Plant Circular RNA Database

Detail information of Os12g0641100_circ_g.5

			
						 General Information
					
						CircRNA Name
						Os12g0641100_circ_g.5
					
						ID in PlantcircBase
						osa_circ_012549
					
						Alias
						Os_ciR2583
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr12: 27498589-27503308  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Os12g0641100						
					
						Parent gene annotation
						
							Similar to Na+/H+ antiporter. (Os12t0641100-01);Similar to Na+/H
+ antiporter. (Os12t0641100-02);Plasma membrane Na+/H+ antiporte
r, Salt stress (Os12t0641100-03);Plasma membrane Na+/H+ antiport
er, Salt tolerance (Os12t0641100-04)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os12g0641100_circ_g.4 Os12g0641100_circ_g.6 						
					
						Support reads
						6
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os12t0641100-02:8
Os12t0641100-03:8
Os12t0641100-04:8

General Information
CircRNA Name	Os12g0641100_circ_g.5
ID in PlantcircBase	osa_circ_012549
Alias	Os_ciR2583
Organism	Oryza sativa
Position	chr12: 27498589-27503308 JBrowse»
Reference genome	IRGSP-1.0.38
Type	u-circRNA
Identification method	find_circ
Parent gene	Os12g0641100
Parent gene annotation	Similar to Na+/H+ antiporter. (Os12t0641100-01);Similar to Na+/H + antiporter. (Os12t0641100-02);Plasma membrane Na+/H+ antiporte r, Salt stress (Os12t0641100-03);Plasma membrane Na+/H+ antiport er, Salt tolerance (Os12t0641100-04)
Parent gene strand	-
Alternative splicing	Os12g0641100_circ_g.4 Os12g0641100_circ_g.6
Support reads	6
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os12t0641100-02:8 Os12t0641100-03:8 Os12t0641100-04:8

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TACCCAAAGTGGCGCAACAATGGATACAAAATAACAACAACTAATATCCGAGAAATTTGCACAA
ATACATAGAGCAGAAGAAGGAAGCCCCATGAAGCACctttactactccaatcgaaacaagccat
ataccagttggccttgagccctctctataaaggattgtgccatgtccttttactgtttcttttg
tgctactt

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1331
Transcript exons: 27498589-27498807,27498913-27499044,27499729-27499826,27
500346-27500648,27501234-27501468,27502795-27502902,2750
2973-27503023,27503124-27503308
CTTTACTACTCCAATCGAAACAAGCCATATACCAGTTGGCCTTGAGCCCTCTCTATAAAGGATT
GTGCCATGTCCTTTTACTGTTTCTTTTGTGCTACTTAATAAAGGATCACGCATCGCAGCAGGCA
GTGCACCAACTAACGGATGAGTGTTCAAAAGATCACTGACTCTTGGCATTTTTACCAATGGTGG
ATTCCTCTTGAACTTCTTCAAGTCTGTCTGCAAAGCATCATCTAGATGGGCCATTTCCTTTTCT
TCCAGCAACCCAGTCTTCTGGAGATTTTGAATATACTCACTCAAGTGGGTCAATACCGAATATG
TTACTTGTCGAGTCTTCAGCACACGAAGCACCTGAGGGAATGTAACACGAACATCTTCCAAGAA
TTTTCTAGCCTCCTCTCCCTCAGCATTACTTTCATCAATAACAATTCTGGCAACCTCACTATCA
CCAAGAAAGTCATGTAGCTGCCGTCTTGCGATTCTATGAGCACGGAGAAATGCAGCACAGATGT
AACATCCTGACTCCAGTCTTTCTACTGTGAAGTAAGTGATAAGCCTTCGTGGCAACCTGCTCAT
TTGAAGGAACCTATAGTAATTTGGAAAATGGACATTGGACCGCAAACCCTTCCAGTCACATAAT
TCTTGGGTAGGAACAAGATCCATAGCTTCATCAACCGATCTCATTAAAATATTTGCAGTGGTTT
GAGTTATTCGTCCTTCTTCAAGCATTCCCCAGTAAGCAGCTTGGACACCATTTAGAAGCCGCAC
ACGGATGTCCCTTAAGTTCATGGTATGCATGCGATCATTTCTGTCAGAAACAGCATGAGGATGC
ACAGGCTCATCGTCCAAGTCGTTCAAGCATGTGATATATTTCTTTACAGTAACCCAATCAGCAG
GAGGACCAAGTTCCTCATCATCCCTAAGATCACCAAAAGCCTCCAATGCCTTGTTTAGCATTTC
ATATTTTGTATAATTCAATATGCGAAGCTTTGTTGCTGCTAATCTGTCCATTCCAAGTAGATGC
AACAAAAATTGTGTAGTAGAACCATTAAAAATCAATGTCAAAAACACGATGCCACCAGTGAAGA
ACACAAACATTGTTCCGTCAACTGGTTTCAGATGGGTCTGAACTGCATCACTAGCACGCTTAAC
AGATAATGATAGAGACAGAGCAACAGCCCCTCGCAGTCCCGCCCAAACAAGAATTGTGGCTTCT
TTCAAGTCCAAACCATACCCAAAGTGGCGCAACAATGGATACAAAATAACAACAACTAATATCC
GAGAAATTTGCACAAATACATAGAGCAGAAGAAGGAAGCCCCATGAAGCAC
						
					

						Genomic sequence
						
							CTTTACTACTCCAATCGAAACAAGCCATATACCAGTTGGCCTTGAGCCCTCTCTATAAAGGATT
GTGCCATGTCCTTTTACTGTTTCTTTTGTGCTACTTAATAAAGGATCACGCATCGCAGCAGGCA
GTGCACCAACTAACGGATGAGTGTTCAAAAGATCACTGACTCTTGGCATTTTTACCAATGGTGG
ATTCCTCTTGAACTTCTTCAAGTCTGTCTGCCAAGTGAATTGACTAGAATTAGTATTTCCATTG
TGATTTGTAACTGAAACAACAAAGTCAGCATAGTAATAATTAAAAGACAAGCAAAATATTCCAG
CCACCTGCAAAGCATCATCTAGATGGGCCATTTCCTTTTCTTCCAGCAACCCAGTCTTCTGGAG
ATTTTGAATATACTCACTCAAGTGGGTCAATACCGAATATGTTACTTGTCGAGTCTTCAGCACA
CGAAGCACCTGAAATTGTGGAACATTTTATTTATGTTGTGGTGTTTCTCTTGGTTAATATAAAG
ATCACCTTAAATATGAAACACTAAGTAAATACTTCGTCTTTTGAACCATAAATAAATATTTTAA
TAACAGTTTGAATTTTGTTGCCTTTCATCTTCTTAATGAAACTTCCTACGTACTATTTTTTGTT
TGTTTGGAGAGTAGGATTTTCACATAAATTTTGCAATAGACAGTACAATTGATATGCCACATCC
TACGTACTATTTTTTGTTTGTTTGGAGAGTAGGATCTTCACATAAATTTTGCAATAGACAGTAC
AATTGATATGCCACATCAAATACACCAATCCAAACTTAAACCATTTCTCAGCATTTTGGTGTCA
TATAAGTACATGTAAAAACCAAAACTAGTCCCATTGCAGTTCAGCTCACCAGCTTATGACAGAA
GTACTATATTTTCCTTCCACCAGCTATTTCAGGAAAGAAGTTAGACTGGCAGGTCCCAGCACAA
CAACTTCATAATTTATAAAGTATAATTTATGACACATGGCATGATAACCTGGACATAGTGCCAT
TATGTCCATGTTTTGGAAAAAGAAAACTGTTAGTAGAATTGGGTATGAAGATTTTATGCTGATG
ACTGTAAACTCCATTAATAATCATATGATGGGAACAAACTGTAACCACAAACCTGAGGGAATGT
AACACGAACATCTTCCAAGAATTTTCTAGCCTCCTCTCCCTCAGCATTACTTTCATCAATAACA
ATTCTGGCAACCTCACTATCACCTGAAGAAAGAAGTGCATAAGAATGGAAACAGGTTCAAAGAG
CACTAGCATGACATGCAAGTCATCTGTACTAATGAAGGTGCATTCCAAATTATTAATAGAAAGA
TGCCTTCAACCAGGCTTCCATAGTAGTAACTTGCAAAACAAAGTAAACTTGACAGGTTCATTCT
TACTCCTTGCGAGATCATTTAAGCCATCCAAATTTCACTCTATAAAGCAGTTTTTCAGAAACAA
AAGCTATACCAACACATCAGGACCTGGCCAGTTTGACACTAAATTCTGTAGGAAGCATAACCCT
