Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | AT1G12820_circ_g.2 |
ID in PlantcircBase | ath_circ_002302 |
Alias | At_ciR1540 |
Organism | Arabidpsis thaliana |
Position | chr1: 4370329-4370945 JBrowse» |
Reference genome | TAIR10.38 |
Type | ue-circRNA |
Identification method | find_circ |
Parent gene | AT1G12820 |
Parent gene annotation |
Protein AUXIN SIGNALING F-BOX 3 |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | 8 |
Tissues | leaf |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G12820.1:1 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.369435706 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Ye et al., 2015 |