Splice junction sequence |
TGAGTACAAACTTCATTTACCGCCAAAGCATTTCCTATCAACAGGCGTGGACATACCTGTTATC CAAGAGCGATGTGTACTACTTGACGAGTATATCAAGgttcataaatgagaggattgaagctgct gtaatgtcaaggataaagactactatcagatctagtgctgcagaagaggcttctcagtctgaag atctctca
|
Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
|
Full-length trsnacripts |
Transcript length: 1270 Transcript exons: 5245027-5246050,5246148-5246248,5246324-5246468 GTTCATAAATGAGAGGATTGAAGCTGCTGTAATGTCAAGGATAAAGACTACTATCAGATCTAGT GCTGCAGAAGAGGCTTCTCAGTCTGAAGATCTCTCAAATGTTTCTCCTGATCATTTTTCTAGAT ATATGGACCCCTCTGTCACAGGTGTTGAGCTTGTGCAGTTGAAAAATGAACAGCAAAAAAATTC TAAAAAGAAAAGCGCTACAGATAAACAGCATGTAAAAGAGCTCTCTAAAGATCCATTGCTTTCT ATGGACACTCGATCTTCCCGATCGTGGAACTCTTTCCCCTCAACATCCAAAATAGGTGATGGTA GTAAAGATCCTCAAGGACATCGAGGAGGAGAGGGTTGGGGTGACGTGTTAGACATGATGTCACA AAGGAAAACTGAGACCCTTGCTCCTGAGCATCTTGAAAGCGTGTGGGCAAAAGGAAGAAACTAT AAAAAGAAGGAAGGTGGGAAAGTTGATGAGCGCGTGCCCCCGAGATGGTCTAGCAAGGCTGGTG ACTGCAATGAAAACACTGTGAATGCAAGAGAGTCCAGTCAGCGTAAAGTTGTAAATACAGACAG TCATTTATCAAGTTATTCCTCTGCTGAAGAGGATGAGGAGCAAACAAAGAGTAGTCATTCTTAT ACATCCGAGGATGAGGAAACGGTAACAGGTCTAAACAGTCCTGGGACTCGTGTCTGGGATGGTC GAACGAAGAAAAATCTTGGTGTTTCACGGATACACCATCCACTTGAAAATTCAGGCCGTTCTTT AAAAAAGACCAGTAAAGGGCATGAACGTTATCAGCAAGTACCCGGTCATCAATCTGGCAGGAAG AGATCCAGAATTTCTGGTCATATTATAGACGATGATGATAGTGATGATTCTGAAGATGGTTCTT TGACTAGATCATACAGTGGAATGTCTGCAACGTCATCTACATCATACGTTTCAGCGGCAGAAAG TGACCTTCCCAATGCCCCTAAAAGTTCTTTGTTGGTTGATTCCTTTGCGAAGTTGAGATGTGAG GTTCTGGGTGCCAATATTGTGAAGGGTAGTTCTAAGATGTTTGCTGTGTATTCAGTTGCAGTCA CAGATGAAAGTAATCATAGCTGGTCTATCAAAAGAAGATTTCGACATTTTGAGGAGCTTCACCG ACGGCTAAAAGTGTTTCCTGAGTACAAACTTCATTTACCGCCAAAGCATTTCCTATCAACAGGC GTGGACATACCTGTTATCCAAGAGCGATGTGTACTACTTGACGAGTATATCAAG
|
Genomic sequence |
GTTCATAAATGAGAGGATTGAAGCTGCTGTAATGTCAAGGATAAAGACTACTATCAGATCTAGT GCTGCAGAAGAGGCTTCTCAGTCTGAAGATCTCTCAAATGTTTCTCCTGATCATTTTTCTAGAT ATATGGACCCCTCTGTCACAGGTGTTGAGCTTGTGCAGTTGAAAAATGAACAGCAAAAAAATTC TAAAAAGAAAAGCGCTACAGATAAACAGCATGTAAAAGAGCTCTCTAAAGATCCATTGCTTTCT ATGGACACTCGATCTTCCCGATCGTGGAACTCTTTCCCCTCAACATCCAAAATAGGTGATGGTA GTAAAGATCCTCAAGGACATCGAGGAGGAGAGGGTTGGGGTGACGTGTTAGACATGATGTCACA AAGGAAAACTGAGACCCTTGCTCCTGAGCATCTTGAAAGCGTGTGGGCAAAAGGAAGAAACTAT AAAAAGAAGGAAGGTGGGAAAGTTGATGAGCGCGTGCCCCCGAGATGGTCTAGCAAGGCTGGTG ACTGCAATGAAAACACTGTGAATGCAAGAGAGTCCAGTCAGCGTAAAGTTGTAAATACAGACAG TCATTTATCAAGTTATTCCTCTGCTGAAGAGGATGAGGAGCAAACAAAGAGTAGTCATTCTTAT ACATCCGAGGATGAGGAAACGGTAACAGGTCTAAACAGTCCTGGGACTCGTGTCTGGGATGGTC GAACGAAGAAAAATCTTGGTGTTTCACGGATACACCATCCACTTGAAAATTCAGGCCGTTCTTT AAAAAAGACCAGTAAAGGGCATGAACGTTATCAGCAAGTACCCGGTCATCAATCTGGCAGGAAG AGATCCAGAATTTCTGGTCATATTATAGACGATGATGATAGTGATGATTCTGAAGATGGTTCTT TGACTAGATCATACAGTGGAATGTCTGCAACGTCATCTACATCATACGTTTCAGCGGCAGAAAG TGACCTTCCCAATGCCCCTAAAAGTTCTTTGTTGGTTGATTCCTTTGCGAAGTTGAGATGTGAG GTACAGTTAAATGTCGGTTCCAAACACTCATAAAGCTGCAGACAATTATGTCCTTATGCTGTAT CATACGATAGATAAATTTAGGTTCTTCTTACAGGTTCTGGGTGCCAATATTGTGAAGGGTAGTT CTAAGATGTTTGCTGTGTATTCAGTTGCAGTCACAGATGAAAGTAATCATAGCTGGTCTATCAA AAGAAGGTGATCGAATAATATTGCTACGGATCTGATGTTGGTGCTTTGTCTTTTACAATTTTTA ATTATGTGAACTTTCAGATTTCGACATTTTGAGGAGCTTCACCGACGGCTAAAAGTGTTTCCTG AGTACAAACTTCATTTACCGCCAAAGCATTTCCTATCAACAGGCGTGGACATACCTGTTATCCA AGAGCGATGTGTACTACTTGACGAGTATATCAAG |