Plant Circular RNA Database

Detail information of Csa3G038750_circ_g.1

			
						 General Information
					
						CircRNA Name
						Csa3G038750_circ_g.1
					
						ID in PlantcircBase
						csa_circ_001378
					
						Alias
						Chr3:2798515_2803498
					
						Organism
						
							Cucumis sativus						
					
						Position
						
							chrChr3: 2798515-2803498  JBrowse»						
					
						Reference genome
						
							Cucumis sativus v1.5						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI2
					
						Parent gene
						
							Csa3G038750						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						+
					
						Alternative splicing
						
							Csa3G038750_circ_g.2 						
					
						Support reads
						NA
					
						Tissues
						leaf,root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Csa3G038750.1:11

General Information
CircRNA Name	Csa3G038750_circ_g.1
ID in PlantcircBase	csa_circ_001378
Alias	Chr3:2798515_2803498
Organism	Cucumis sativus
Position	chrChr3: 2798515-2803498 JBrowse»
Reference genome	Cucumis sativus v1.5
Type	e-circRNA
Identification method	CIRI2
Parent gene	Csa3G038750
Parent gene annotation	NA
Parent gene strand	+
Alternative splicing	Csa3G038750_circ_g.2
Support reads	NA
Tissues	leaf,root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Csa3G038750.1:11

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TTTAACGATTCCCAGGCATTGGTACGAATCTTGTGCCATAAAAAAGATACGGAAGCTTCTATGT
TTCTAAAGCGAAAATATAATCTCCCTGCTTCTTCAGattgtacaaattgccaagcctataattc
ttgactggatgatcgatcagctggaacaaacctctgaatggactggacgtgctttcaagttaga
ggttggtt

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1237
Transcript exons: 2798515-2798607,2799297-2799368,2799761-2799878,2800420-
2800586,2800856-2800940,2801811-2801948,2802346-2802452,
2802582-2802659,2802882-2802977,2803118-2803213,2803312-
2803498
ATTGTACAAATTGCCAAGCCTATAATTCTTGACTGGATGATCGATCAGCTGGAACAAACCTCTG
AATGGACTGGACGTGCTTTCAAGTTAGAGAACTGGGAGCCGATATCATTTCAGCAAAATTTGGC
AGCATCAGTTATTGAAGTTTTTAGAATAATTGAGGAGACTGTTGATCAGTTTTTTGACCTGAAC
CTTCCGATGGACATCACACATTTGCAAGCTCTCCTGTCCATTGTCTACCACAGTTTGGATGGCT
ATTTATCTGGTCTGCTCAACCAGTTAGTCGAGAAGAATTGTTTGTATCCACCTGTTCCTCCACT
GACTCGTTTTGTGGAGACAGCCACAACAGGAAAGAAAAAGTTGCCTGAATCTCACTTAGATGAG
CATGTGAACAGAAAATTGAATGGCCTGACAATATCTAAGCTTTGTATTAAATTGAATACTCTTG
GTTATATTCAAAAACAAATTGTAACACTGGAGGACAGAGTTGGAAAATCTTGGGCACTTCTTGG
ACGATCTGCCAAGCATAAACAGGCCCAGGTAGAGGTTTCCACGACTTCAAATGGTGGTATTGGT
ACCTTCAGTGACGAAGCTAATGAGTTGTTTGCCAACACTTTCAATAACATTAAGAGTTTCATCG
CAAAATCTATCAGCAAGTTCTGTGACTTTACTGGCACAAAAATTATTTTCTCAGATCTCAGAGA
CGAATTCCTCTCATATTTGTATCGTGGCAATGTTGAAGCTGCTCGATTAGAAGGCTTCCTCGTG
CATCTTGATGTTGTCCTGAACAATGTATGTGGCATGATCGATGGTACTCTTAGGGATCTTGTGG
TATTAAGCATTTGTCGAGCATCAATGGAAGCCTTCACATGGGTGATGCTTAGTGGAGGTCCTTC
ACGTGGATTTTCTGATTCAGATATTGTTCTCATTAGGGAAGATCTAGGCATATTGAAGGACTTT
TTTATAGCTGATAAAGAAGGCCTTTCCCGTATTTTTGTTGAGAAGGAAGCCGAATTTGCTGAAG
AAATATTGGGATTATATTCACTTCCGACTGAAACTATTATCCAATTACTGATGAGTTCAAGTGG
GAAAAATTCTACTGAGTTGGATCCATGTGGTAATAATGGCAGTCTTCAATTTAACGATTCCCAG
GCATTGGTACGAATCTTGTGCCATAAAAAAGATACGGAAGCTTCTATGTTTCTAAAGCGAAAAT
ATAATCTCCCTGCTTCTTCAG
						
