Detail information of Os02g0173100_circ_g.1


General Information
CircRNA Name Os02g0173100_circ_g.1
ID in PlantcircBase osa_circ_013393
Alias Os02circ05626/Os_ciR8261
Organism Oryza sativa
Position chr2: 3998064-4002336  JBrowse»
Reference genome IRGSP-1.0.38
Type   ue-circRNA
Identification method CIRCexplorer, SMALT, Segemehl, find_circ
Parent gene Os02g0173100
Parent gene annotation Similar to cytochrome P450. (Os02t0173100-01);Similar to cytochr
ome P450. (Os02t0173100-02);Similar to Cytochrome P450 97B3 (EC
1.14.-.-). (Os02t0173100-03);Similar to cDNA clone:J013071M18, f
ull insert sequence. (Os02t0173100-04)
Parent gene strand +
Alternative splicing Os02g0173100_circ_g.2 Os02g0173100_circ_g.3
Support reads 3/2/1
Tissues leaf/root/shoot
Exon boundary   Yes-No
Splicing signals   GT-AG
Number of exons covered Os02t0173100-04:11
Os02t0173100-03:13
Os02t0173100-01:12
Os02t0173100-02:13
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   CAGCTGTGCTTGTGCCGTGCCGCAGCGGGATGCATGCAGTGCAGGAAACAAGAAGCACACAGGA
ATAAATGCATCGATGCAGACAACAACCAATACAAGGcatggctctgtgtacaaactcgcttttg
gacccaaggcatttgttgttgtctccgatccaattgttgctagacatatcctgcgagaaaatgc
tttctgtt
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence CATGGCTCTGTGTACAAACTCGCTTTTGGACCCAAGGCATTTGTTGTTGTCTCCGATCCAATTG
TTGCTAGACATATCCTGCGAGAAAATGCTTTCTGTTATGATAAGGTATTCTTCTAATGCACATT
TTATGAATATCCTTTGTTGGCTCAACTGTAGGTGGTATTGGATCATAATTTTTTTTTTACCATG
ATGGCTGTCAGGTGTCAGCTGATTTATAGCATGTGCTCTGTTGTAGCAACTGAATTTTACCTGT
ATTAATATATATCATGGATAACTAATGTTGCTACTAGACTACTGTTTAGTTTGTTAGGTTTCTT
TCTTACATATTTATGTACTTGAAATCAGGGAGTTCTTGCTGAAATTTTAAAACCAATAATGGGG
AAGGGTCTTATACCTGCTGACCTTGATACCTGGAAGCAAAGGAGAAAAGGTTAGAAAGGTTGGA
TATTGAATCTTAGTTTGTGCACTTTTGGGTTTGTTCTGAGTGAAATGTTGCATGTTTCTGTGTG
CTCATCTAAGGCCATACTGTTTGACTTTTTAAAGGTATAAAAATTGCAGTTGCCAATAGTAATG
GGCCTATTTATCAGACAATTGACTGATATAATTAAACTATTTCCTGCCTTTTTATGAACCAAAC
TGTTTCATAGCCTATTGCGGACTTTATGTTTGTATTTCACTCAATGGCATGCTCATGGTGCACC
TTTTCCAATTTCTTTGTTGTGCAGTTATAACCCCCGGGTTCCATGCCTTATTCATAGATGCTAT
GGTGGGAGTATTTACTAAGTGTTCAGAGAGAACAATATTTAAGCTTGAAGAGCTTATTGAAAGG
GGCGAACATGGGGAAAAGTATACCATAGTGGACCTTGAAGCTGAGTTTTCTAATTTGGCTCTCG
ACATAATTGGCTTGGGCGTGTTCAATTTTGATTTTGATTCGGTTACCAAAGAATCTCCTGTGAT
CAAGGTGAGCATCATATAATACCTATAGTTCTAAACCTCTAATATATGATGGTTATTTCTTCAC
AAGAATTGCATGCGTGGTAATAGTCTGGAACATTTGAGTATGTTATGGAGCAATGTTTATGTCG
GACGTCTATTGTTAGTAGACATGAATACATGATCACATGGCATGCCTTTCTGCTATTTTCTCTT
CCCTTATTTATGGGATTTTAATTTCTTTTTCCTGCAGGCAGTATACGGAACTCTTTTTGAAGCT
GAGCACAGATCCACTTTTTACATTCCCTATTGGAATCTTCCTTTAACTAGATGGATAGTTCCAA
GGCAACGCAAGTTCCACAGTGACCTCAAGGTTATTAATGATTGCCTTGATAGTCTCATAAAAAA
TGCAAAAGAGACAAGACAGGTTTGTTTGAACTGCTGTTCTATTCATACATAGTGCATGTTTTAG
ATCTAGTACTGGTTTTGATGTTTCACAAACATGAAATGTAGGAAGCTGATGTCGAAAAGCTCCA
GCAAAGAGATTACTCATCATTGAAGGTTGGCTGTGGTGATACCTTACTGTGTTTGTTCATTGGC
GAGCACCACATTTCGTTGTTATGACTTATGACCAATAGGTTCGTTTTCCATCATGCTTGTAGGA
