Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d010109_circ_g.1 |
ID in PlantcircBase | zma_circ_002760 |
Alias | circ63 |
Organism | Zea mays |
Position | chr8: 99415302-99417969 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | KNIFE |
Parent gene | Zm00001d010109 |
Parent gene annotation |
LETM1-like protein |
Parent gene strand | - |
Alternative splicing | Zm00001d010109_circ_g.2 Zm00001d010109_circ_g.3 |
Support reads | NA |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d010109_T007:5 Zm00001d010109_T003:6 Zm00001d010109_T009:5 Zm00001d010109_T010:6 Zm00001d010109_T005:5 Zm00001d010109_T001:6 Zm00001d010109_T002:6 Zm00001d010109_T008:6 Zm00001d010109_T011:2 Zm00001d010109_T012:2 Zm00001d010109_T004:6 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.055178489 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | zma-miR167i-3p |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |