Splice junction sequence |
ATTATCTAAAGACGTACTTGTGGTCATCATCAATTCTGAAGGCAATAGAATTATCAGGCAGACT AGCAAATGCTTCAACAACAGCTTGTATGGTTACCACctaaagttagtattccacgatgagcttt cttgagcaggcaaccgagcggaaggcaccaccgccggcgaggctcggctccatcaccaagctga cggcggca
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 210 Transcript exons: 4096078-4096217,4099243-4099312 CTAAAGTTAGTATTCCACGATGAGCTTTCTTGAGCAGGCAACCGAGCGGAAGGCACCACCGCCG GCGAGGCTCGGCTCCATCACCAAGCTGACGGCGGCATCGTCGTCCTTCGCCAACCTCTTCTCCA CCTTCCTCGGGCCAATTCTGAAGGCAATAGAATTATCAGGCAGACTAGCAAATGCTTCAACAAC AGCTTGTATGGTTACCAC
Transcript length: 213 Transcript exons: 4096078-4096202,4099225-4099312 CTAAAGTTAGTATTCCACGATGAGCTTTCTTGAGCAGGCAACCGAGCGGAAGGCACCACCGCCG GCGAGGCTCGGCTCCATCACCAAGCTGACGGCGGCATCGTCGTCCTTCGCCAACCTCTTCTCGT ACTTGTGGTCATCATCAATTCTGAAGGCAATAGAATTATCAGGCAGACTAGCAAATGCTTCAAC AACAGCTTGTATGGTTACCAC
Transcript length: 231 Transcript exons: 4096078-4096163,4099168-4099312 CTAAAGTTAGTATTCCACGATGAGCTTTCTTGAGCAGGCAACCGAGCGGAAGGCACCACCGCCG GCGAGGCTCGGCTCCATCACCATGCCTTCTCTGCATCTTGAGCATCACAATTCACATCAGAGAG GAAATTATCTAAAGACGTACTTGTGGTCATCATCAATTCTGAAGGCAATAGAATTATCAGGCAG ACTAGCAAATGCTTCAACAACAGCTTGTATGGTTACCAC
Transcript length: 232 Transcript exons: 4096078-4096129,4099133-4099312 CTAAAGTTAGTATTCCACGATGAGCTTTCTTGAGCAGGCAACCGAGCGGAAGCTGGAATGGACC GAAGAGGAGAGTCTGGCACAATCTGCCTTCTCTGCATCTTGAGCATCACAATTCACATCAGAGA GGAAATTATCTAAAGACGTACTTGTGGTCATCATCAATTCTGAAGGCAATAGAATTATCAGGCA GACTAGCAAATGCTTCAACAACAGCTTGTATGGTTACCAC
Transcript length: 263 Transcript exons: 4096078-4096215,4099131-4099183,4099241-4099312 CTAAAGTTAGTATTCCACGATGAGCTTTCTTGAGCAGGCAACCGAGCGGAAGGCACCACCGCCG GCGAGGCTCGGCTCCATCACCAAGCTGACGGCGGCATCGTCGTCCTTCGCCAACCTCTTCTCCA CCTTCCTCGGGCCTGGAATGGACCGAAGAGGAGAGTCTGGCACAATCTGCCTTCTCTGCATCTA TCAATTCTGAAGGCAATAGAATTATCAGGCAGACTAGCAAATGCTTCAACAACAGCTTGTATGG TTACCAC
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Genomic sequence |
CTAAAGTTAGTATTCCACGATGAGCTTTCTTGAGCAGGCAACCGAGCGGAAGGCACCACCGCCG GCGAGGCTCGGCTCCATCACCAAGCTGACGGCGGCATCGTCGTCCTTCGCCAACCTCTTCTCCA CCTTCCTCGGGCCAGTGAGCTCCCCCGAGCCGAGGCCGAGGCGCAGCTTCGACGGCGGCGCCAC CGGCGTCGGGCTTGGCATCGTCGCGGCCATGAGCCACGCCTGCCTGACGACCGAGGCCGAGCCG ATCGCCATCGGCGCGGCGGCTCGGCGCCGCGCGAGAGAGGAGGCCGAGCTCTCTGAGAGCTACA CTTGCGTCATCACGCACGTCGCCGGCGTCGATGGCGCCAGCGGCAGCGTGAGGAAGCGGGTGTA CTTTGGGTTCGGCGACGGTGGCGGCGGCTGGCTTGTGGAAGCCGACGAGGAGCCGGCGCCGGCG GCTGACTTCTTGAGCCGGTGCTTCCTGTGTGACAAGAGGCTTGATGGGCTCGACATCTACATGT ACAGGTAAATAAAATTTCATGCATCATAAAAAATATCAAAATTTTGATGAAAATAGTACTATAT TGTTTTGACAATATTATACTTATTGGCACCCAAGGTCTACTTTATGGACTATTCTATATATTGC TTAAAATTTTCAGGAGCTTAAACATTCATTTTGGAATTCTAATTATATTTTTGTATTTATTGGT