Detail information of BGIOSGA009344_circ_g.5


General Information
CircRNA Name BGIOSGA009344_circ_g.5
ID in PlantcircBase osi_circ_012518
Alias Chr02:36978328_36983072(ZS97RS2)
Organism Oryza sativa ssp. indica
Position chr2: 37864215-37868958  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   ei-circRNA
Identification method CIRCexplorer2
Parent gene BGIOSGA009344
Parent gene annotation NA
Parent gene strand +
Alternative splicing BGIOSGA009344_circ_g.1 BGIOSGA009344_circ_g.2 BGIOSGA009344_circ_g.3 BGIOSGA009344_circ_g.4 BGIOSGA009344_circ_g.6
Support reads NA
Tissues root, leaf, panicle
Exon boundary   No-Yes
Splicing signals   GT-CA
Number of exons covered BGIOSGA009344-TA:8
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   CAAACAGAAAACTAGTCACTTGCGAGTTCTGTTAGCAAAAACTGCATTGAAGAATATTTTACAG
ACAAATTTGGATCTGTTTCCTGCTTGCATAGATCAGggacaagaatcaccgatcaatggcatta
gattgtcttcacaggctagtgaaattttacttaaatgtttatgcagattaccagcctagaaatc
acgtgtgg
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence GGACAAGAATCACCGATCAATGGCATTAGATTGTCTTCACAGGCTAGTGAAATTTTACTTAAAT
GTTTATGCAGATTACCAGCCTAGAAATCACGTGTGGGACTGTTTAGATAGTGTGACATCTCAAT
TGCTGACTGTTTTGAAGAAGGGCTTGCTGACACAAGATGTCCAGCATGATAAACTTGTTGAGTT
TTGTGTGACCTTAGCTGAGAGCAACTTGGATTTTGCAATGAATCATATGATCCTCGAGTTGTTA
AAACCAGATAGTTTAAGTGAAGCAAAGGTTGTTGGTCTTAGGGCTTTGCTTGAGATAGTTGTGT
CTCCATCTAACAAACAAATTGGATTGGATGTCTTCCAAGGTAACACGGTTTTATGAACTGTTCC
ATTCTGTTTAATCTTAAGTATTTTTTGAAAATATTGTAATCAGTATTTTTACTCTTTAATTTCA
GAATATGGTATTGGGCATTATATTCCAAAAGTAAAGTCGGCGATTGAGTCGATTTTACGATCTT
GTAACAAGGCATATAGCTTAGCCCTTCTTACATCATCGAAAGCTACTATAGGTATGCTGCTTCT
TCTCATTGTACAAGGAAATATTCAAATTATTTTCTATTACTTTTGTCAATTTATTTTCATTCAT
CTTTGGAAACTATCGATACTTAAAATTGTGTCACGTGATGCAAATACTCATTCAACTTTCTATT
TTCCCCTTTATTTCATTATTTCTAACATTGGTATTTTCAGATAATGTAACAAAGGATAAATCTC
AGGGATCACTCTTCAGATCTGTGCTGAAATGTATACCATACTTAATAGAAGAGGTGGGACGTAA
TGATAAAATGACCGAGATTATACCTCAGCATGGTATAAGTATTGACCCTGGTGTTCGTGAAGAA
GCAGTGCAAGTTTTGAACAGGATTGTACGATGCTTGCCGAATCGTCGCTTTGCTGTATTGAAAG
GAATGGCCAACTTTATCCTAAAACTTCCTGATGAGTTCCCTCTTTTGATTCAAACATCACTGGG
ACGATTAGTAGAGCTCATGCGCTTGTGGAGAGTATGCCTATCTGAGGAACTTTTGGCAAAAGAC
ATGCAAAATGTTAAGCGTTCTAGTCTAGGAGGCGATGCACTACAGAGGTCTCCTTTTCATAGAT
CCAGGGATGTATCTGAATTCCGTGCCTCGGAAATGGATGCAGTTGGTCTTGTCTTTCTCAGCTC
TGCTGATGTTCAAATAAGGCTTACTGCTTTGGAGTTATTGCGATGTGTTCGAGCGCTAAAAAAT
GAACTCAGGGATTACTCGGCAAATGAATGGGGTGACAGCAAACTGAAGCTTGAACCAGAACCTA
