Detail information of BGIOSGA035260_circ_g.2


General Information
CircRNA Name BGIOSGA035260_circ_g.2
ID in PlantcircBase osi_circ_009017
Alias Chr11:18631256_18631459(MH63RS2)
Organism Oryza sativa ssp. indica
Position chr11: 13328773-13328976  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   i-circRNA
Identification method find_circ
Parent gene BGIOSGA035260
Parent gene annotation NA
Parent gene strand +
Alternative splicing NA
Support reads NA
Tissues root, leaf, panicle
Exon boundary   NA-NA
Splicing signals   GT-CA
Number of exons covered 0
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   AATATTGATAGCCTGCTATATTGTTTTTGTGGGTAAATTTAGTCACTCTGGTATGTCACCCATC
ATTGTTGATAGTCATGCATGGATATTGAAAATACAGggaactggtctattttctcgcattgtac
agttaaagttgctcttatttccttgtcaatttaacagtatgttactgttttaggtttatcttct
gaacaaga
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence GGAACTGGTCTATTTTCTCGCATTGTACAGTTAAAGTTGCTCTTATTTCCTTGTCAATTTAACA
GTATGTTACTGTTTTAGGTTTATCTTCTGAACAAGATACTAATATTGATAGCCTGCTATATTGT
TTTTGTGGGTAAATTTAGTCACTCTGGTATGTCACCCATCATTGTTGATAGTCATGCATGGATA
TTGAAAATACAG
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Zhou et al., 2021