					

						Genomic sequence
						
							ATTGTACAAATTGCCAAGCCTATAATTCTTGACTGGATGATCGATCAGCTGGAACAAACCTCTG
AATGGACTGGACGTGCTTTCAAGTTAGAGGTTGGTTATTTGCAGAGTGATTTTTTGGGTTAATA
ATTGAGCAGTAAGTAATGTATTATGATACTTGTGTGAGTGAAAGCAGTAGCTTGGCATTTTCTT
AATTATGTAAAAAATAGTGAAATTTTCAATATTTCTCCTTCTTATTTACCACCAACAATACTTC
ATGTGTAGGATGGCCTCCAAGAAAGGCGAATATAGTTTTTATTCTAATCAAAATCATAAATTTT
AGGTCTAAAAGGTTAAAGATACAAGAGAGAGTTTTTTCTAATTAGTTATTTATAAGAATATCCT
AACCTTGACATTCATTTACAACACTCCCCTTCAAGATGAGTTGTAATATCATACAATCCAAACT
TGTCATTCAAATTTGTAAGTTAGGAATAAAAATAAAAAAAACAAATGCTAAAACAAAAAACTAT
ATTTAACCTATAATCTGAAAAGTTCAAACCAAACGGAGAAAGAAAAAAGAAAGACAAAAAAAGA
AAAATCAAACGATTAGGTTGGCTTGAAATTGGCTTTTGAGTTTTAGTTGTTGAATTCAATTATG
ATTTATAAAATATCTACATATGATCTCTTCTTATATGGATTCAAACAACTGCACAAAGTACAGA
ATAATTATTTCAGATTTATATCCTTTTAACACTGCATTCACACCTTTTTAACTAACTTCCATTT
TGTGGCAAGTGAAGAACTGGGAGCCGATATCATTTCAGCAAAATTTGGCAGCATCAGTTATTGA
AGTTTTTAGAATAATTGAGGAGGTATTATTCCTGTAAAGACATTTACTTTAGTTAGGTTTTAAT
GAGAAGAATTTTGGTTTTGTTCCTATGAATTGAAATGATACTTTGGTACTTAAATATTTGAAGT
TTGGGAGTGAATAAACTATTTATAGAGATACTGTTACATAGTATGATCAATAAATTTTTACCAC
TAAAGTTTATATTCTACCTGGAAATTTGTCTAAGTTGTTAGTGGTGATTCTTATTGGTTTGTCC
TGCCTTCTTTTCAAATAATCGATACCATATGCAACTGGTGGAAATAGTAGTAGTTTGCTTGCTG
CTACCTTTTTTTTATTTGCCTTTTGAATTTACTATTGAGGTTTAGTGTTATGAAGTTTGTTTAA
TATTATGGAATTATAATGAAAAACTTGCAGACTGTTGATCAGTTTTTTGACCTGAACCTTCCGA
TGGACATCACACATTTGCAAGCTCTCCTGTCCATTGTCTACCACAGTTTGGATGGCTATTTATC
TGGTCTGCTCAACCAGTTAGGTAATTTATGAATTTCTGATTTAGGAAGAATGTGCGTTGATGGA
AAACTGAACACACTCAACACACATGAATATATATGATAGGAATCAAGAACTTGTTATTGAATTC
AAAAGATACCCTAAGTAAGGTATTATGACCTAATTTTCCTTGCACTGTCAAGACAAGACTCTAT
ACTAATGTCAAAAGCAAGATAACTTCCTACCCGATGTCCAACTACATAGTAGTCCCTATTCTAA
CCATCTCATCTGTGGTCCCACTAGATGATGGCTCCCCTCCCTAACAAACTCTTTTCCTTTTCGA