ACAGAATTATAGGAAGCATAACCCTTGCTAGAGTATATATATTGCATCTTCATTGCATTTATAA
ACTAAAGCAATGTACACCAAGAATATGTTCCACCCACATATATCTCATATCTCATATGCATATC
ATGTATTCAGGTGGATTTGTCTTTTACTCTTTCTGGAATTAGACCTCCAAATAAATGGCAGCTA
ATATGCACAAACAAACATGAAATTTTTACCAAGAAAGTCATGTAGCTGCCGTCTTGCGATTCTA
TGAGCACGGAGAAATGCAGCACAGATGTAACATCCTGACTCCAGTCTTTCTACTGTGAAGTAAG
TGATAAGCCTTCGTGGCAACCTGCTCATTTGAAGGAACCTATAGTAATTTGGAAAATGGACATT
GGACCGCAAACCCTTCCAGTCACATAATTCTTGGGTAGGAACAAGATCCATAGCTTCATCAACC
GATCTCATTAAAATATTTGCAGTGGTTTGAGTTATTCGTCCTTCTTCAAGCATTCCCCAGTAAG
CAGCTTGGACACCTGTTTTTATTCATTCAGCATAGAACTCCGTAATCTAAGCAGCTTATCTAGA
GAATATAGAACAGTGAGAGAAATATTAATTGAACTATGTGGGAATAAAAAACTGAATGCAACAA
AATGGGTGTAAAAAATGAAAAGATAGGAAGCAAATAAGTCAAAGAAACTCTAATCCATCAATTT
GATAAAGTTTCATCAGAAAAAGAGATGATATATCTTATTGAAAGCCAAGTACCAAACGTATCAC
TAAACCAAAGGAAGCGCCCAAGGTTCAAGTATATCACCAAACAGATTAATAACCAGCAGGCAAT
GTAAAAAGTAAACGATGCATCCTTAGTAAACATACCTAAGCTTTCCATATAGCATGTTACTGGG
AAAAATTAGAGAGCAACTAAGCAAAGTAACTAAAAGGGATATTGAACATAAAACATGACATCAA
ACTTAAAGCCCAACTTGAAATAGCTAAATGATAACAGGAGACAAGAATATAACAAAGGAGTGTA
TTAATATGTGTTCTATTTCGATCTCCAGGAAATATTTGTATCAAATTCCACCATCAGCACATTA
TAATGTAAGGTGATAACATACCATTTAGAAGCCGCACACGGATGTCCCTTAAGTTCATGGTATG
CATGCGATCATTTCTGTCAGAAACAGCATGAGGATGCACAGGCTCATCGTCCAAGTCGTTCAAG
CATGTGATATATTTCTTTACAGTAACCCAATCAGCAGGAGGACCAAGTTCCTCATCATCCCTAA
GATCACCAAAAGCCTCCAATGCCTTGTTTAGCATTTCATATTTTGTATAATTCAATATGCGAAG
CTGCAATAACAATAATGTTAGAATCTTTACCTGGAGTGTGAAGGGAATAACTTACTATATCACT
AGTGGATACCCCCGCGCGTTGCAGCGGGATTTGAGAATTCTTACTGAGAAATATTGTTGATCAA
TCTTCGTGTGTTTCCTTTTTTTACTCATTGGTTGCGTGTTTTTTTTCCGACAAAATAATGTGGA
GTATGTGTTTATCAAGTGGGCCGCTTTCGTCCGTTGGCTGCTAAGAAAGAACGGAAAAAATTTC
