CircRNA Name |
BGIOSGA016052_circ_g.6 |
ID in PlantcircBase |
osi_circ_015185 |
Alias |
Chr04:11594184_11594690(MH63RS2), Chr04:12175815_12176321(ZS97RS2), Chr04:11594184_11594690(MH63RS2) |
Organism |
Oryza sativa ssp. indica |
Position |
chr4: 9703389-9703895 JBrowse» |
Reference genome |
Oryza_indica.ASM465v1.42 |
Type |
ei-circRNA
|
Identification method |
CIRI2, CIRCexplorer2, CIRI2, CIRCexplorer2, CIRI2 |
Parent gene |
BGIOSGA016052 |
Parent gene annotation |
NA |
Parent gene strand |
+ |
Alternative splicing |
BGIOSGA016052_circ_g.1 BGIOSGA016052_circ_g.2 BGIOSGA016052_circ_g.3 BGIOSGA016052_circ_g.4 BGIOSGA016052_circ_g.5 BGIOSGA016052_circ_g.7 BGIOSGA016052_circ_g.8 BGIOSGA016052_circ_g.9 BGIOSGA016052_circ_g.10 BGIOSGA016052_circ_g.11 |
Support reads |
NA |
Tissues |
root, leaf, panicle |
Exon boundary |
No-Yes
"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
|
Splicing signals |
GT-CA
The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
|
Number of exons covered |
BGIOSGA016052-TA:3
|