CCCCTCCACTCATTTATGTATACAACTGGTAGTCTAAAAATACATTTATTAAATATTATCATAA
ACCAGCATATGCATGACTAGTGCTTTAATGTACTCCTTTCATTTCTGGAGTTGGAAGACCAAGA
TCATGTACGTTTAGCTTATTGGTGATTTGGTTATATTATCTTTCCTTTATTAATCTCTACTCTT
TAAATGGTCATTTTATTGGTGATTTGATCATATTATCTTTCATTTGCAGTCGAGAAGAATTGTT
TGTATCCACCTGTTCCTCCACTGACTCGTTTTGTGGAGACAGCCACAACAGGAAAGAAAAAGTT
GCCTGAATCTCACTTAGATGAGCATGTGAACAGAAAATTGAATGGCCTGACAATATCTAAGCTT
TGTATTAAATTGAATACTCTTGGTGTAAGTGATGCTATAATTTACAAGCTTCTTTTCCTCGCTA
AATGTGCAGCATGTTTAAAGTTACGTGAGATAATTATCATATTGTAAATACCATACTTTTAATA
TCTTGGGCATGGTCTTTGAGATGTGAGGTCTGTTAATGACATTACAATATTGGGGGATGGAAGC
TCCCCCTCAAGTCTCTTGTGCAACCATAGTAAACAGCATTCTTAATGGCATTGCCGATTGTTAG
TTTTATTTCGTGATATGTCTATTTTCTCTTTATGCAGTATATTCAAAAACAAATTGTAACACTG
GAGGACAGAGTTGGAAAATCTTGGGCACTTCTTGGACGATCTGCCAAGCATAAACAGGGTACTT
TCATTTAATATTTGTGTTCAATATGCATAGCATTATTGATTGATAAAAGACAGAAACTAGTGAT
CTGACTTCATTTTGCTTGGACTAAAGTGCCTATTTTGAAAATTTTAGAGACCAAATATACACCA
ACGCCAAACATTTGGGACCAGAAAGTATATTTTGTTAAAAAGGAAAAAAGTTTTTTAGAACCAT
TTTTTTCATGTTAAGGACTAAATAGAGACCAATCTCAAGCCTTAGGGACCACGTTTGTTTTCTT
TGTCCTAAATGTTTAATCATTTTGAGTACTTTAACAATTTTGCTTGTATACTAAGTTAAAATGA
TAAATTGAGTAAGAGTAGTTAAGGAGATAAAGATCACATCAAAGTTTTCTTACATAAAAATCCT
GCACAAGGGAAAACATATGGGCACCCGTGCCATGAACAAGTCTACTATGAAAGAATTACAAACT
TAGAATTTATGACCCAGATTTACGAGCAACACTTAATTGATGTTCTTTACAGCCCCACTTAAAA
TCATGGACCAAGGTGCTTCTAGATTAAAAAATATATATATATAATACATCATTAATCCACAAAG
TTTAGATACCCTGTAGCTATTTAAGTTTGAAGGGCACAAACATAATACTAGAGACCAAACGAAG
TCTTACTCTTCAAGTTTGTTGATCTCTAAATCCATTGCAAATTAGATAGATGACCTGGACTTGA
CGGAAAATTGAGTACTTCTACAACATCTGGACACCTTAAATTGAAGCAATTTTATTTGTTTGTG
TATAATAAATTTAGAATGGTTATTCCAACATATTGCCTCTGCTTCATTTAATTTAAAAATGATT
TTTTGAAAATATCTGTATCATCATCCAATCAGCCCAGGTAGAGGTTTCCACGACTTCAAATGGT
