Plant Circular RNA Database

Detail information of Os04g0666900_circ_g.2

			
						 General Information
					
						CircRNA Name
						Os04g0666900_circ_g.2
					
						ID in PlantcircBase
						osa_circ_025841
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr4: 34041608-34045624  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, KNIFE, PcircRNA_finder
					
						Parent gene
						
							Os04g0666900						
					
						Parent gene annotation
						
							Similar to H1005F08.22 protein. (Os04t0666900-01);Similar to H10
05F08.22 protein. (Os04t0666900-02)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os04g0666900_circ_g.1 Os04g0666900_circ_g.3 Os04g0666900_circ_g.4 Os04g0666900_circ_g.5 						
					
						Support reads
						7
					
						Tissues
						seed
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os04t0666900-01:12
Os04t0666900-02:4

General Information
CircRNA Name	Os04g0666900_circ_g.2
ID in PlantcircBase	osa_circ_025841
Alias	NA
Organism	Oryza sativa
Position	chr4: 34041608-34045624 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer, KNIFE, PcircRNA_finder
Parent gene	Os04g0666900
Parent gene annotation	Similar to H1005F08.22 protein. (Os04t0666900-01);Similar to H10 05F08.22 protein. (Os04t0666900-02)
Parent gene strand	-
Alternative splicing	Os04g0666900_circ_g.1 Os04g0666900_circ_g.3 Os04g0666900_circ_g.4 Os04g0666900_circ_g.5
Support reads	7
Tissues	seed
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os04t0666900-01:12 Os04t0666900-02:4

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CATCAATCTTCCGGACACTGAAGAAAACTGAGTTCCCATATGGAAGAGTCCTTAAGATTCTGAG
AAACTGTTGCCTTGCATCATCTTTTGACAGATGTTCctttcctcttgcataagattgagtctgg
aggttggtactttcaataatgattgaaagaattaaatgagaccttgagctctcaacattcatat
ttgttcca

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTTTCCTCTTGCATAAGATTGAGTCTGGAGGTTGGTACTTTCAATAATGATTGAAAGAATTAAA
TGAGACCTTGAGCTCTCAACATTCATATTTGTTCCAGCGGTGTGTCTTCTCTCGGAACCTCTTA
AAATTATAGCCCTCAGTTCTTCAAAACTTGAAATGTTCACAACTGTCACATTTTCAACAGTAAC
AACCCCCTAAAAGGAAAATTATAAATTAATTAGCTCTATAAAACTGTAAAATAGCAACAATTCA
TGAGCAATTAAAGATATACACATTTTAATAGAGGGAAGTCCTGAAGGAAATTTGCATTGGTCAG
AGGTTTGTCTCTACTCCCTGGCCACTATTACCCTCAAACTGTAGCTATTTGTGTTATGTAGTTC
AATTATGGAGGTACAGGAACACAGATGAATGTTACCGATGCATCGTCTTTTACCTAAAAGGTGC
TAAAATTGATTGCCTAAACTTGCAACAACAAATGTAAACCAAATTAGCGAAAATTATATTATCT
TGCTTGAAATGAGCAAACATTAATTTTATGACAGTACAGGATGTTACTTTTGAGGCACAAAATA
TAGTCAAATGGGAACATAACTTGTTCTTCTAATCAACAGACTTCAACAAAAGCAGACAACGTGT
GAAGCAAGAACAAAGAAGGTTAACATGTCTTGGTCCTATACCTTGGAATCCTTTTTTATTTCCA
ATTTTTGGTGTGTTGCGTTTTTGGCCAACAACAGGTCCACAAGATTATCCTGATAAAGCTCAAC
CATATATGCCTGCGTATCATATGAAAGTCAAAATAAATCACTTTGTTAATAGTACAACTGTTGT
TTACATAGGCCAAATAAATAGGTATCATCCAATGCATATAAATGTATTTAAGGATGCACACGAA
AAAATTGTTACCTTCAAAGAAAATGAATATTTGTGACCATCACGCTTTATCACCCTAAAAAGTT
CAGAGGTAGCCCTTGGGGTAAGACCAGGATTGTTTTCAGATCCATAAATTGTAAAAGTTTTTCC
AGAACCAGTTTGCCCATAAGCAAATATACAAACATTATATCCATCAACGGCCGATTGAACTAGA
TACTGCATCACAAAATTCATGATAAACACATGGAGTCCAATTGCAAATAATCTAATGAGCACAT
GTATGTTAAAAAGAAGTGTTAAAAAAAAGGTCACCTTCGTGTCCTCAAATACTTCTTCTTGGGT
AGTGTTAGCATCAAAAACACGGTCATATATATGTTGTTTTGACTTGTCATCTTTCCATGGATGT
GCAACTGTAAACTCATCAGGGCTGCAAACAATATTCTTGTCCTTTTCAATGAGCTCCTTATCAT
TTAGAGGACGCAGACGACAAAAAACTCTTATTTTTCCCTTCATATCTGTGAGCAATTATGATTC
AATTAGAAACCAAGATATCATAAAATACTATAAGAACTAAAGAAAAGTAACTTCTATTTCTAGC
ATACCTTCAATTGTGTTATAATAACGCTTTCTCAGAACCTGCTCTTGCTTATAAAGATTTTCAA
GCTCAATCAATTGTGCTCCTTGCCTTTTAAGAATCTCAGCAGTCTGTTGGTTTTTTCTGTCCAC
ATCCTGAAATACGAAAAATAGAATTTTACAAATTTCTGAAGGTCCTATAAGAATATTGAATGTA
CTTGTCATATATCTTGTACGTACCGCTTTGAACTCTCGTAACTCGTCAAGTTCTTTGAGACTGT
TTTGCAATGTATCCACCTCAGCATTTCTTAAGGCAAGAGTCGATTCAGTAACATTCAGGGAACG
TGTTCTGCTTTCCAGTTTTTGCTCCAATTCAGCAATACGAGATTTCAGCTTGCAACATTCATCC
TCATAAACTCTTTCCATATTACTTTTCTGTATAGTTGAAGAAACCATATATACTCAAAAATATG
AAACAAAAAAAACTATGCAATGCTCACAGTGAACTATAATTAGGGGATCCAGGATAAGCAAAAG
