Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d014943_circ_g.1 |
ID in PlantcircBase | zma_circ_008534 |
Alias | zma_circ_0002165 |
Organism | Zea mays |
Position | chr5: 69320375-69320638 JBrowse» |
Reference genome | AGPv4.38 |
Type | ue-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d014943 |
Parent gene annotation |
Protein transport protein SEC16B homolog |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | NA |
Tissues | leaf, root |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | Zm00001d014943_T019:1 Zm00001d014943_T004:1 Zm00001d014943_T030:1 Zm00001d014943_T017:1 Zm00001d014943_T008:1 Zm00001d014943_T018:1 Zm00001d014943_T005:1 Zm00001d014943_T003:1 Zm00001d014943_T012:1 Zm00001d014943_T036:1 Zm00001d014943_T016:1 Zm00001d014943_T038:1 Zm00001d014943_T032:1 Zm00001d014943_T031:1 Zm00001d014943_T002:1 Zm00001d014943_T026:1 Zm00001d014943_T015:1 Zm00001d014943_T035:1 Zm00001d014943_T001:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.252237374 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ma et al., 2021b |