TTCTGTTGCTTGCTGGGCCAACAGCCCACTGGGCGGAGACGTCAAGGGAGAGGTTCGTTCCTTT
TTTTTTTTTGCCAATAGCAGACTGGATACATGCGATGTTTGAAGGCCATCCGATCAAGATCTAA
CAGTTAATATGCGCCGATGACGTGGCGAGCTGTGGTGCAAGCTTTATAGCAATTATGACTTAGT
GGGTACTAACTATATAGGAATAAGAGATATACAACCTAAAAATCAACATGACAACACCAAAGAA
AACCTATCCAGCTTGGACTTTGGAGCAGGTGATGGAAGAGGCTTTACAAACAACCGTAATCAGT
AAGAAAGGATCTGCGACTAACTTTTGAATTTATGCATAGTTCAACCATCTTTTCTAGGAGAAAA
GTAAGGGAGTTCTCCACAGGAAAATATTATATAAAATGAGAAATATTAGAAAAGCATTTACAAG
TTCTAAAAGATCAGAAACTGCCAAGAAAAGCAGGGAGAAGCTACAATCAGGGGCATACCTACAT
GCATGTTCCTGGGTGCACATGACCCCGGATAGATTGTTCATCTCTAGCTGTTTTATGCCATCTT
AATAAATTAGTCAATGGTTAGATCATTAGTATGTATAGAACACCCGGTAATTTTTGTTCTAGGT
TCGCCACTGGCTACAATTGCTAATCAAAAGAGTTGAACAGAATGCTTGTTTGGAGAGGATGTTC
ACAGGTAGAACCTTTGATTCTTTGGTGCTGATGGTCATTACAGTTCTTGTCAAGGATAATGAAA
AATCAATCATTCCAGATAAAAAAAATGTCTTTCAACGTTATAGGCAACATGATCATAGTTATGT
ACAAATGCAAAACTGAGAACCCTAAATATTTAAAAAGTGTTGGACTTAAAGGTACTAGACTAAA
ATATATCTCACGTAAAACCTTAAATTTGCCAACTCACTAATTAATACAAAGGAGATGGCAGATT
GGTACCAACTAGAAATCAGAAAGTTTATAAAGCAGAGAAATCTATGGACAAGCAAAAAAATTAT
CCCAACAGGAAAAAAATAATCATAGGTAACAATTCATGAAGCTAACCTTTGTTGCTGCTAATCT
GTCCATTCCAAGTAGATGCAACAAAAATTGTGTAGTAGAACCATTAAAAATCAATGTCAAAAAC
ACGATGCCACCAGTGAAGAACACAAACTGCAAATATGTAGCATTAGTAAAGGTAAAATCAAACA
TTTCAAACTTCTCCATAAAAAAAACAGCATACCATTGTTCCGTCAACTGGTTTCAGATGGGTCT
GAACTGCATCACTAGCACGCTAGTAAAAAAAGGGTAGAAGATTCAGAAATATTTATAGTATAAT
AATGTAAATACAATGAAACAATAAAAGGTTGGCTGGTACAAGGATAATAACTTACCTTAACAGA
TAATGATAGAGACAGAGCAACAGCCCCTCGCAGTCCCGCCCAAACAAGAATTGTGGCTTCTTTC
AAGTCCAAACCATACCCAAAGTGGCGCAACAATGGATACAAAATAACAACAACTAATATCCGAG
AAATTTGCACAAATACATAGAGCAGAAGAAGGAAGCCCCATGAAGCAC
						