AAAACCTCTTCACTTTTTGCTCTTTCAAGCCTTTGAACCTTCTGGTCAAGCAGATTATTTTCCA
TTGTTAATTTCTTTGATAATTCCTTGGATGCATCAAGCTCCTTCTTACAGGATTTTAACTCCTC
CTCAAGCTTTGCTAACATCTGTTCAGAACCCCCAAAAGGTCAAATGTATAATAACAATTTGCAA
ACCTAGGGTTGGCTACAAAAGATACGAGCAAATCATTTAAGACAAAACACAGCCTTAGAGATAT
CTAATTGTTCTAAGGTACCTCAATGCTATTATTGACAGTGCCTACAGTTGGGAGAGTATCTCTC
TCAAAATGATTTCCTGATACTCCTGTTCTATTACTGCTTTCTTGGCCCTGACCACTTTTTAATC
TGGTCTCCAGTCTAGTTTTCTCCATCAGTGAAGCCTGATAAAATTGCAAGTTAGATTATACAAA
ATATTTAACCAAGCTGACAGTTTATCGCCATACCTGCAAAGAGGAGTCCTTTTCATCACAAAGG
GATTTTAGTTTATCAAGATCATTTGTTACTTCTTTAATGCTTTGCCGTTCAGATTGCAAGGTAT
CCCTCAGACCTTCTAATTCTTTTTGCATATCTCTTTCTTGTTTTGTCTTCTTCTGTAACTCCTC
ATTCAACTATAAAAAAAAAAAAGACAACCAGTGACAAATGAGCTATGTAAGTAATGGTTTCTTC
CATGCTAAATATACAATGCCATTATCTTCAATATGTTGCAACTTGCAAGACCGAAGTAGGATCT
TAAAGATATACCTTACTGTTACTGAGACTTTTAGTATTTATGAGGCAAGGTATAGAGACCGTTT
TAACTAAAAATGGCAGATGTACTCAAGCACTCCATGAATAGATGCTTAAAAGAAATATGGCGCT
AAAAAAATCATGATTTTAAGCCATATTCTCTGTACAAAAATCCACCAATAACATGAGACAGAAC
TGCCTTTTAGACCTTTCGAGTTTGACCTACTAGTCTAGTTCATTGTCTACCATAAAAATGAGTG
AAATTATAACATCTATTGAAATCCTTTGATATGCATGAATTCAGCTTTTCACCTAATATGTTCT
TTTTATATGTGATGCTGCAAAAAAAAAAAACTAAGTAATATACCATTCACCTTCTTTTTATCTA
TCACAGAGGGTTATAAATTGGCATAGGCCAGGAAGCATTAATCAAATAACCGTTTGCAGACAAT
AATCCAATAACGATCAAATGATCTAGATATTGAATCTAAACTAGCACAGAAAATTACACTAGAT
CATACATTTCAGATAGAGGCAATAACAAGACAGTTCTCCCAAGATTATAAACTATAAGCAGTGT
TCATTATCAATATTATTTTACGGCTAAAACCACTTACCAGATCTGCTTTCCTTTCAGATTCCTC
AACTGCTTTTGACAGTTCTTGGACACGTTTCTCATATATTTCAATATTCGGTGGTTTATATGTT
TGAGAAACATCGTTTTGAGAAACCGCGCTAGTAGCAGAGCGTGCTTTTGAATATCTGCGGAGCA
TCACATCATTGATATGCGTCTGAAGTGCTACACATATTTCCTCGCCCTAAATATCAGATGGTTA
TTTCACAGCCTACACATAGTATGAATTATTTCCTGGTAGAGATTTAAAACTAACCTGCTTAGTT
TCAAACTGAAAGATATGAAGAACACCAGCGACTCTCATTTTAAAGAAAACAGCGGTATTGCTGC
TCCCAAATTGCATGATATCTCTCAGTTCTGCAGAATGAAGATATTCCTTGGGAACCGGACGGAA
AAAATGAACCTGCATTAACGCAGAAAAAGAAATTAGCTAAAACTGGCAGAAAACGTATAGCATT
TCAACATGTGGTTAGGCATCAGACCCCTCGTTTGTTTATTCCCAGAATGATTCTTCCAGGTAAA
AGTCCTATTGGATCATCAATCTTCCGGACACTGAAGAAAACTGAGTTCCCATATGGAAGAGTCC
TTAAGATTCTGAGAAACTGTTGCCTTGCATCATCTTTTGACAGATGTTC
						
					

			
		

Sequences
Splice junction sequence	CATCAATCTTCCGGACACTGAAGAAAACTGAGTTCCCATATGGAAGAGTCCTTAAGATTCTGAG AAACTGTTGCCTTGCATCATCTTTTGACAGATGTTCctttcctcttgcataagattgagtctgg aggttggtactttcaataatgattgaaagaattaaatgagaccttgagctctcaacattcatat ttgttcca
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTTTCCTCTTGCATAAGATTGAGTCTGGAGGTTGGTACTTTCAATAATGATTGAAAGAATTAAA TGAGACCTTGAGCTCTCAACATTCATATTTGTTCCAGCGGTGTGTCTTCTCTCGGAACCTCTTA AAATTATAGCCCTCAGTTCTTCAAAACTTGAAATGTTCACAACTGTCACATTTTCAACAGTAAC AACCCCCTAAAAGGAAAATTATAAATTAATTAGCTCTATAAAACTGTAAAATAGCAACAATTCA TGAGCAATTAAAGATATACACATTTTAATAGAGGGAAGTCCTGAAGGAAATTTGCATTGGTCAG AGGTTTGTCTCTACTCCCTGGCCACTATTACCCTCAAACTGTAGCTATTTGTGTTATGTAGTTC AATTATGGAGGTACAGGAACACAGATGAATGTTACCGATGCATCGTCTTTTACCTAAAAGGTGC TAAAATTGATTGCCTAAACTTGCAACAACAAATGTAAACCAAATTAGCGAAAATTATATTATCT TGCTTGAAATGAGCAAACATTAATTTTATGACAGTACAGGATGTTACTTTTGAGGCACAAAATA TAGTCAAATGGGAACATAACTTGTTCTTCTAATCAACAGACTTCAACAAAAGCAGACAACGTGT GAAGCAAGAACAAAGAAGGTTAACATGTCTTGGTCCTATACCTTGGAATCCTTTTTTATTTCCA ATTTTTGGTGTGTTGCGTTTTTGGCCAACAACAGGTCCACAAGATTATCCTGATAAAGCTCAAC CATATATGCCTGCGTATCATATGAAAGTCAAAATAAATCACTTTGTTAATAGTACAACTGTTGT TTACATAGGCCAAATAAATAGGTATCATCCAATGCATATAAATGTATTTAAGGATGCACACGAA AAAATTGTTACCTTCAAAGAAAATGAATATTTGTGACCATCACGCTTTATCACCCTAAAAAGTT CAGAGGTAGCCCTTGGGGTAAGACCAGGATTGTTTTCAGATCCATAAATTGTAAAAGTTTTTCC AGAACCAGTTTGCCCATAAGCAAATATACAAACATTATATCCATCAACGGCCGATTGAACTAGA TACTGCATCACAAAATTCATGATAAACACATGGAGTCCAATTGCAAATAATCTAATGAGCACAT GTATGTTAAAAAGAAGTGTTAAAAAAAAGGTCACCTTCGTGTCCTCAAATACTTCTTCTTGGGT AGTGTTAGCATCAAAAACACGGTCATATATATGTTGTTTTGACTTGTCATCTTTCCATGGATGT GCAACTGTAAACTCATCAGGGCTGCAAACAATATTCTTGTCCTTTTCAATGAGCTCCTTATCAT TTAGAGGACGCAGACGACAAAAAACTCTTATTTTTCCCTTCATATCTGTGAGCAATTATGATTC AATTAGAAACCAAGATATCATAAAATACTATAAGAACTAAAGAAAAGTAACTTCTATTTCTAGC ATACCTTCAATTGTGTTATAATAACGCTTTCTCAGAACCTGCTCTTGCTTATAAAGATTTTCAA GCTCAATCAATTGTGCTCCTTGCCTTTTAAGAATCTCAGCAGTCTGTTGGTTTTTTCTGTCCAC ATCCTGAAATACGAAAAATAGAATTTTACAAATTTCTGAAGGTCCTATAAGAATATTGAATGTA CTTGTCATATATCTTGTACGTACCGCTTTGAACTCTCGTAACTCGTCAAGTTCTTTGAGACTGT TTTGCAATGTATCCACCTCAGCATTTCTTAAGGCAAGAGTCGATTCAGTAACATTCAGGGAACG TGTTCTGCTTTCCAGTTTTTGCTCCAATTCAGCAATACGAGATTTCAGCTTGCAACATTCATCC TCATAAACTCTTTCCATATTACTTTTCTGTATAGTTGAAGAAACCATATATACTCAAAAATATG AAACAAAAAAAACTATGCAATGCTCACAGTGAACTATAATTAGGGGATCCAGGATAAGCAAAAG AAAACCTCTTCACTTTTTGCTCTTTCAAGCCTTTGAACCTTCTGGTCAAGCAGATTATTTTCCA TTGTTAATTTCTTTGATAATTCCTTGGATGCATCAAGCTCCTTCTTACAGGATTTTAACTCCTC CTCAAGCTTTGCTAACATCTGTTCAGAACCCCCAAAAGGTCAAATGTATAATAACAATTTGCAA ACCTAGGGTTGGCTACAAAAGATACGAGCAAATCATTTAAGACAAAACACAGCCTTAGAGATAT CTAATTGTTCTAAGGTACCTCAATGCTATTATTGACAGTGCCTACAGTTGGGAGAGTATCTCTC TCAAAATGATTTCCTGATACTCCTGTTCTATTACTGCTTTCTTGGCCCTGACCACTTTTTAATC TGGTCTCCAGTCTAGTTTTCTCCATCAGTGAAGCCTGATAAAATTGCAAGTTAGATTATACAAA ATATTTAACCAAGCTGACAGTTTATCGCCATACCTGCAAAGAGGAGTCCTTTTCATCACAAAGG GATTTTAGTTTATCAAGATCATTTGTTACTTCTTTAATGCTTTGCCGTTCAGATTGCAAGGTAT CCCTCAGACCTTCTAATTCTTTTTGCATATCTCTTTCTTGTTTTGTCTTCTTCTGTAACTCCTC ATTCAACTATAAAAAAAAAAAAGACAACCAGTGACAAATGAGCTATGTAAGTAATGGTTTCTTC CATGCTAAATATACAATGCCATTATCTTCAATATGTTGCAACTTGCAAGACCGAAGTAGGATCT TAAAGATATACCTTACTGTTACTGAGACTTTTAGTATTTATGAGGCAAGGTATAGAGACCGTTT TAACTAAAAATGGCAGATGTACTCAAGCACTCCATGAATAGATGCTTAAAAGAAATATGGCGCT AAAAAAATCATGATTTTAAGCCATATTCTCTGTACAAAAATCCACCAATAACATGAGACAGAAC TGCCTTTTAGACCTTTCGAGTTTGACCTACTAGTCTAGTTCATTGTCTACCATAAAAATGAGTG AAATTATAACATCTATTGAAATCCTTTGATATGCATGAATTCAGCTTTTCACCTAATATGTTCT TTTTATATGTGATGCTGCAAAAAAAAAAAACTAAGTAATATACCATTCACCTTCTTTTTATCTA TCACAGAGGGTTATAAATTGGCATAGGCCAGGAAGCATTAATCAAATAACCGTTTGCAGACAAT AATCCAATAACGATCAAATGATCTAGATATTGAATCTAAACTAGCACAGAAAATTACACTAGAT CATACATTTCAGATAGAGGCAATAACAAGACAGTTCTCCCAAGATTATAAACTATAAGCAGTGT TCATTATCAATATTATTTTACGGCTAAAACCACTTACCAGATCTGCTTTCCTTTCAGATTCCTC AACTGCTTTTGACAGTTCTTGGACACGTTTCTCATATATTTCAATATTCGGTGGTTTATATGTT TGAGAAACATCGTTTTGAGAAACCGCGCTAGTAGCAGAGCGTGCTTTTGAATATCTGCGGAGCA TCACATCATTGATATGCGTCTGAAGTGCTACACATATTTCCTCGCCCTAAATATCAGATGGTTA TTTCACAGCCTACACATAGTATGAATTATTTCCTGGTAGAGATTTAAAACTAACCTGCTTAGTT TCAAACTGAAAGATATGAAGAACACCAGCGACTCTCATTTTAAAGAAAACAGCGGTATTGCTGC TCCCAAATTGCATGATATCTCTCAGTTCTGCAGAATGAAGATATTCCTTGGGAACCGGACGGAA AAAATGAACCTGCATTAACGCAGAAAAAGAAATTAGCTAAAACTGGCAGAAAACGTATAGCATT TCAACATGTGGTTAGGCATCAGACCCCTCGTTTGTTTATTCCCAGAATGATTCTTCCAGGTAAA AGTCCTATTGGATCATCAATCTTCCGGACACTGAAGAAAACTGAGTTCCCATATGGAAGAGTCC TTAAGATTCTGAGAAACTGTTGCCTTGCATCATCTTTTGACAGATGTTC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.16073436

Conservation Information
Conserved circRNAs	NA
PMCS	0.16073436

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							34045495-34041620(+)
34045334-34041610(-)
34041623-34045578(-)
						
					

						Potential amino acid sequence
						
							MILPGKSPIGSSIFRTLKKTEFPYGRVLKILRNCCLASSFDRCSFPLA*(+)
MQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSATSAVSQNDV
SQTYKPPNIEIYEKRVQELSKAVEESERKADLLNEELQKKTKQERDMQKELEGLRDTLQSERQS
IKEVTNDLDKLKSLCDEKDSSLQASLMEKTRLETRLKSGQGQESSNRTGVSGNHFERDTLPTVG
TVNNSIEMLAKLEEELKSCKKELDASKELSKKLTMENNLLDQKVQRLERAKSEEKSNMERVYED
ECCKLKSRIAELEQKLESRTRSLNVTESTLALRNAEVDTLQNSLKELDELREFKADVDRKNQQT
AEILKRQGAQLIELENLYKQEQVLRKRYYNTIEDMKGKIRVFCRLRPLNDKELIEKDKNIVCSP
DEFTVAHPWKDDKSKQHIYDRVFDANTTQEEVFEDTKYLVQSAVDGYNVCIFAYGQTGSGKTFT
IYGSENNPGLTPRATSELFRVIKRDGHKYSFSLKAYMVELYQDNLVDLLLAKNATHQKLEIKKD
SKGVVTVENVTVVNISSFEELRAIILRGSERRHTAGTNMNVESSRSHLILSIIIESTNLQTQSY
ARGKEHLSKDDARQQFLRILRTLPYGNSVFFSVRKIDDPIGLLPGRIILGINKRGVHFFRPVPK
EYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKAR
SATSAVSQNDVSQTYKPPNIEIYEKRVQELSKAVEESERKADLLNEELQKKTKQERDMQKELEG
LRDTLQSERQSIKEVTNDLDKLKSLCDEKDSSLQASLMEKTRLETRLKSGQGQESSNRTGVSGN
HFERDTLPTVGTVNNSIEMLAKLEEELKSCKKELDASKELSKKLTMENNLLDQKVQRLERAKSE
EKSNMERVYEDECCKLKSRIAELEQKLESRTRSLNVTESTLALRNAEVDTLQNSLKELDELREF
KADVDRKNQQTAEILKRQGAQLIELENLYKQEQVLRKRYYNTIEDMKGKIRVFCRLRPLNDKEL
IEKDKNIVCSPDEFTVAHPWKDDKSKQHIYDRVFDANTTQEEVFEDTKYLVQSAVDGYNVCIFA
YGQTGSGKTFTIYGSENNPGLTPRATSELFRVIKRDGHKYSFSLKAYMVELYQDNLVDLLLAKN
ATHQKLEIKKDSKGVVTVENVTVVNISSFEELRAIILRGSERRHTAGTNMNVESSRSHLILSII
IESTNLQTQSYARGKEHLSKDDARQQFLRILRTLPYGNSVFFSVRKIDDPIGLLPGRIILGINK
RGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHIN
DVMLRRYSKARSATSAVSQNDVSQTYKPPNIEIYEKRVQELSKAVEESERKADLLNEELQKKTK
QERDMQKELEGLRDTLQSERQSIKEVTNDLDKLKSLCDEKDSSLQASLMEKTRLETRLKSGQGQ
ESSNRTGVSGNHFERDTLPTVGTVNNSIEMLAKLEEELKSCKKELDASKELSKKLTMENNLLDQ
KVQRLERAKSEEKSNMERVYEDECCKLKSRIAELEQKLESRTRSLNVTESTLALRNAEVDTLQN
SLKELDELREFKADVDRKNQQTAEILKRQGAQLIELENLYKQEQVLRKRYYNTIEDMKGKIRVF
CRLRPLNDKELIEKDKNIVCSPDEFTVAHPWKDDKSKQHIYDRVFDANTTQEEVFEDTKYLVQS
AVDGYNVCIFAYGQTGSGKTFTIYGSENNPGLTPRATSELFRVIKRDGHKYSFSLKAYMVELYQ
DNLVDLLLAKNATHQKLEIKKDSKGVVTVENVTVVNISSFEELRAIILRGSERRHTAGTNMNVE
SSRSHLILSIIIESTNLQTQSYARGKEHLSKDDARQQFLRILRTLPYGNSVFFSVRKIDDPIGL
LPGRIILGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGE
EICVALQTHINDVMLRRYSKARSATSAVSQNDVSQTYKPPNIEIYEKRVQELSKAVEESERKAD
LLNEELQKKTKQERDMQKELEGLRDTLQSERQSIKEVTNDLDKLKSLCDEKDSSLQASLMEKTR
LETRLKSGQGQESSNRTGVSGNHFERDTLPTVGTVNNSIEMLAKLEEELKSCKKELDASKELSK
KLTMENNLLDQKVQRLERAKSEEKSNMERVYEDECCKLKSRIAELEQKLESRTRSLNVTESTLA
LRNAEVDTLQNSLKELDELREFKADVDRKNQQTAEILKRQGAQLIELENLYKQEQVLRKRYYNT
IEDMKGKIRVFCRLRPLNDKELIEKDKNIVCSPDEFTVAHPWKDDKSKQHIYDRVFDANTTQEE
VFEDTKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSENNPGLTPRATSELFRVIKRDGHKYSF
SLKAYMVELYQDNLVDLLLAKNATHQKLEIKKDSKGVVTVENVTVVNISSFEELRAIILRGSER
RHTAGTNMNVESSRSHLILSIIIESTNLQTQSYARGK(-)
MQEERNICQKMMQGNSFSES*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	34045495-34041620(+) 34045334-34041610(-) 34041623-34045578(-)
Potential amino acid sequence	MILPGKSPIGSSIFRTLKKTEFPYGRVLKILRNCCLASSFDRCSFPLA(+) MQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSATSAVSQNDV SQTYKPPNIEIYEKRVQELSKAVEESERKADLLNEELQKKTKQERDMQKELEGLRDTLQSERQS IKEVTNDLDKLKSLCDEKDSSLQASLMEKTRLETRLKSGQGQESSNRTGVSGNHFERDTLPTVG TVNNSIEMLAKLEEELKSCKKELDASKELSKKLTMENNLLDQKVQRLERAKSEEKSNMERVYED ECCKLKSRIAELEQKLESRTRSLNVTESTLALRNAEVDTLQNSLKELDELREFKADVDRKNQQT AEILKRQGAQLIELENLYKQEQVLRKRYYNTIEDMKGKIRVFCRLRPLNDKELIEKDKNIVCSP DEFTVAHPWKDDKSKQHIYDRVFDANTTQEEVFEDTKYLVQSAVDGYNVCIFAYGQTGSGKTFT IYGSENNPGLTPRATSELFRVIKRDGHKYSFSLKAYMVELYQDNLVDLLLAKNATHQKLEIKKD SKGVVTVENVTVVNISSFEELRAIILRGSERRHTAGTNMNVESSRSHLILSIIIESTNLQTQSY ARGKEHLSKDDARQQFLRILRTLPYGNSVFFSVRKIDDPIGLLPGRIILGINKRGVHFFRPVPK EYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKAR SATSAVSQNDVSQTYKPPNIEIYEKRVQELSKAVEESERKADLLNEELQKKTKQERDMQKELEG