TGCCAGCTTGCTGAGGTTCCTTGTTGATATGCGGGGAGCTGATGTTGACGATCGCCAGGTAGTC
ATCAATATTGTTGTGAACTTGGTATACTATGACGCCTATTTCTTCCCACACGTGGCAAATAAGT
TGACAACAATACATGTTTTGTGCTAGCTTCGAGATGACCTTATGACAATGCTTATTGCTGGGCA
TGAAACAACTGCTGCTGTTTTGACATGGTCTGTTTTTCTACTAGCCCAGGTATATAAGTCCTTT
TTGTACCATGCATAGTTCACTAGTTATGGTTTACTAGTTGGGTTGGGTATCACTGTATGTATGT
ACCAATCATATTCTAATATGGTGCAGAATCCCTCCAAGATGAGAAAAGCACAGGCAGAGGTTGA
TTCTGTACTCAGCAATGAGACAATTAATGTGGACCAGCTCAAGAAATTGGAGTATGTTACCTTT
CATAGTGCCATTCCTGTGAATTGAACTGTATTTTAGTTGTTCTATACAAATATTTTTTGAGAAA
TAAATTGGCTTTGCGCTTTCACTTGAATGTGCTTAGGTACATAAGACTGATAATTGTTGAAGCT
CTTCGCTTGTATCCCCAGCCACCATTGTTAATCAGGCGTGCTCTGCGGCCAGATAAATTGCCAG
GTAATCTTGTCCCTGAAGTCTTCAGATTTCTCCTAAATCAAAAGGGTTATGTTAAAGTCACAAG
TTAGTTAGGTAGACACATGCCGGATATTGAAGGGCATGTGGTGTGATGATTAAAGTTCTATTTA
TTGGAAAGGGATACATATTAACATATGCTTCTAATCTTCTTTTTCTCAAAGAAAGTATGAATGG
AAGGATGATATTGCATACTCATAAAACGAACGTATTTGTTAATCTTCATTTTATCGTGATTAGC
GAAATTGTCGCTGATCAACATGTGGTATCTTAATATGGTGGGTTCGTTTTGTTATGGCAAAGCT
GCCATTTGGCAATGTTCTCATACTGAGCCACAATTTGCAGTGTCTTGAGCAAGTCCTAAATGTT
TGTAGTGTGTCGTGTACTCATGTCCCCAGTTTGCCTATGAAAATTTCATGCACATTATTCATAG
GCTGGATGTTTTTCCTATATTTACTTGTGTGGAATTTATAGTTTATTTACAATTAGCATGGTGC
TATTACTACATTGGTTCAGCCACATTGCTTTACAATGCAGGATTTTTCTGTGTTCTTTAGTTCC
TATCATTTGTAGTGATGAATTATGTTTAGTAATCGTTACATTTCGTTAATGAAATGGGAGAGAT
CTCTCTCTGTTTCAAAAAAAAAAAAACGGGAGTAACAGGAAGAGTATCTTGCTTTCCAACTTTG
TTAAATCCATGAACATGCTTCCCTGGATCCTTCAATCCCGTAGTGTCCTAAATAAACTATGAAC
ATTGTAATTTCCTACTGATTATCTCATGCCCCTTTGTCCAGGTGGGTACAATGGTGCAAAAGAA
GGATATGAAATACCAGCTGGAACCGATATATTTCTTTCGGTAAGATGGACAGTTGTTAGATTTA
GGATAGTAATTAAAGCTATACTTGTCTCCTATTTGAGTCTGTTCCACGACTTACGGAAATTGTT
GGTTCTGTAGATATACAACCTCCATAGATCTCCATACTTTTGGGATCGGCCAGATGAGTTTGAA
CCAGAGAGATTTTCAGTACCAAAAAAGGATGAGAGCATAGAAGGGTGGGCTGGTTTTGATCCTG
ACCGGAGTCCTGGTGCTATGTATCCTAACGAGGTTGGCTAGTCTCCTTTTTTTCTCTACTACCT
TTTAGATGTCCTTTTACTAACAAATTGACAACATAACAAACCTGCTGTTACCAGATTTTAGCAG
ACTTTGCTTTCCTTCCTTTTGGCGGAGGACCCCGCAAATGCGTGGGAGACCAGTTTGCACTCCT
CGAGTCGACAGTAGCCCTGGCCCTGCTATTGCAAAAGTTTGATGTGGAGCTGCGAGGATCACCC
GATGAAGTGGAGATGGTGACAGGCGCAACAATTCACACGAAGAGCGGGTTATGGTGCAGAGTGA
GGAGAAGGACCTGATCATCCACCAGTTGGCACCAAAAGGTATCGCTTGACTTCTCATAGCATAT
GCCTTAATCAAGTACTTAAAGCAGTTCTATGAACAGAAACAATACTATGTTCGTGACAACATCT
CCCGTAGCAGTAGGGACAGCATTTCATGCATCAGTGCTATCTCTGTTCGACACATGGGCTCAAA
TTCTGCACCTAAAACAATAGTACACACACTTAATGCCAAACTGACTAGATGATGATGATGTTGG
TAGATCTAATCTAAGCCGATCATTGCACCCAGCAACTCATGCTTCATGTCTCACCTGAGGTGTC
CGGTTTCTTCTAAACTCAGATAACCTGATCTAGGCTGTGGCAGCATGCCATTCGGTAGTAGTAA
GTTCAGAGAATGGAAGCAAGTTAGGTTTCAGTCTCGTGCTTTCTTGTCAGGTAGCCACAGCATT
ATGACGTGGATCAAATTAATGTTAGGCTGTGCAAAACATGGACCTCTGGTTTATCATATTGAGG
TGTTCGTTTTGTGCAGCTGTGCTTGTGCCGTGCCGCAGCGGGATGCATGCAGTGCAGGAAACAA
GAAGCACACAGGAATAAATGCATCGATGCAGACAACAACCAATACAAGG
Conservation Information
Conserved circRNAs osi_circ_012570
PMCS 0.223500622
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA