Plant Circular RNA Database

Detail information of Csa1G587440_circ_g.2

			
						 General Information
					
						CircRNA Name
						Csa1G587440_circ_g.2
					
						ID in PlantcircBase
						csa_circ_000524
					
						Alias
						Chr1:22088137_22092503
					
						Organism
						
							Cucumis sativus						
					
						Position
						
							chrChr1: 22088137-22092503  JBrowse»						
					
						Reference genome
						
							Cucumis sativus v1.5						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI2
					
						Parent gene
						
							Csa1G587440						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						-
					
						Alternative splicing
						
							Csa1G587440_circ_g.3 Csa1G587440_circ_g.4 						
					
						Support reads
						NA
					
						Tissues
						leaf,root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Csa1G587440.1:3

General Information
CircRNA Name	Csa1G587440_circ_g.2
ID in PlantcircBase	csa_circ_000524
Alias	Chr1:22088137_22092503
Organism	Cucumis sativus
Position	chrChr1: 22088137-22092503 JBrowse»
Reference genome	Cucumis sativus v1.5
Type	e-circRNA
Identification method	CIRI2
Parent gene	Csa1G587440
Parent gene annotation	NA
Parent gene strand	-
Alternative splicing	Csa1G587440_circ_g.3 Csa1G587440_circ_g.4
Support reads	NA
Tissues	leaf,root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Csa1G587440.1:3

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GAGTATCACACTGCTGCATCATTGACCCAATGCTCTTTATATAGCTAACCAGCTCAACAAGGGC
TTTCCTTTCTTCTGCACTATAATTATGTCTCACCACctgtataatcaaatatgtgaagaaagaa
gctgagcttgtagaaaaagttctccaacagcttcaaatcattaatgggaatctcagatgcatta
ttcccaaa

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 523
Transcript exons: 22088137-22088305,22089918-22090059,22092292-22092503
CTGTATAATCAAATATGTGAAGAAAGAAGCTGAGCTTGTAGAAAAAGTTCTCCAACAGCTTCAA
ATCATTAATGGGAATCTCAGATGCATTATTCCCAAAAAGCCCTCCCGGCTTTCTAAGGTTTCCA
CCAGACACCACCTCATAAATCAGAAATTGCAAGCAGTGAACCTGGGTAGCTGTAGGTGCAACTG
GCCGTGGATAAAAGAAGTTCACTTTACTTTCTTCACCTCTTTGCGATTGTGCTTCAGAATCAGA
TTTGCTTCTATTTGCCATCCAATCAGCTGACAAGGTTCGCATATCAGAAAGAATCCTTGAAATT
TCTTTCTTCTTCCGGAAGGTAGTTCGTAACATGGTGGCCAATGTGTTTTGAACAAAATCTTGAA
CCTCAGCATGAACTGCTTCCCACAAAGCATCAGCTACCAGAGTATCACACTGCTGCATCATTGA
CCCAATGCTCTTTATATAGCTAACCAGCTCAACAAGGGCTTTCCTTTCTTCTGCACTATAATTA
TGTCTCACCAC
						
					