LRDTLQSERQSIKEVTNDLDKLKSLCDEKDSSLQASLMEKTRLETRLKSGQGQESSNRTGVSGN HFERDTLPTVGTVNNSIEMLAKLEEELKSCKKELDASKELSKKLTMENNLLDQKVQRLERAKSE EKSNMERVYEDECCKLKSRIAELEQKLESRTRSLNVTESTLALRNAEVDTLQNSLKELDELREF KADVDRKNQQTAEILKRQGAQLIELENLYKQEQVLRKRYYNTIEDMKGKIRVFCRLRPLNDKEL IEKDKNIVCSPDEFTVAHPWKDDKSKQHIYDRVFDANTTQEEVFEDTKYLVQSAVDGYNVCIFA YGQTGSGKTFTIYGSENNPGLTPRATSELFRVIKRDGHKYSFSLKAYMVELYQDNLVDLLLAKN ATHQKLEIKKDSKGVVTVENVTVVNISSFEELRAIILRGSERRHTAGTNMNVESSRSHLILSII IESTNLQTQSYARGKEHLSKDDARQQFLRILRTLPYGNSVFFSVRKIDDPIGLLPGRIILGINK RGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHIN DVMLRRYSKARSATSAVSQNDVSQTYKPPNIEIYEKRVQELSKAVEESERKADLLNEELQKKTK QERDMQKELEGLRDTLQSERQSIKEVTNDLDKLKSLCDEKDSSLQASLMEKTRLETRLKSGQGQ ESSNRTGVSGNHFERDTLPTVGTVNNSIEMLAKLEEELKSCKKELDASKELSKKLTMENNLLDQ KVQRLERAKSEEKSNMERVYEDECCKLKSRIAELEQKLESRTRSLNVTESTLALRNAEVDTLQN SLKELDELREFKADVDRKNQQTAEILKRQGAQLIELENLYKQEQVLRKRYYNTIEDMKGKIRVF CRLRPLNDKELIEKDKNIVCSPDEFTVAHPWKDDKSKQHIYDRVFDANTTQEEVFEDTKYLVQS AVDGYNVCIFAYGQTGSGKTFTIYGSENNPGLTPRATSELFRVIKRDGHKYSFSLKAYMVELYQ DNLVDLLLAKNATHQKLEIKKDSKGVVTVENVTVVNISSFEELRAIILRGSERRHTAGTNMNVE SSRSHLILSIIIESTNLQTQSYARGKEHLSKDDARQQFLRILRTLPYGNSVFFSVRKIDDPIGL LPGRIILGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGE EICVALQTHINDVMLRRYSKARSATSAVSQNDVSQTYKPPNIEIYEKRVQELSKAVEESERKAD LLNEELQKKTKQERDMQKELEGLRDTLQSERQSIKEVTNDLDKLKSLCDEKDSSLQASLMEKTR LETRLKSGQGQESSNRTGVSGNHFERDTLPTVGTVNNSIEMLAKLEEELKSCKKELDASKELSK KLTMENNLLDQKVQRLERAKSEEKSNMERVYEDECCKLKSRIAELEQKLESRTRSLNVTESTLA LRNAEVDTLQNSLKELDELREFKADVDRKNQQTAEILKRQGAQLIELENLYKQEQVLRKRYYNT IEDMKGKIRVFCRLRPLNDKELIEKDKNIVCSPDEFTVAHPWKDDKSKQHIYDRVFDANTTQEE VFEDTKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSENNPGLTPRATSELFRVIKRDGHKYSF SLKAYMVELYQDNLVDLLLAKNATHQKLEIKKDSKGVVTVENVTVVNISSFEELRAIILRGSER RHTAGTNMNVESSRSHLILSIIIESTNLQTQSYARGK(-) MQEERNICQKMMQGNSFSES(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os04g0666900_circ_g.2

Address

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