Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G05230_circ_g.2 |
ID in PlantcircBase | ath_circ_000785 |
Alias | Ath_circ_FC0186 |
Organism | Arabidpsis thaliana |
Position | chr1: 1513994-1514265 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | CIRCexplorer, KNIFE, PcircRNA_finder |
Parent gene | AT1G05230 |
Parent gene annotation |
AT1G05230 protein |
Parent gene strand | - |
Alternative splicing | AT1G05230_circ_g.1 |
Support reads | 1 |
Tissues | aerial |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G05230.11:1 AT1G05230.10:1 AT1G05230.5:1 AT1G05230.9:1 AT1G05230.2:1 AT1G05230.6:1 AT1G05230.8:1 AT1G05230.3:1 AT1G05230.12:1 AT1G05230.1:1 AT1G05230.4:1 AT1G05230.7:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.62968583 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017;Chen et al., 2017a |