						Genomic sequence
						
							CTGTATAATCAAATATGTGAAGAAAGAAGCTGAGCTTGTAGAAAAAGTTCTCCAACAGCTTCAA
ATCATTAATGGGAATCTCAGATGCATTATTCCCAAAAAGCCCTCCCGGCTTTCTAAGGTTTCCA
CCAGACACCACCTCATAAATCAGAAATTGCAAGCAGTGAACCTAAAACAAAATAAAGTAATCTA
ACTTACCCTCAAGCTTGTTAGTTTTTATTTTTTAAAAAATAAAATAAAAGTACATATAAAAACA
AAAGAAAAAAAAATCTTGAACTTAACTAGTTAAGACATCAGAATCTCAACCAAAAAGTGAAAAT
TTTGAATCCTCACATGTTGAACTCAAAGAGGTAAAAAAAGGTCAAATGTAAAGTTGTAGCTATT
AGCTAAGAATAAGTGAATTAAAGTAATGGTCTAGGATGAAAAAGTTCTCTCCCACAAACCCGAT
GCCCCCAACCTTTGTTTGCCTCTGTTCGCCTCTGACCACCCAATTGGGCCATCTCCAGTACCTT
GATCCCGATAAGACAAGAGGTTAAGCTCATGGTAAGCAGAGATGATGTTTTTCGTTAGGATAGG
AAATTTGGTGCTTACACATGGTTTTTTTTTAAAACGGAAACAAGCCTCTTTATTAATGATAATG
AGACTAAAGCTCAAAGTACAAGAGTATTATACTAAGAGCAAAAAGAACTAGTGGAAAATACAAG
CTAAAACTTAAACATAGACTATACTTAGGCAACATAAATATGATGGAAATCTAAAAACGAACCC
GAGCAGAAAATAATGAGCTAATCAAAGCCACTCAAAGACAATACATTAGTAGAAAGTTAAATAC
AAAGAAAAAGTTAAACTCTCTCTCAAAATTAGCAGACTCAAATCTAAAATTTTGCACACCTAAA
TCTTCAAGATGAAAGAGAAAGAGAAAGCTAAGAAGATGCAACCAGTTGCGTCAAGACTGTCTTG
CCAATGCAATCCAATGCCCAGAGGAACTCGATGCAGTATACTGATTCACAAGATCTTGCCAGCA
CTGCCTTCAACGCATTACTCCAGTTGTCAAAGAGAAATCTGCTTTAGCAACGTCAGACCTGAAA
AAACCTTCATCCCACCTTGTAAGAATGTCCCCTGAAACTCTTTAAAACTTCCAGCAAAAGTCCA
GCCAACATCTTTTGAGCTAGATACTTTTTATGAATGCTTTATGGAAGCTGTCTCTTCTAGATTC
TTGAATTAGTACAATGACTATTAATTTCTTTAGTAATCTTTTAATAATCAGCCACATTCATTTT
GTCCAAGTCCTCACGTATTTCAATAGCTAATCTTCTATAAAATAAATGTTCCATTAAACCGAGG
TCTTCTTCCTCATAAGTAACTTCGCCCGAAATAAATTTGGAAATAAGTGGAAATTGGTGGTCGC
GTGTATGACAAATAAGAAATGAGTGGAAAGGTGGGAAAGCATGAATTGGGTCAAAGTGAGTATT
TCCTTTTGGAGCATTATTTGCTTCATCTACCCAACTTAGAAGTAAGTTTCTTGGCATGACAGTA
TCCCAAAAAGAGAGGCCAGGCAGATTACCTCATAGAAAGAGGCCCAGGAAAAAGATTAACCATG
CCACCCCAAATAGAGGTAAAGTCCTAAGCAAGCCAAAGTAAGCTATTTTATGATCTGAGAAGGC
ACACTATCTGAATTTTACTTCTTTCATCATACACCATCGTGTGGGATATTATGCTTAAATCATT
TTTTTATTTTCATTTCAAAAAGTACAACAAGAAAAAAGGTAAGTGAAAGAGACCTGGGTAGCTG
TAGGTGCAACTGGCCGTGGATAAAAGAAGTTCACTTTACTTTCTTCACCTCTTTGCGATTGTGC
TTCAGAATCAGATTTGCTTCTATTTGCCATCCAATCAGCTGACAAGGTTCGCATATCAGAAAGA
ATCCTGAAAGATAATCGCAGAAGTTTGGAAAACTGATAATGTCAAATAAAATTTACCCAAAAGT
TTGTACACCAAGTTAACAAGTTACTCCAATCTAATTATAATTAAAGCATTTGAAATTAACCCAA
ACAAAAAAAAATGATATTAAAAAAGGATTAAAAGAAGACAAGTAATGAAGAAAAAAACACTCAT
CATATTTAGAAAAGAGACAACTGATTCAAATAATTTATTCATTACTAAGGCCATCAAGAAAACA
