Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d044222_circ_g.1 |
ID in PlantcircBase | zma_circ_001568 |
Alias | circ698 |
Organism | Zea mays |
Position | chr3: 222355276-222358096 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d044222 |
Parent gene annotation |
tetratricopeptide repeat (TPR)-containing protein |
Parent gene strand | + |
Alternative splicing | Zm00001d044222_circ_g.2 Zm00001d044222_circ_g.3 |
Support reads | 2 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d044222_T026:8 Zm00001d044222_T011:7 Zm00001d044222_T022:7 Zm00001d044222_T032:7 Zm00001d044222_T038:2 Zm00001d044222_T020:7 Zm00001d044222_T029:7 Zm00001d044222_T004:7 Zm00001d044222_T001:6 Zm00001d044222_T016:7 Zm00001d044222_T023:7 Zm00001d044222_T012:6 Zm00001d044222_T031:7 Zm00001d044222_T021:8 Zm00001d044222_T030:6 Zm00001d044222_T025:7 Zm00001d044222_T017:7 Zm00001d044222_T009:7 Zm00001d044222_T003:7 Zm00001d044222_T036:4 Zm00001d044222_T013:7 Zm00001d044222_T027:7 Zm00001d044222_T002:6 Zm00001d044222_T034:7 Zm00001d044222_T008:7 Zm00001d044222_T005:8 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.048008481 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |