Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G15940_circ_g.2 |
ID in PlantcircBase | ath_circ_002839 |
Alias | At_ciR2773 |
Organism | Arabidpsis thaliana |
Position | chr1: 5474899-5475268 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | find_circ |
Parent gene | AT1G15940 |
Parent gene annotation |
T24D18.4 |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | 3 |
Tissues | leaf |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT1G15940.1:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.165803964 |
Functional Information | |
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Coding potential | Y |
Potential coding position |
5474974-5475265(+) |
Potential amino acid sequence |
MEALKSSGTSLDMYSPVVSSICQSEFATTQAHNDVKPKDNEADEKISEGQVVPSDSLEDVSPAA LTLVEKVLSSCTCKLQPCIMEALKSSGTSLDMYSPVVSSICQSEFATTQAHNDVKPKDNEADEK ISEGQVVPSDSLEDVSPAALTLVEKVLSSCTCKLQPCIMEALKSSGTSLDMYSPVVSSICQSEF ATTQAHNDVKPKDNEADEKISEGQVVPSDSLEDVSPAALTLVEKVLSSCTCKLQPCIMEALKSS GTSLDMYSPVVSSICQSEFATTQAHNDVKPKDNEADEKISEGQVVPSDSLE(+) |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015 |