					

			
		

Sequences
Splice junction sequence	TACCCAAAGTGGCGCAACAATGGATACAAAATAACAACAACTAATATCCGAGAAATTTGCACAA ATACATAGAGCAGAAGAAGGAAGCCCCATGAAGCACctttactactccaatcgaaacaagccat ataccagttggccttgagccctctctataaaggattgtgccatgtccttttactgtttcttttg tgctactt
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1331 Transcript exons: 27498589-27498807,27498913-27499044,27499729-27499826,27 500346-27500648,27501234-27501468,27502795-27502902,2750 2973-27503023,27503124-27503308 CTTTACTACTCCAATCGAAACAAGCCATATACCAGTTGGCCTTGAGCCCTCTCTATAAAGGATT GTGCCATGTCCTTTTACTGTTTCTTTTGTGCTACTTAATAAAGGATCACGCATCGCAGCAGGCA GTGCACCAACTAACGGATGAGTGTTCAAAAGATCACTGACTCTTGGCATTTTTACCAATGGTGG ATTCCTCTTGAACTTCTTCAAGTCTGTCTGCAAAGCATCATCTAGATGGGCCATTTCCTTTTCT TCCAGCAACCCAGTCTTCTGGAGATTTTGAATATACTCACTCAAGTGGGTCAATACCGAATATG TTACTTGTCGAGTCTTCAGCACACGAAGCACCTGAGGGAATGTAACACGAACATCTTCCAAGAA TTTTCTAGCCTCCTCTCCCTCAGCATTACTTTCATCAATAACAATTCTGGCAACCTCACTATCA CCAAGAAAGTCATGTAGCTGCCGTCTTGCGATTCTATGAGCACGGAGAAATGCAGCACAGATGT AACATCCTGACTCCAGTCTTTCTACTGTGAAGTAAGTGATAAGCCTTCGTGGCAACCTGCTCAT TTGAAGGAACCTATAGTAATTTGGAAAATGGACATTGGACCGCAAACCCTTCCAGTCACATAAT TCTTGGGTAGGAACAAGATCCATAGCTTCATCAACCGATCTCATTAAAATATTTGCAGTGGTTT GAGTTATTCGTCCTTCTTCAAGCATTCCCCAGTAAGCAGCTTGGACACCATTTAGAAGCCGCAC ACGGATGTCCCTTAAGTTCATGGTATGCATGCGATCATTTCTGTCAGAAACAGCATGAGGATGC ACAGGCTCATCGTCCAAGTCGTTCAAGCATGTGATATATTTCTTTACAGTAACCCAATCAGCAG GAGGACCAAGTTCCTCATCATCCCTAAGATCACCAAAAGCCTCCAATGCCTTGTTTAGCATTTC ATATTTTGTATAATTCAATATGCGAAGCTTTGTTGCTGCTAATCTGTCCATTCCAAGTAGATGC AACAAAAATTGTGTAGTAGAACCATTAAAAATCAATGTCAAAAACACGATGCCACCAGTGAAGA ACACAAACATTGTTCCGTCAACTGGTTTCAGATGGGTCTGAACTGCATCACTAGCACGCTTAAC AGATAATGATAGAGACAGAGCAACAGCCCCTCGCAGTCCCGCCCAAACAAGAATTGTGGCTTCT TTCAAGTCCAAACCATACCCAAAGTGGCGCAACAATGGATACAAAATAACAACAACTAATATCC GAGAAATTTGCACAAATACATAGAGCAGAAGAAGGAAGCCCCATGAAGCAC
Genomic sequence	CTTTACTACTCCAATCGAAACAAGCCATATACCAGTTGGCCTTGAGCCCTCTCTATAAAGGATT GTGCCATGTCCTTTTACTGTTTCTTTTGTGCTACTTAATAAAGGATCACGCATCGCAGCAGGCA GTGCACCAACTAACGGATGAGTGTTCAAAAGATCACTGACTCTTGGCATTTTTACCAATGGTGG ATTCCTCTTGAACTTCTTCAAGTCTGTCTGCCAAGTGAATTGACTAGAATTAGTATTTCCATTG TGATTTGTAACTGAAACAACAAAGTCAGCATAGTAATAATTAAAAGACAAGCAAAATATTCCAG CCACCTGCAAAGCATCATCTAGATGGGCCATTTCCTTTTCTTCCAGCAACCCAGTCTTCTGGAG