Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | AT1G12750_circ_g.1 |
ID in PlantcircBase | ath_circ_002285 |
Alias | 1:4345550-4345713 |
Organism | Arabidpsis thaliana |
Position | chr1: 4345550-4345713 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | find_circ; CIRI2 |
Parent gene | AT1G12750 |
Parent gene annotation |
RHOMBOID-like protein 6, mitochondrial |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | 2/1 |
Tissues | root;leaf |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G12750.7:1 AT1G12750.5:1 AT1G12750.2:1 AT1G12750.4:1 AT1G12750.1:1 AT1G12750.6:1 AT1G12750.3:1 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.221033533 |
Functional Information | |
---|---|
Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Philips et al., 2020 |