GGTATTGGTACCTTCAGTGACGAAGCTAATGAGTTGTTTGCCAACACTTTCAATAACATTAAGA
GTTTCATCGCAAAATCTATCAGCAAGTTCTGTGACTTTACTGGTGAGTTGCAAAAACTGATTTA
CATCGGTCAAGATTAGCAACCAATTTTATTTTGTCTTGAAATTTTTTGCAGTTAGTGAGCTTAA
GGTATATTAAACATATAATTCGTTGACCCTAACAGTAAAATGCATTGTCTGATTTCCGTAATTT
CTATCCAAGTATATCCATAATAGGGGGAACTGGGAAGGACATAGCCTATTTAATTCACACATGG
TTTGGTTTTTCCCCGTAAATTTTCCATTCTGTTTGGATCAGGTTGAAGTTATTTTTACACTTCT
ATTTTTGGTTTATTTTTAAACTGTAGGAAGATGATTGTAGAATGTAACTGTCAAAATTCTTATT
TTTACAATCTTTTTATCTCTGCTTGATAGTCTTTTGATCAAATTCTACTCTCCAGGCACAAAAA
TTATTTTCTCAGATCTCAGAGACGAATTCCTCTCATATTTGTATCGTGGCAATGTTGAAGCTGC
TCGATTAGAAGGCTTCCTCGTGCATCTTGATGTTGTAAGATCTTTGATTCCCGAAATGTGATAT
TTTAGACAATTTTGTCTGGCACACCTTGCATATCTGAACTATAATATTTCTTTATAATTTTCAT
TTCTGGGTTGTATTAATCTAATCTGTCTCTTATAGGTCCTGAACAATGTATGTGGCATGATCGA
TGGTACTCTTAGGGATCTTGTGGTATTAAGCATTTGTCGAGCATCAATGGTACGCTAATGCTAG
TTTTATCTGTTACCTTTTTGAATTTCATCCAATCAATGAAATTATAGATGAAACAATTCTTTTA
ACTCTGAGATAGTGGTAAATCTTCCCTTTATAACTTGATCAAACCATTGAAATTATTGTTATTT
CTCTTTCCACAAGAAAAAGAAAAAGAAAAAGGAACCCTATTACATTTCACTTTTTCCTCGGAAA
TGTATTGTTTTCCAGGAAGCCTTCACATGGGTGATGCTTAGTGGAGGTCCTTCACGTGGATTTT
CTGATTCAGATATTGTTCTCATTAGGGAAGATCTAGGCATATTGAAGGTATGTGCGCTAAGTTA
TGGAATTCTTGTAACATATAAGGTCATAGCTTCCGTGTAAGTTGAAAAAAAAATGGCTGTATGA
TCTTTTGGTTTGCGATAAAAGATTCAGACAATATTGCTTCTTGCATCCGTCAATTTCAGGACTT
TTTTATAGCTGATAAAGAAGGCCTTTCCCGTATTTTTGTTGAGAAGGAAGCCGAATTTGCTGAA
GAAATATTGGGATTATATTCACTTCCGGTTAGTTTATCTTATTAGTCAAGTTTATATGATAATT
AAGTTCCATAGTAGAGGAATTCAGGTGGGCTGCGTTTTCAAATTGTTGCATTTTCCTGCAGACT
GAAACTATTATCCAATTACTGATGAGTTCAAGTGGGAAAAATTCTACTGAGTTGGATCCATGTG
GTAATAATGGCAGTCTTCAATTTAACGATTCCCAGGCATTGGTACGAATCTTGTGCCATAAAAA
AGATACGGAAGCTTCTATGTTTCTAAAGCGAAAATATAATCTCCCTGCTTCTTCAG
						