ATTTTGAATATACTCACTCAAGTGGGTCAATACCGAATATGTTACTTGTCGAGTCTTCAGCACA CGAAGCACCTGAAATTGTGGAACATTTTATTTATGTTGTGGTGTTTCTCTTGGTTAATATAAAG ATCACCTTAAATATGAAACACTAAGTAAATACTTCGTCTTTTGAACCATAAATAAATATTTTAA TAACAGTTTGAATTTTGTTGCCTTTCATCTTCTTAATGAAACTTCCTACGTACTATTTTTTGTT TGTTTGGAGAGTAGGATTTTCACATAAATTTTGCAATAGACAGTACAATTGATATGCCACATCC TACGTACTATTTTTTGTTTGTTTGGAGAGTAGGATCTTCACATAAATTTTGCAATAGACAGTAC AATTGATATGCCACATCAAATACACCAATCCAAACTTAAACCATTTCTCAGCATTTTGGTGTCA TATAAGTACATGTAAAAACCAAAACTAGTCCCATTGCAGTTCAGCTCACCAGCTTATGACAGAA GTACTATATTTTCCTTCCACCAGCTATTTCAGGAAAGAAGTTAGACTGGCAGGTCCCAGCACAA CAACTTCATAATTTATAAAGTATAATTTATGACACATGGCATGATAACCTGGACATAGTGCCAT TATGTCCATGTTTTGGAAAAAGAAAACTGTTAGTAGAATTGGGTATGAAGATTTTATGCTGATG ACTGTAAACTCCATTAATAATCATATGATGGGAACAAACTGTAACCACAAACCTGAGGGAATGT AACACGAACATCTTCCAAGAATTTTCTAGCCTCCTCTCCCTCAGCATTACTTTCATCAATAACA ATTCTGGCAACCTCACTATCACCTGAAGAAAGAAGTGCATAAGAATGGAAACAGGTTCAAAGAG CACTAGCATGACATGCAAGTCATCTGTACTAATGAAGGTGCATTCCAAATTATTAATAGAAAGA TGCCTTCAACCAGGCTTCCATAGTAGTAACTTGCAAAACAAAGTAAACTTGACAGGTTCATTCT TACTCCTTGCGAGATCATTTAAGCCATCCAAATTTCACTCTATAAAGCAGTTTTTCAGAAACAA AAGCTATACCAACACATCAGGACCTGGCCAGTTTGACACTAAATTCTGTAGGAAGCATAACCCT ACAGAATTATAGGAAGCATAACCCTTGCTAGAGTATATATATTGCATCTTCATTGCATTTATAA ACTAAAGCAATGTACACCAAGAATATGTTCCACCCACATATATCTCATATCTCATATGCATATC ATGTATTCAGGTGGATTTGTCTTTTACTCTTTCTGGAATTAGACCTCCAAATAAATGGCAGCTA ATATGCACAAACAAACATGAAATTTTTACCAAGAAAGTCATGTAGCTGCCGTCTTGCGATTCTA TGAGCACGGAGAAATGCAGCACAGATGTAACATCCTGACTCCAGTCTTTCTACTGTGAAGTAAG TGATAAGCCTTCGTGGCAACCTGCTCATTTGAAGGAACCTATAGTAATTTGGAAAATGGACATT GGACCGCAAACCCTTCCAGTCACATAATTCTTGGGTAGGAACAAGATCCATAGCTTCATCAACC GATCTCATTAAAATATTTGCAGTGGTTTGAGTTATTCGTCCTTCTTCAAGCATTCCCCAGTAAG CAGCTTGGACACCTGTTTTTATTCATTCAGCATAGAACTCCGTAATCTAAGCAGCTTATCTAGA GAATATAGAACAGTGAGAGAAATATTAATTGAACTATGTGGGAATAAAAAACTGAATGCAACAA AATGGGTGTAAAAAATGAAAAGATAGGAAGCAAATAAGTCAAAGAAACTCTAATCCATCAATTT GATAAAGTTTCATCAGAAAAAGAGATGATATATCTTATTGAAAGCCAAGTACCAAACGTATCAC TAAACCAAAGGAAGCGCCCAAGGTTCAAGTATATCACCAAACAGATTAATAACCAGCAGGCAAT GTAAAAAGTAAACGATGCATCCTTAGTAAACATACCTAAGCTTTCCATATAGCATGTTACTGGG AAAAATTAGAGAGCAACTAAGCAAAGTAACTAAAAGGGATATTGAACATAAAACATGACATCAA ACTTAAAGCCCAACTTGAAATAGCTAAATGATAACAGGAGACAAGAATATAACAAAGGAGTGTA