
CTGTTGCTTACTGGACCATGATCCACTGCTGTCCTCAGACAATATATAGCTCTTCCCACTATGT CCGCCATTGAAATTGGACCAAATGTTCGACTATCATATGCTTCCTTATTAATACATACCAAAGT ATACATAGATTTAGTTTCTCTTATGTAAGCGCTACATGGATAAGTAATTATGTAAGGGAGAAAG TAAGTGGTGTACTTTAGATTTCATCTCTTGATTCTCAGCAACGACCCAGCACTGATCCTTTTCG AGAACAAAAGGCTCATCTTTCTCATCACTTGATACCATTTCAGATCCCTCTAAAGCTGCTAGTC TTCTGACTATATACTTATTTGTTTCATTCGGGTCCTTCAAGACAACAGCATCCCCTACGAAAAT GTACCTAGATAACAAAGCAAGAAATCCTGATGAGCATCACTAATGATATACACACTGAACCTAG AAAAGGCTGCGAGCTAGGGTTTAGACTGATTATTGGATACATTAAAAAGCTGAAACCAAGAATT TACATTTTCAATGAGCTCATCGGAGTTAAATATACTTGTCTGTTCCAACCAACTCAATTCTGTC CAATTCATTCTGTCAAAGTAAGAAGACATATACATATACACCCACTACACATTTTATCATAAGC AAAACAACAAGCATTGTTATAACTTTTTGCAAACATTTTAATCCTCGATTTCCTCTTTCTCCTA CACTACATACAAGTTACAACTTCCAAATGCAAGATAAGAAATAAAAAATAATGTAAAAGCCCAT GACTTTAGCTAATGGAAATTAAGTACAGCTCCTACACAAGAAAGGAAACACAAATAATCCAACG TTTATGACTTCAGAAAGATAAACATGATCCCATATCCCCACTAGATAACTAGCATACGGAGCAA CATTTCATAGAACACCAAGTGGTAACTTGTTTATGTAAGTGGAACTAAAAGGACTAACCCTTAA TGCCAAGAAACATACCTTGTATCAACAACTGGTAGCTTACGGACAAGTAGCGTGCTTTCATTTG TTCCCATGGTTGGGGCCATCTCTTTTCCTTTGTCCGAGTGTAAGTAGCTTATTCTTCCATAGAA TAGATTCTTCATGACTACACCAAAGAGTTCCCGGTCACTGAGCTTCTCTCTAGTATGTTT |