AAAAGTGTACCTTCCTGATGGCCAGGAACTTTTGGAGCAATAATGCTGAAAAGAGACTCATGCT
TAAAACACCACTGTGTGACTCAGTTTATTTTATATTTTTTTTGAAAAAGATATGGAATTTTTCA
TGAAGAAGATGAAAAGAGACTATCTACTGTAGGTAGCTTCTGTTGTTACTTTGGTCTTTTCATG
ACCGTAGTATTACTCTCGTTCTTTGTATTTTGGATATGATGAGGGTGCTATGGGGTGTCAATAA
GATGTCCGGGTGCACCTACTGATCCTCTCTCTCTCCCATTTCTTGGCTTCCCACTTATTCTCCT
TGTATAGCTCTCTTGTACTTTGAGTTTATTAATAATAAAGAAGTTCGTCTCCTTTTCAAAAAAA
AAGATGAAAAGAGACTCATGCTTAAAATACAACACATTAAAGAACCAAAACTAAGCGGAACAAA
AATAAAATCTTCCTTTATTATATGTTGATTTTCTTATTGCCTCCCAGTCCGTGGGAAAAAGAAT
TTTGCATTCTGGAAAGATTCAAAAGTTGTTAGATGATATAACATTAAATTTTTCTTTACCCATA
AACTTAAACTTTTGGGTCAATCGGTGATTCAAGATAATCTTAGAGCAAGGTGGTCTAGGAGGGG
TCAAACCCCTGTAATGTTATTTTCTCCCCAATTAATATCATTTTCCACTTACTAAGTCTTCATA
CTTCAAGCTCATAAAGTGTGGGATGTGGTAGATGATATAATATTAAATTTTCCTTCACCCATGA
GTTTAAGTTGGTGGGTCAAATGTAATTTAAAAGAAGGGCAGCAAGATTTTTCATTTAGTAGAAT
CAGTTTCTAAAGCTCAGGATGATGGTGGTTTTGGCATTGGTGTCTTAAAATTTAAAAATATGGC
TCTCTTTGGCATAAAGTGATCCAAAATTTTCATGGCATCAGTTTTTTGTTATTTGCCATAGCAC
GCCTCAAAAAGATATAATTTAAGTCTTCGTACCCCATGTATTAGCATCTCCAAAATTTGAAACA
TGTTTAGTCTCTAGCGTCCTTCAAGCTTAGAGATGGCAGAAGTGTTTCTTTTTAGTTAGACTTA
TGGGTTTGTGATTCTTCTTTGAAATTTTGCTTTCATCGGTTGTTCAAATCATCACTTCTTCCTA
ACACTTTGGTTTCTTACTATTGGAATAGTGGTAATCTTTCCTGGAATTTATGTTCCATTACTTT
CTTAAGGATGAAGAATTGCTTGATTTTCAGAATTTGCTAAGTCTTAGTACAAATGAAATAAAAT
GAGGTTACCAGAAGTGGCGCTAGGGCTTTAGCACATGTCATTTGTGAAGGTATATGGATAAAAG
GACTACTAGAAGAATTGAATTCCATCCGGGTTGCCTTTTAAGTGTTTACTGTGACAATTTTCTC
TATAGCTCTGACTACTGTCCTTCATGATAGCAGTGGTTTCAAAGCTCAAAATGTACCTCAAGAT
GAGAGCAGTGTTTTTAAATGCCCAAGGTGCAATGGCCCTATGGAGCCTACCTAGGCACAAGGTG
CACAAAAAGGTGCAGACTTTTATTTTGTGATGTGCACTACATATAAAAATATTGCATTAAAAAA
AGAAAGCACAGTTGAAGCGAAAATATGGGAAAAAAAAAAGACCCCAAACACAAGAAATTTTGCA
TATTTTCCACCTTGACACAAAATCACTCAACTGCTGAAATCACACAAATTTGTGTCTCAACTAT
ACACTTCTATGTCATGATTTATAATTCTGTTCTTATAATTGATGAAAATAATATTTACAACCAA
CTAAAGGAAGATCTTCCTTATTCCTACCTGCAAATATTTTCTCTCATGAAGATTCTGTTTAAAT
TTATATCCTTAGAAAATTTTCACTCACTTTTAATCAACCAAAAATTTAAAAAATTAATTAATTA
ACTAAAAGAAACATTATGGAACAAAATTTTGTTTAAAACCAAGGAAATCAGAGTACCACCTTGA
AATTTCTTTCTTCTTCCGGAAGGTAGTTCGTAACATGGTGGCCAATGTGTTTTGAACAAAATCT
TGAACCTCAGCATGAACTGCTTCCCACAAAGCATCAGCTACCAGAGTATCACACTGCTGCATCA
TTGACCCAATGCTCTTTATATAGCTAACCAGCTCAACAAGGGCTTTCCTTTCTTCTGCACTATA
ATTATGTCTCACCAC
						
					

			
		

Sequences
Splice junction sequence	GAGTATCACACTGCTGCATCATTGACCCAATGCTCTTTATATAGCTAACCAGCTCAACAAGGGC TTTCCTTTCTTCTGCACTATAATTATGTCTCACCACctgtataatcaaatatgtgaagaaagaa gctgagcttgtagaaaaagttctccaacagcttcaaatcattaatgggaatctcagatgcatta ttcccaaa
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 523 Transcript exons: 22088137-22088305,22089918-22090059,22092292-22092503 CTGTATAATCAAATATGTGAAGAAAGAAGCTGAGCTTGTAGAAAAAGTTCTCCAACAGCTTCAA ATCATTAATGGGAATCTCAGATGCATTATTCCCAAAAAGCCCTCCCGGCTTTCTAAGGTTTCCA CCAGACACCACCTCATAAATCAGAAATTGCAAGCAGTGAACCTGGGTAGCTGTAGGTGCAACTG GCCGTGGATAAAAGAAGTTCACTTTACTTTCTTCACCTCTTTGCGATTGTGCTTCAGAATCAGA TTTGCTTCTATTTGCCATCCAATCAGCTGACAAGGTTCGCATATCAGAAAGAATCCTTGAAATT TCTTTCTTCTTCCGGAAGGTAGTTCGTAACATGGTGGCCAATGTGTTTTGAACAAAATCTTGAA CCTCAGCATGAACTGCTTCCCACAAAGCATCAGCTACCAGAGTATCACACTGCTGCATCATTGA CCCAATGCTCTTTATATAGCTAACCAGCTCAACAAGGGCTTTCCTTTCTTCTGCACTATAATTA TGTCTCACCAC
Genomic sequence	CTGTATAATCAAATATGTGAAGAAAGAAGCTGAGCTTGTAGAAAAAGTTCTCCAACAGCTTCAA ATCATTAATGGGAATCTCAGATGCATTATTCCCAAAAAGCCCTCCCGGCTTTCTAAGGTTTCCA CCAGACACCACCTCATAAATCAGAAATTGCAAGCAGTGAACCTAAAACAAAATAAAGTAATCTA ACTTACCCTCAAGCTTGTTAGTTTTTATTTTTTAAAAAATAAAATAAAAGTACATATAAAAACA AAAGAAAAAAAAATCTTGAACTTAACTAGTTAAGACATCAGAATCTCAACCAAAAAGTGAAAAT TTTGAATCCTCACATGTTGAACTCAAAGAGGTAAAAAAAGGTCAAATGTAAAGTTGTAGCTATT AGCTAAGAATAAGTGAATTAAAGTAATGGTCTAGGATGAAAAAGTTCTCTCCCACAAACCCGAT GCCCCCAACCTTTGTTTGCCTCTGTTCGCCTCTGACCACCCAATTGGGCCATCTCCAGTACCTT GATCCCGATAAGACAAGAGGTTAAGCTCATGGTAAGCAGAGATGATGTTTTTCGTTAGGATAGG AAATTTGGTGCTTACACATGGTTTTTTTTTAAAACGGAAACAAGCCTCTTTATTAATGATAATG AGACTAAAGCTCAAAGTACAAGAGTATTATACTAAGAGCAAAAAGAACTAGTGGAAAATACAAG CTAAAACTTAAACATAGACTATACTTAGGCAACATAAATATGATGGAAATCTAAAAACGAACCC GAGCAGAAAATAATGAGCTAATCAAAGCCACTCAAAGACAATACATTAGTAGAAAGTTAAATAC AAAGAAAAAGTTAAACTCTCTCTCAAAATTAGCAGACTCAAATCTAAAATTTTGCACACCTAAA TCTTCAAGATGAAAGAGAAAGAGAAAGCTAAGAAGATGCAACCAGTTGCGTCAAGACTGTCTTG CCAATGCAATCCAATGCCCAGAGGAACTCGATGCAGTATACTGATTCACAAGATCTTGCCAGCA CTGCCTTCAACGCATTACTCCAGTTGTCAAAGAGAAATCTGCTTTAGCAACGTCAGACCTGAAA AAACCTTCATCCCACCTTGTAAGAATGTCCCCTGAAACTCTTTAAAACTTCCAGCAAAAGTCCA