Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os01g0221100_circ_g.3 |
ID in PlantcircBase | osa_circ_000883 |
Alias | NA |
Organism | Oryza sativa |
Position | chr1: 6628744-6629004 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | e-circRNA |
Identification method | circseq_cup |
Parent gene | Os01g0221100 |
Parent gene annotation |
GH3 auxin-responsive promoter family protein. (Os01t0221100-01); GH3 auxin-responsive promoter family protein. (Os01t0221100-02) |
Parent gene strand | - |
Alternative splicing | Os01g0221100_circ_g.1 Os01g0221100_circ_g.2 Os01g0221100_circ_g.4 |
Support reads | 10 |
Tissues | root |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | Os01t0221100-01:1 Os01t0221100-02:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.294385377 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2016 |