AACGTGAACCTGCCATTAACTGCGAAGCACACAGCACCTTAGTATAGGTGGGAAAAAAATTCAA AAATAGTTATAAGAAGTTCATTATCTTTCCAGAAAGCAATTGGAAATGCCAAATATCATACATG ATACATTTTACCTTCTAAGTTTTACCTAGTATTTTTTTTTATTTCTAGCTTTTTGGTTGAAGAG GATGTTACGGTTTTGTCTTCCTAAAAGATTAATAGAGTATGTAGTTTGTAGCTTTTTAATTATA GTGAAGTTGCTTTGTTTATGGAAGACAGCTAACCTGCAATACATGTAAAAAGTATATAGTATAT AAGTCTCTAGTCAATCAGAAATAACTAGTGGACATACACCAGATCAATATACAATGTTATATAA CATGGATCCATCATAACCGTGCTTATGTTTTCTTCTTTTTCCTGTGATTAGCATGATAATCTCT AGCCTAAAGAGTGAAAGTGAAGACTTTTCCCTGTTGCTTCAATAAATAACAGATCATATTTTAT TCTCCCTTTTAACTCAATTCAAAACATATTCAATGTAGAATGGGATCATCACTAAAACAACAAG TTCACCAATCACATTTTTAGATGTCACACATTGCTTTGCAATATTACTAGTACTCGTTAAACAT TGGAATTGTCAAAAGTGAGAAAAAGTAGAGCAACCACTTACGTCATTGTGCATGTCTCAAACCT GTAGGGGGGAGAAAGCCTTCTGCAGCTCCGAGTGCAGGTGCCACCAGATGCTAATGGACGACCA TGCAGACAACTGTGGATCTGAAGCCCTCAAGGCCAACGACTACTCGGCCTCGCCGCACTCTGCG CCATTGCCCTTCTCCCTCAGCGTCGCAGCTGCCTAGTCGATCGAATAATCGACTGCATGATGTA GCACCGTCAGGCTGCTCTTCAATTCTGTAGCAGCAAAGAAATATATAGAGAGAGGTCAAAGAGA TCATTTAATTAAGCGGATGAAACATATAAAGAGTAATCACTAGAATGCTTCTTAACTGTGGCTT GAATAAAAAAAAATGGAGAGGATTCTCACACTAAAGAAACAGATTAAACAGATGAAGAAAGTTT TGAGATTATATGCTCACCGCAAGACACTGGAAACTTCGTGCTTGCAATATTATGTACGAGCAGA AGTAATTAGTAAAGGAATTTGATGTTATGTTCTCTTCTGAAATTTCAGTAAGAGAGAGTGTATT ACATATCAGGTGCATAATTGGCTCAGGTAAAAGTTTTATGGTCTAGACGACAGATTTGTTCTAA TGAATAACCGAATTTCAGTATTTCAACTTCCAGTTCTAATTAAGCACTGGTAAATAACACCAGA ATCTGATTTCTAGAGGCAAATTTTGAGTTGCAGATGAGATCCATCTAAGTTACAGATTGTCACA AAAAAACATTGCCTCATCTATCCCAACCACAATTTGCCTCTAGAAAATTGTCATTCTTGCATCT ATGTGGACCATATGGTCCATGCATGTGCAGGCACATTATTTTCATATCTCGTAGAGTGTACTAG GTGCCTAGGTAAGATCAACTTGCAACTTTGACCATTCTTGCTCACGTACACTATGGCAGTATCA CAGATGTTGATGCATCAGGAAAACACCAGGTCATAAAACCTGAATCTTAGTGACATCACTTGGG AGTTGGGACCATCCATTACACAGCAGTATTGGTATGAGCATGCAAGAAAGCTTACCATTTATCA AACAAACAAGATAATAAGTCTGCAGTTGTTCTTACTAATGTATTGCCCTATTTTGCTACTCCCT CCGTCCAATTTTATAGAACGTTTTTTTTTAATTTGGTGTAGTCTTCAAATTAAACTTTAACCAT TAATTTCTCTTACAATATATTTTCAATGGCCACAAAACCAATATCGTGTAAAAACACTCTCAAA TACGAATTTATTAATATAAATTTTATAGACTAAACAGGAATAAAATTTGACTAATTGTTGGCCA AAACTTGAAGACTTTGGGGTTCTTTTTTCAACTACGCCCAATGCTTATACAAACTGAAGAGGGG TAGAATTTTTTGTACTTCTTTTGACAGAAATAACAGTTTTTAATCCCTGGTTGTAAGTCATCAG GTGTACACAAAAAGGTAGCAACAGTGCGGTACTAAAAATGTCCGGGAGGCACGTGCCAATGTAG GCTGCTTTCATACTGACCTGGCACAGAATTTGCTCCCAGGAATAGTTTCTTGGTGGAATACGAG AAGCTTGGATGTGATCTTGCCATCTGTGGAATTAGATTCTATGGCCATTCACTCCATATCAAGA CCACGTTGAGCACCATTTGATTCACTCGATCAGCAGCAAACAGTAGCCTGGAATGGACCGAAGA GGAGAGTCTGGCACAATCTGCCTTCTCTGCATCTTGAGCATCACAATTCACATCAGAGAGGAAA TTATCTAAAGACGTACTTGTGGTCATCATCAATTCTGAAGGCAATAGAATTATCAGGCAGACTA GCAAATGCTTCAACAACAGCTTGTATGGTTACCAC |