GCCAACATCTTTTGAGCTAGATACTTTTTATGAATGCTTTATGGAAGCTGTCTCTTCTAGATTC TTGAATTAGTACAATGACTATTAATTTCTTTAGTAATCTTTTAATAATCAGCCACATTCATTTT GTCCAAGTCCTCACGTATTTCAATAGCTAATCTTCTATAAAATAAATGTTCCATTAAACCGAGG TCTTCTTCCTCATAAGTAACTTCGCCCGAAATAAATTTGGAAATAAGTGGAAATTGGTGGTCGC GTGTATGACAAATAAGAAATGAGTGGAAAGGTGGGAAAGCATGAATTGGGTCAAAGTGAGTATT TCCTTTTGGAGCATTATTTGCTTCATCTACCCAACTTAGAAGTAAGTTTCTTGGCATGACAGTA TCCCAAAAAGAGAGGCCAGGCAGATTACCTCATAGAAAGAGGCCCAGGAAAAAGATTAACCATG CCACCCCAAATAGAGGTAAAGTCCTAAGCAAGCCAAAGTAAGCTATTTTATGATCTGAGAAGGC ACACTATCTGAATTTTACTTCTTTCATCATACACCATCGTGTGGGATATTATGCTTAAATCATT TTTTTATTTTCATTTCAAAAAGTACAACAAGAAAAAAGGTAAGTGAAAGAGACCTGGGTAGCTG TAGGTGCAACTGGCCGTGGATAAAAGAAGTTCACTTTACTTTCTTCACCTCTTTGCGATTGTGC TTCAGAATCAGATTTGCTTCTATTTGCCATCCAATCAGCTGACAAGGTTCGCATATCAGAAAGA ATCCTGAAAGATAATCGCAGAAGTTTGGAAAACTGATAATGTCAAATAAAATTTACCCAAAAGT TTGTACACCAAGTTAACAAGTTACTCCAATCTAATTATAATTAAAGCATTTGAAATTAACCCAA ACAAAAAAAAATGATATTAAAAAAGGATTAAAAGAAGACAAGTAATGAAGAAAAAAACACTCAT CATATTTAGAAAAGAGACAACTGATTCAAATAATTTATTCATTACTAAGGCCATCAAGAAAACA AAAAGTGTACCTTCCTGATGGCCAGGAACTTTTGGAGCAATAATGCTGAAAAGAGACTCATGCT TAAAACACCACTGTGTGACTCAGTTTATTTTATATTTTTTTTGAAAAAGATATGGAATTTTTCA TGAAGAAGATGAAAAGAGACTATCTACTGTAGGTAGCTTCTGTTGTTACTTTGGTCTTTTCATG ACCGTAGTATTACTCTCGTTCTTTGTATTTTGGATATGATGAGGGTGCTATGGGGTGTCAATAA GATGTCCGGGTGCACCTACTGATCCTCTCTCTCTCCCATTTCTTGGCTTCCCACTTATTCTCCT TGTATAGCTCTCTTGTACTTTGAGTTTATTAATAATAAAGAAGTTCGTCTCCTTTTCAAAAAAA AAGATGAAAAGAGACTCATGCTTAAAATACAACACATTAAAGAACCAAAACTAAGCGGAACAAA AATAAAATCTTCCTTTATTATATGTTGATTTTCTTATTGCCTCCCAGTCCGTGGGAAAAAGAAT TTTGCATTCTGGAAAGATTCAAAAGTTGTTAGATGATATAACATTAAATTTTTCTTTACCCATA AACTTAAACTTTTGGGTCAATCGGTGATTCAAGATAATCTTAGAGCAAGGTGGTCTAGGAGGGG TCAAACCCCTGTAATGTTATTTTCTCCCCAATTAATATCATTTTCCACTTACTAAGTCTTCATA CTTCAAGCTCATAAAGTGTGGGATGTGGTAGATGATATAATATTAAATTTTCCTTCACCCATGA GTTTAAGTTGGTGGGTCAAATGTAATTTAAAAGAAGGGCAGCAAGATTTTTCATTTAGTAGAAT CAGTTTCTAAAGCTCAGGATGATGGTGGTTTTGGCATTGGTGTCTTAAAATTTAAAAATATGGC TCTCTTTGGCATAAAGTGATCCAAAATTTTCATGGCATCAGTTTTTTGTTATTTGCCATAGCAC GCCTCAAAAAGATATAATTTAAGTCTTCGTACCCCATGTATTAGCATCTCCAAAATTTGAAACA