					

			
		

Sequences
Splice junction sequence	TTTAACGATTCCCAGGCATTGGTACGAATCTTGTGCCATAAAAAAGATACGGAAGCTTCTATGT TTCTAAAGCGAAAATATAATCTCCCTGCTTCTTCAGattgtacaaattgccaagcctataattc ttgactggatgatcgatcagctggaacaaacctctgaatggactggacgtgctttcaagttaga ggttggtt
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1237 Transcript exons: 2798515-2798607,2799297-2799368,2799761-2799878,2800420- 2800586,2800856-2800940,2801811-2801948,2802346-2802452, 2802582-2802659,2802882-2802977,2803118-2803213,2803312- 2803498 ATTGTACAAATTGCCAAGCCTATAATTCTTGACTGGATGATCGATCAGCTGGAACAAACCTCTG AATGGACTGGACGTGCTTTCAAGTTAGAGAACTGGGAGCCGATATCATTTCAGCAAAATTTGGC AGCATCAGTTATTGAAGTTTTTAGAATAATTGAGGAGACTGTTGATCAGTTTTTTGACCTGAAC CTTCCGATGGACATCACACATTTGCAAGCTCTCCTGTCCATTGTCTACCACAGTTTGGATGGCT ATTTATCTGGTCTGCTCAACCAGTTAGTCGAGAAGAATTGTTTGTATCCACCTGTTCCTCCACT GACTCGTTTTGTGGAGACAGCCACAACAGGAAAGAAAAAGTTGCCTGAATCTCACTTAGATGAG CATGTGAACAGAAAATTGAATGGCCTGACAATATCTAAGCTTTGTATTAAATTGAATACTCTTG GTTATATTCAAAAACAAATTGTAACACTGGAGGACAGAGTTGGAAAATCTTGGGCACTTCTTGG ACGATCTGCCAAGCATAAACAGGCCCAGGTAGAGGTTTCCACGACTTCAAATGGTGGTATTGGT ACCTTCAGTGACGAAGCTAATGAGTTGTTTGCCAACACTTTCAATAACATTAAGAGTTTCATCG CAAAATCTATCAGCAAGTTCTGTGACTTTACTGGCACAAAAATTATTTTCTCAGATCTCAGAGA CGAATTCCTCTCATATTTGTATCGTGGCAATGTTGAAGCTGCTCGATTAGAAGGCTTCCTCGTG CATCTTGATGTTGTCCTGAACAATGTATGTGGCATGATCGATGGTACTCTTAGGGATCTTGTGG TATTAAGCATTTGTCGAGCATCAATGGAAGCCTTCACATGGGTGATGCTTAGTGGAGGTCCTTC ACGTGGATTTTCTGATTCAGATATTGTTCTCATTAGGGAAGATCTAGGCATATTGAAGGACTTT TTTATAGCTGATAAAGAAGGCCTTTCCCGTATTTTTGTTGAGAAGGAAGCCGAATTTGCTGAAG AAATATTGGGATTATATTCACTTCCGACTGAAACTATTATCCAATTACTGATGAGTTCAAGTGG GAAAAATTCTACTGAGTTGGATCCATGTGGTAATAATGGCAGTCTTCAATTTAACGATTCCCAG GCATTGGTACGAATCTTGTGCCATAAAAAAGATACGGAAGCTTCTATGTTTCTAAAGCGAAAAT ATAATCTCCCTGCTTCTTCAG
Genomic sequence	ATTGTACAAATTGCCAAGCCTATAATTCTTGACTGGATGATCGATCAGCTGGAACAAACCTCTG AATGGACTGGACGTGCTTTCAAGTTAGAGGTTGGTTATTTGCAGAGTGATTTTTTGGGTTAATA ATTGAGCAGTAAGTAATGTATTATGATACTTGTGTGAGTGAAAGCAGTAGCTTGGCATTTTCTT AATTATGTAAAAAATAGTGAAATTTTCAATATTTCTCCTTCTTATTTACCACCAACAATACTTC ATGTGTAGGATGGCCTCCAAGAAAGGCGAATATAGTTTTTATTCTAATCAAAATCATAAATTTT AGGTCTAAAAGGTTAAAGATACAAGAGAGAGTTTTTTCTAATTAGTTATTTATAAGAATATCCT AACCTTGACATTCATTTACAACACTCCCCTTCAAGATGAGTTGTAATATCATACAATCCAAACT TGTCATTCAAATTTGTAAGTTAGGAATAAAAATAAAAAAAACAAATGCTAAAACAAAAAACTAT ATTTAACCTATAATCTGAAAAGTTCAAACCAAACGGAGAAAGAAAAAAGAAAGACAAAAAAAGA AAAATCAAACGATTAGGTTGGCTTGAAATTGGCTTTTGAGTTTTAGTTGTTGAATTCAATTATG ATTTATAAAATATCTACATATGATCTCTTCTTATATGGATTCAAACAACTGCACAAAGTACAGA ATAATTATTTCAGATTTATATCCTTTTAACACTGCATTCACACCTTTTTAACTAACTTCCATTT TGTGGCAAGTGAAGAACTGGGAGCCGATATCATTTCAGCAAAATTTGGCAGCATCAGTTATTGA AGTTTTTAGAATAATTGAGGAGGTATTATTCCTGTAAAGACATTTACTTTAGTTAGGTTTTAAT GAGAAGAATTTTGGTTTTGTTCCTATGAATTGAAATGATACTTTGGTACTTAAATATTTGAAGT TTGGGAGTGAATAAACTATTTATAGAGATACTGTTACATAGTATGATCAATAAATTTTTACCAC TAAAGTTTATATTCTACCTGGAAATTTGTCTAAGTTGTTAGTGGTGATTCTTATTGGTTTGTCC TGCCTTCTTTTCAAATAATCGATACCATATGCAACTGGTGGAAATAGTAGTAGTTTGCTTGCTG CTACCTTTTTTTTATTTGCCTTTTGAATTTACTATTGAGGTTTAGTGTTATGAAGTTTGTTTAA TATTATGGAATTATAATGAAAAACTTGCAGACTGTTGATCAGTTTTTTGACCTGAACCTTCCGA TGGACATCACACATTTGCAAGCTCTCCTGTCCATTGTCTACCACAGTTTGGATGGCTATTTATC TGGTCTGCTCAACCAGTTAGGTAATTTATGAATTTCTGATTTAGGAAGAATGTGCGTTGATGGA AAACTGAACACACTCAACACACATGAATATATATGATAGGAATCAAGAACTTGTTATTGAATTC AAAAGATACCCTAAGTAAGGTATTATGACCTAATTTTCCTTGCACTGTCAAGACAAGACTCTAT ACTAATGTCAAAAGCAAGATAACTTCCTACCCGATGTCCAACTACATAGTAGTCCCTATTCTAA CCATCTCATCTGTGGTCCCACTAGATGATGGCTCCCCTCCCTAACAAACTCTTTTCCTTTTCGA CCCCTCCACTCATTTATGTATACAACTGGTAGTCTAAAAATACATTTATTAAATATTATCATAA ACCAGCATATGCATGACTAGTGCTTTAATGTACTCCTTTCATTTCTGGAGTTGGAAGACCAAGA TCATGTACGTTTAGCTTATTGGTGATTTGGTTATATTATCTTTCCTTTATTAATCTCTACTCTT TAAATGGTCATTTTATTGGTGATTTGATCATATTATCTTTCATTTGCAGTCGAGAAGAATTGTT TGTATCCACCTGTTCCTCCACTGACTCGTTTTGTGGAGACAGCCACAACAGGAAAGAAAAAGTT GCCTGAATCTCACTTAGATGAGCATGTGAACAGAAAATTGAATGGCCTGACAATATCTAAGCTT TGTATTAAATTGAATACTCTTGGTGTAAGTGATGCTATAATTTACAAGCTTCTTTTCCTCGCTA AATGTGCAGCATGTTTAAAGTTACGTGAGATAATTATCATATTGTAAATACCATACTTTTAATA TCTTGGGCATGGTCTTTGAGATGTGAGGTCTGTTAATGACATTACAATATTGGGGGATGGAAGC TCCCCCTCAAGTCTCTTGTGCAACCATAGTAAACAGCATTCTTAATGGCATTGCCGATTGTTAG TTTTATTTCGTGATATGTCTATTTTCTCTTTATGCAGTATATTCAAAAACAAATTGTAACACTG GAGGACAGAGTTGGAAAATCTTGGGCACTTCTTGGACGATCTGCCAAGCATAAACAGGGTACTT TCATTTAATATTTGTGTTCAATATGCATAGCATTATTGATTGATAAAAGACAGAAACTAGTGAT CTGACTTCATTTTGCTTGGACTAAAGTGCCTATTTTGAAAATTTTAGAGACCAAATATACACCA ACGCCAAACATTTGGGACCAGAAAGTATATTTTGTTAAAAAGGAAAAAAGTTTTTTAGAACCAT TTTTTTCATGTTAAGGACTAAATAGAGACCAATCTCAAGCCTTAGGGACCACGTTTGTTTTCTT TGTCCTAAATGTTTAATCATTTTGAGTACTTTAACAATTTTGCTTGTATACTAAGTTAAAATGA