Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os08g0126300_circ_g.7 |
ID in PlantcircBase | osa_circ_035694 |
Alias | Os08circ01157 |
Organism | Oryza sativa |
Position | chr8: 1526152-1528923 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | ue-circRNA |
Identification method | SMALT, Segemehl |
Parent gene | Os08g0126300 |
Parent gene annotation |
Similar to Glyceraldehyde-3-phosphate dehydrogenase (Fragment). (Os08t0126300-01);Similar to Glyceraldehyde-3-phosphate dehydrog enase (Fragment). (Os08t0126300-02);Similar to cDNA clone:J02308 0G06, full insert sequence. (Os08t0126300-03) |
Parent gene strand | + |
Alternative splicing | Os08g0126300_circ_g.1 Os08g0126300_circ_g.2 Os08g0126300_circ_g.3 Os08g0126300_circ_g.4 Os08g0126300_circ_g.5 Os08g0126300_circ_g.6 Os08g0126350_circ_g.1 Os08g0126350_circ_g.2 Os08g0126350_circ_g.3 Os08g0126350_circ_g.4 Os08g0126350_circ_g.5 Os08g0126350_circ_g.6 Os08g0126350_circ_g.7 Os08g0126350_circ_g.8 Os08g0126350_circ_g.9 Os08g0126350_circ_g.10 Os08g0126350_circ_g.11 Os08g0126300_circ_g.12 |
Support reads | 2 |
Tissues | panicle |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | Os08t0126300-01:9 Os08t0126300-03:3 Os08t0126300-02:9 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.148349889 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Lu et al., 2015 |