TGTTTAGTCTCTAGCGTCCTTCAAGCTTAGAGATGGCAGAAGTGTTTCTTTTTAGTTAGACTTA TGGGTTTGTGATTCTTCTTTGAAATTTTGCTTTCATCGGTTGTTCAAATCATCACTTCTTCCTA ACACTTTGGTTTCTTACTATTGGAATAGTGGTAATCTTTCCTGGAATTTATGTTCCATTACTTT CTTAAGGATGAAGAATTGCTTGATTTTCAGAATTTGCTAAGTCTTAGTACAAATGAAATAAAAT GAGGTTACCAGAAGTGGCGCTAGGGCTTTAGCACATGTCATTTGTGAAGGTATATGGATAAAAG GACTACTAGAAGAATTGAATTCCATCCGGGTTGCCTTTTAAGTGTTTACTGTGACAATTTTCTC TATAGCTCTGACTACTGTCCTTCATGATAGCAGTGGTTTCAAAGCTCAAAATGTACCTCAAGAT GAGAGCAGTGTTTTTAAATGCCCAAGGTGCAATGGCCCTATGGAGCCTACCTAGGCACAAGGTG CACAAAAAGGTGCAGACTTTTATTTTGTGATGTGCACTACATATAAAAATATTGCATTAAAAAA AGAAAGCACAGTTGAAGCGAAAATATGGGAAAAAAAAAAGACCCCAAACACAAGAAATTTTGCA TATTTTCCACCTTGACACAAAATCACTCAACTGCTGAAATCACACAAATTTGTGTCTCAACTAT ACACTTCTATGTCATGATTTATAATTCTGTTCTTATAATTGATGAAAATAATATTTACAACCAA CTAAAGGAAGATCTTCCTTATTCCTACCTGCAAATATTTTCTCTCATGAAGATTCTGTTTAAAT TTATATCCTTAGAAAATTTTCACTCACTTTTAATCAACCAAAAATTTAAAAAATTAATTAATTA ACTAAAAGAAACATTATGGAACAAAATTTTGTTTAAAACCAAGGAAATCAGAGTACCACCTTGA AATTTCTTTCTTCTTCCGGAAGGTAGTTCGTAACATGGTGGCCAATGTGTTTTGAACAAAATCT TGAACCTCAGCATGAACTGCTTCCCACAAAGCATCAGCTACCAGAGTATCACACTGCTGCATCA TTGACCCAATGCTCTTTATATAGCTAACCAGCTCAACAAGGGCTTTCCTTTCTTCTGCACTATA ATTATGTCTCACCAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.46886207

Conservation Information
Conserved circRNAs	NA
PMCS	0.46886207

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							22092427-22092492(-)
						
						Potential amino acid sequence
						
							MMQQCDTLVADALWEAVHAEVQDFVQNTLATMLRTTFRKKKEISRILSDMRTLSADWMANRSKS
DSEAQSQRGEESKVNFFYPRPVAPTATQVHCLQFLIYEVVSGGNLRKPGGLFGNNASEIPINDL
KLLENFFYKLSFFLHIFDYTGGET*
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	22092427-22092492(-)
Potential amino acid sequence	MMQQCDTLVADALWEAVHAEVQDFVQNTLATMLRTTFRKKKEISRILSDMRTLSADWMANRSKS DSEAQSQRGEESKVNFFYPRPVAPTATQVHCLQFLIYEVVSGGNLRKPGGLFGNNASEIPINDL KLLENFFYKLSFFLHIFDYTGGET*
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zhu et al., 2019

circRNA

Detail information of Csa1G587440_circ_g.2

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