TTAATATGTGTTCTATTTCGATCTCCAGGAAATATTTGTATCAAATTCCACCATCAGCACATTA TAATGTAAGGTGATAACATACCATTTAGAAGCCGCACACGGATGTCCCTTAAGTTCATGGTATG CATGCGATCATTTCTGTCAGAAACAGCATGAGGATGCACAGGCTCATCGTCCAAGTCGTTCAAG CATGTGATATATTTCTTTACAGTAACCCAATCAGCAGGAGGACCAAGTTCCTCATCATCCCTAA GATCACCAAAAGCCTCCAATGCCTTGTTTAGCATTTCATATTTTGTATAATTCAATATGCGAAG CTGCAATAACAATAATGTTAGAATCTTTACCTGGAGTGTGAAGGGAATAACTTACTATATCACT AGTGGATACCCCCGCGCGTTGCAGCGGGATTTGAGAATTCTTACTGAGAAATATTGTTGATCAA TCTTCGTGTGTTTCCTTTTTTTACTCATTGGTTGCGTGTTTTTTTTCCGACAAAATAATGTGGA GTATGTGTTTATCAAGTGGGCCGCTTTCGTCCGTTGGCTGCTAAGAAAGAACGGAAAAAATTTC TTCTGTTGCTTGCTGGGCCAACAGCCCACTGGGCGGAGACGTCAAGGGAGAGGTTCGTTCCTTT TTTTTTTTTGCCAATAGCAGACTGGATACATGCGATGTTTGAAGGCCATCCGATCAAGATCTAA CAGTTAATATGCGCCGATGACGTGGCGAGCTGTGGTGCAAGCTTTATAGCAATTATGACTTAGT GGGTACTAACTATATAGGAATAAGAGATATACAACCTAAAAATCAACATGACAACACCAAAGAA AACCTATCCAGCTTGGACTTTGGAGCAGGTGATGGAAGAGGCTTTACAAACAACCGTAATCAGT AAGAAAGGATCTGCGACTAACTTTTGAATTTATGCATAGTTCAACCATCTTTTCTAGGAGAAAA GTAAGGGAGTTCTCCACAGGAAAATATTATATAAAATGAGAAATATTAGAAAAGCATTTACAAG TTCTAAAAGATCAGAAACTGCCAAGAAAAGCAGGGAGAAGCTACAATCAGGGGCATACCTACAT GCATGTTCCTGGGTGCACATGACCCCGGATAGATTGTTCATCTCTAGCTGTTTTATGCCATCTT AATAAATTAGTCAATGGTTAGATCATTAGTATGTATAGAACACCCGGTAATTTTTGTTCTAGGT TCGCCACTGGCTACAATTGCTAATCAAAAGAGTTGAACAGAATGCTTGTTTGGAGAGGATGTTC ACAGGTAGAACCTTTGATTCTTTGGTGCTGATGGTCATTACAGTTCTTGTCAAGGATAATGAAA AATCAATCATTCCAGATAAAAAAAATGTCTTTCAACGTTATAGGCAACATGATCATAGTTATGT ACAAATGCAAAACTGAGAACCCTAAATATTTAAAAAGTGTTGGACTTAAAGGTACTAGACTAAA ATATATCTCACGTAAAACCTTAAATTTGCCAACTCACTAATTAATACAAAGGAGATGGCAGATT GGTACCAACTAGAAATCAGAAAGTTTATAAAGCAGAGAAATCTATGGACAAGCAAAAAAATTAT CCCAACAGGAAAAAAATAATCATAGGTAACAATTCATGAAGCTAACCTTTGTTGCTGCTAATCT GTCCATTCCAAGTAGATGCAACAAAAATTGTGTAGTAGAACCATTAAAAATCAATGTCAAAAAC ACGATGCCACCAGTGAAGAACACAAACTGCAAATATGTAGCATTAGTAAAGGTAAAATCAAACA TTTCAAACTTCTCCATAAAAAAAACAGCATACCATTGTTCCGTCAACTGGTTTCAGATGGGTCT GAACTGCATCACTAGCACGCTAGTAAAAAAAGGGTAGAAGATTCAGAAATATTTATAGTATAAT AATGTAAATACAATGAAACAATAAAAGGTTGGCTGGTACAAGGATAATAACTTACCTTAACAGA TAATGATAGAGACAGAGCAACAGCCCCTCGCAGTCCCGCCCAAACAAGAATTGTGGCTTCTTTC AAGTCCAAACCATACCCAAAGTGGCGCAACAATGGATACAAAATAACAACAACTAATATCCGAG AAATTTGCACAAATACATAGAGCAGAAGAAGGAAGCCCCATGAAGCAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_010031 						
					
						PMCS
						0.221871368

Conservation Information
Conserved circRNAs	osi_circ_010031
PMCS	0.221871368

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							27498618-27503251(-)
27502977-27503251(-)
						
						Potential amino acid sequence
						
							MACFDWSSKGASWGFLLLLYVFVQISRILVVVILYPLLRHFGYGLDLKEATILVWAGLRGAVAL
SLSLSVKRASDAVQTHLKPVDGTMFVFFTGGIVFLTLIFNGSTTQFLLHLLGMDRLAATKLRIL
NYTKYEMLNKALEAFGDLRDDEELGPPADWVTVKKYITCLNDLDDEPVHPHAVSDRNDRMHTMN
LRDIRVRLLNGVQAAYWGMLEEGRITQTTANILMRSVDEAMDLVPTQELCDWKGLRSNVHFPNY
YRFLQMSRLPRRLITYFTVERLESGCYICAAFLRAHRIARRQLHDFLGDSEVARIVIDESNAEG
EEARKFLEDVRVTFPQVLRVLKTRQVTYSVLTHLSEYIQNLQKTGLLEEKEMAHLDDALQTDLK
KFKRNPPLVKMPRVSDLLNTHPLVGALPAAMRDPLLSSTKETVKGHGTILYREGSRPTGIWLVS
IGVVKVLHGASFFCSMYLCKFLGY*(-)
MFVFFTGGIVFLTLIFNGSTTQFLLHLLGMDRLAATKLRILNYTKYEMLNKALEAFGDLRDDEE
LGPPADWVTVKKYITCLNDLDDEPVHPHAVSDRNDRMHTMNLRDIRVRLLNGVQAAYWGMLEEG
RITQTTANILMRSVDEAMDLVPTQELCDWKGLRSNVHFPNYYRFLQMSRLPRRLITYFTVERLE
SGCYICAAFLRAHRIARRQLHDFLGDSEVARIVIDESNAEGEEARKFLEDVRVTFPQVLRVLKT
RQVTYSVLTHLSEYIQNLQKTGLLEEKEMAHLDDALQTDLKKFKRNPPLVKMPRVSDLLNTHPL
VGALPAAMRDPLLSSTKETVKGHGTILYREGSRPTGIWLVSIGVVKVLHGASFFCSMYLCKFLG
Y*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	27498618-27503251(-) 27502977-27503251(-)
Potential amino acid sequence	MACFDWSSKGASWGFLLLLYVFVQISRILVVVILYPLLRHFGYGLDLKEATILVWAGLRGAVAL SLSLSVKRASDAVQTHLKPVDGTMFVFFTGGIVFLTLIFNGSTTQFLLHLLGMDRLAATKLRIL NYTKYEMLNKALEAFGDLRDDEELGPPADWVTVKKYITCLNDLDDEPVHPHAVSDRNDRMHTMN LRDIRVRLLNGVQAAYWGMLEEGRITQTTANILMRSVDEAMDLVPTQELCDWKGLRSNVHFPNY YRFLQMSRLPRRLITYFTVERLESGCYICAAFLRAHRIARRQLHDFLGDSEVARIVIDESNAEG EEARKFLEDVRVTFPQVLRVLKTRQVTYSVLTHLSEYIQNLQKTGLLEEKEMAHLDDALQTDLK KFKRNPPLVKMPRVSDLLNTHPLVGALPAAMRDPLLSSTKETVKGHGTILYREGSRPTGIWLVS IGVVKVLHGASFFCSMYLCKFLGY(-) MFVFFTGGIVFLTLIFNGSTTQFLLHLLGMDRLAATKLRILNYTKYEMLNKALEAFGDLRDDEE LGPPADWVTVKKYITCLNDLDDEPVHPHAVSDRNDRMHTMNLRDIRVRLLNGVQAAYWGMLEEG RITQTTANILMRSVDEAMDLVPTQELCDWKGLRSNVHFPNYYRFLQMSRLPRRLITYFTVERLE SGCYICAAFLRAHRIARRQLHDFLGDSEVARIVIDESNAEGEEARKFLEDVRVTFPQVLRVLKT RQVTYSVLTHLSEYIQNLQKTGLLEEKEMAHLDDALQTDLKKFKRNPPLVKMPRVSDLLNTHPL VGALPAAMRDPLLSSTKETVKGHGTILYREGSRPTGIWLVSIGVVKVLHGASFFCSMYLCKFLG Y(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015

circRNA

Detail information of Os12g0641100_circ_g.5

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