Detail information of AT2G33770_circ_g.5


General Information
CircRNA Name AT2G33770_circ_g.5
ID in PlantcircBase ath_circ_016321
Alias NA
Organism Arabidpsis thaliana
Position chr2: 14282780-14282863  JBrowse»
Reference genome TAIR10.38
Type   u-circRNA
Identification method circRNA_finder
Parent gene AT2G33770
Parent gene annotation Probable ubiquitin-conjugating enzyme E2 24
Parent gene strand -
Alternative splicing NA
Support reads 2
Tissues root
Exon boundary   No-No
Splicing signals   GT-AG
Number of exons covered AT2G33770.1:1
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   ACAGAATTCCCTCTCTGTTTCGTTCTCTCCTTCTCTCTCTCTtctatgacgccattaacgaacc
tccaaaccattgcaaaacca
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence TCTATGACGCCATTAACGAACCTCCAAACCATTGCAAAACCAACAGAATTCCCTCTCTGTTTCG
TTCTCTCCTTCTCTCTCTCT
Conservation Information
Conserved circRNAs NA
PMCS 0.229165074
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Chu et al., 2017