TAAATTGAGTAAGAGTAGTTAAGGAGATAAAGATCACATCAAAGTTTTCTTACATAAAAATCCT GCACAAGGGAAAACATATGGGCACCCGTGCCATGAACAAGTCTACTATGAAAGAATTACAAACT TAGAATTTATGACCCAGATTTACGAGCAACACTTAATTGATGTTCTTTACAGCCCCACTTAAAA TCATGGACCAAGGTGCTTCTAGATTAAAAAATATATATATATAATACATCATTAATCCACAAAG TTTAGATACCCTGTAGCTATTTAAGTTTGAAGGGCACAAACATAATACTAGAGACCAAACGAAG TCTTACTCTTCAAGTTTGTTGATCTCTAAATCCATTGCAAATTAGATAGATGACCTGGACTTGA CGGAAAATTGAGTACTTCTACAACATCTGGACACCTTAAATTGAAGCAATTTTATTTGTTTGTG TATAATAAATTTAGAATGGTTATTCCAACATATTGCCTCTGCTTCATTTAATTTAAAAATGATT TTTTGAAAATATCTGTATCATCATCCAATCAGCCCAGGTAGAGGTTTCCACGACTTCAAATGGT GGTATTGGTACCTTCAGTGACGAAGCTAATGAGTTGTTTGCCAACACTTTCAATAACATTAAGA GTTTCATCGCAAAATCTATCAGCAAGTTCTGTGACTTTACTGGTGAGTTGCAAAAACTGATTTA CATCGGTCAAGATTAGCAACCAATTTTATTTTGTCTTGAAATTTTTTGCAGTTAGTGAGCTTAA GGTATATTAAACATATAATTCGTTGACCCTAACAGTAAAATGCATTGTCTGATTTCCGTAATTT CTATCCAAGTATATCCATAATAGGGGGAACTGGGAAGGACATAGCCTATTTAATTCACACATGG TTTGGTTTTTCCCCGTAAATTTTCCATTCTGTTTGGATCAGGTTGAAGTTATTTTTACACTTCT ATTTTTGGTTTATTTTTAAACTGTAGGAAGATGATTGTAGAATGTAACTGTCAAAATTCTTATT TTTACAATCTTTTTATCTCTGCTTGATAGTCTTTTGATCAAATTCTACTCTCCAGGCACAAAAA TTATTTTCTCAGATCTCAGAGACGAATTCCTCTCATATTTGTATCGTGGCAATGTTGAAGCTGC TCGATTAGAAGGCTTCCTCGTGCATCTTGATGTTGTAAGATCTTTGATTCCCGAAATGTGATAT TTTAGACAATTTTGTCTGGCACACCTTGCATATCTGAACTATAATATTTCTTTATAATTTTCAT TTCTGGGTTGTATTAATCTAATCTGTCTCTTATAGGTCCTGAACAATGTATGTGGCATGATCGA TGGTACTCTTAGGGATCTTGTGGTATTAAGCATTTGTCGAGCATCAATGGTACGCTAATGCTAG TTTTATCTGTTACCTTTTTGAATTTCATCCAATCAATGAAATTATAGATGAAACAATTCTTTTA ACTCTGAGATAGTGGTAAATCTTCCCTTTATAACTTGATCAAACCATTGAAATTATTGTTATTT CTCTTTCCACAAGAAAAAGAAAAAGAAAAAGGAACCCTATTACATTTCACTTTTTCCTCGGAAA TGTATTGTTTTCCAGGAAGCCTTCACATGGGTGATGCTTAGTGGAGGTCCTTCACGTGGATTTT CTGATTCAGATATTGTTCTCATTAGGGAAGATCTAGGCATATTGAAGGTATGTGCGCTAAGTTA TGGAATTCTTGTAACATATAAGGTCATAGCTTCCGTGTAAGTTGAAAAAAAAATGGCTGTATGA TCTTTTGGTTTGCGATAAAAGATTCAGACAATATTGCTTCTTGCATCCGTCAATTTCAGGACTT TTTTATAGCTGATAAAGAAGGCCTTTCCCGTATTTTTGTTGAGAAGGAAGCCGAATTTGCTGAA GAAATATTGGGATTATATTCACTTCCGGTTAGTTTATCTTATTAGTCAAGTTTATATGATAATT AAGTTCCATAGTAGAGGAATTCAGGTGGGCTGCGTTTTCAAATTGTTGCATTTTCCTGCAGACT GAAACTATTATCCAATTACTGATGAGTTCAAGTGGGAAAAATTCTACTGAGTTGGATCCATGTG GTAATAATGGCAGTCTTCAATTTAACGATTCCCAGGCATTGGTACGAATCTTGTGCCATAAAAA AGATACGGAAGCTTCTATGTTTCTAAAGCGAAAATATAATCTCCCTGCTTCTTCAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.464841902

Conservation Information
Conserved circRNAs	NA
PMCS	0.464841902

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							2798552-2798543(+)
						
						Potential amino acid sequence
						
							MIDQLEQTSEWTGRAFKLENWEPISFQQNLAASVIEVFRIIEETVDQFFDLNLPMDITHLQALL
SIVYHSLDGYLSGLLNQLVEKNCLYPPVPPLTRFVETATTGKKKLPESHLDEHVNRKLNGLTIS
KLCIKLNTLGYIQKQIVTLEDRVGKSWALLGRSAKHKQAQVEVSTTSNGGIGTFSDEANELFAN
TFNNIKSFIAKSISKFCDFTGTKIIFSDLRDEFLSYLYRGNVEAARLEGFLVHLDVVLNNVCGM
IDGTLRDLVVLSICRASMEAFTWVMLSGGPSRGFSDSDIVLIREDLGILKDFFIADKEGLSRIF
VEKEAEFAEEILGLYSLPTETIIQLLMSSSGKNSTELDPCGNNGSLQFNDSQALVRILCHKKDT
EASMFLKRKYNLPASSDCTNCQAYNS*
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	2798552-2798543(+)
Potential amino acid sequence	MIDQLEQTSEWTGRAFKLENWEPISFQQNLAASVIEVFRIIEETVDQFFDLNLPMDITHLQALL SIVYHSLDGYLSGLLNQLVEKNCLYPPVPPLTRFVETATTGKKKLPESHLDEHVNRKLNGLTIS KLCIKLNTLGYIQKQIVTLEDRVGKSWALLGRSAKHKQAQVEVSTTSNGGIGTFSDEANELFAN TFNNIKSFIAKSISKFCDFTGTKIIFSDLRDEFLSYLYRGNVEAARLEGFLVHLDVVLNNVCGM IDGTLRDLVVLSICRASMEAFTWVMLSGGPSRGFSDSDIVLIREDLGILKDFFIADKEGLSRIF VEKEAEFAEEILGLYSLPTETIIQLLMSSSGKNSTELDPCGNNGSLQFNDSQALVRILCHKKDT EASMFLKRKYNLPASSDCTNCQAYNS*
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zhu et al., 2019

circRNA

Detail information of Csa3G038750_circ_g.1

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