TATTTATTATTGACATCATAGAGGAAAATGGGGTTAGTTTTTTTATATATTTTTCTGTTTGTTT
GGATTTAGGTTTCTTTGAGCTGGACTGTTTGAAATGAAGTAATTTTGCTGGGAAGAAAAGAAAG
TAAATGTTTTCAGCCCTCCAAAATTCCTGTCCCAGTTGGGCCTTAAGAATATCTTTGGCTTCTA
ATGTTATCATTGAACTGTTTCCCATGCTTGATGACTATCTGTCTACATAAATCCACAGGAAGAC
ATAGTTCAAAGCTGTTACTGGGATCCTGGGCGACCTTATGATCTGAGGCGCGAGATGGATCCTG
TTCCCTTGGATGTGACTCTTCAATCCATTTTAGAGAGCGCAGATAAAAGCAGATGGGCCCGTTA
CCTCAGCGAGATTGTCAAATATGCAGCTGAACTTTGCCCAAGCTCTGTGCAGGATGCAAGGCAA
GGACTCTGGGGGTTTCCTGAAATCTTTCTGTGTATTATGATTTACTTTGTGTCAAGCCTCCCTT
TTATTCCCCTCCAATAGCAATCCTGACTTTCCGTTGTTGAATTCAAATTAGGCAGTGTCTTCAC
TGCAGTATGTAAGTACTACACTAAATTGGCACTTAACCAGAAGCTCGTAATATGAATACAATTA
TGTGTCATTGGGATGTTAGAGATCTCCATATAGATGGACTGATGGAAGTTGACTAGCTGAGAGA
CTAGAGACATTTAACAGAGATGCACACCCTTAATTGGTTTATTCATTAACCTTAACTCAAAATA
TGTAGCTTTCTATGGATTGGGTACATTAAGTCATCTTCCAGTTGATTGCCTATTTCTCTAAGAG
CCGCATTTTACATGCACCTTTGCTATTTTGCTAGGTCTCAATTTCTAGACAGTGGTGCTCTCTG
CATTCATTTGATAATTTTGGGCATCTTATAATTGACTTTATTTCATGACTCCGCAGATTAGAGG
TTGTTAGGAGATTAGAACAGATCACTCCGGTCGAACTAGGTGGAAAGGCACAACAATCACAGGA
TACTGAAACTAAGCTCGATCAATGGCTGATATATGCAATGTTTGCATGTTCTTGCCCACCTGAT
AGCAGAGAAGAATTTGCCCTCAGAGCAGCCAGAGAGATCTTCCATATAGTTTTCCCATCACTGC
GCCATGGTTCCGAATCATATGCTGTAAGTCATGTGGTTATATATTTCCAAATGTTTAACTTGCC
TTGCATATGACCATACACAATTGCATGTTTATTATAGCTTGTTCCTCATTCTGTCTGTTAACAT
TCCAAATGTTCTGAATCAAATTAACATTCCAAATGTTTCCTTTTTTTTTTCGTTGATTGTTTTT
TTCTTTTGCACAAAATCTGATTTGTTGAACTGAAACCCCCAACACTCAATTGATAACATTGGTA
AAATCTTTTCTGATTTTGTAATGTTTATTTGAAATGAAAACTAATGTTTTCTAAAGGTTGGAAT
TGTAGTATACTTGCATTACTTATAGCTTTGAGTGCACAGGATATGCAAAGTACAGTTTTTGCCA
TAAGTCATATGAACTAAATGATGCCTGGCATGCCCGTGCAATATTGACATGAAGCATTTAATGA
AATTATGCAAGCGCCTTAGACTAGCATGCTTAGGAGATAGTGAGCTAGCCAAATTAATGTCATT
TTTCTGTGTAGCGGTTTTCCACTAAATATTTAGTTTCAGCATTGGTTAGTTGATTATGGATAAA
GCACTCTAATTGTTTTATCTTTTGCGGTGTTTTCTGTATCTACAGCTTGCTGCTACAGCTGCCC
TTGGGCACTCACATCTGGAAGTATGTGAAATCATGTTTGGTGAACTTACATCTTTCCTTGAGGA
TGTATCATCAGAAACAGAAGCAAAACCAAAGTGGAAGGTACAGCAGATTTACTTTGTTCCAATG
GGCACTATATCAGTTCAGTGAATTAGTCCACACTTTCTCTGCTGTGGCCATCTTCATTTAAGGA
AGGGCATTTATTGCATAGATCTTTCCATATTTCTGGAAAAACTGACTTTTGTTTTTCACCTAAA
ATACCCAGCCTAATTCAACCAAACTGATCACTAATCCATGGTTTTAAGCTATCATCCCAGTTTC
ACTAGCTTATTTTTGTATCGACAGATCTTATTGATCTTTCTCTATTTCTTAATATACCTTTGAG
ACTGTGACTTGGTAGCAACTGCTTAACCTGTATATTTGTAATTCACATGTCTATTTTCCATGGT
AGCCTCTTTACACAATTTTCCACAAGAAGGTACTTTGCCACTTTTATAAATCTCCAAGTACTCC
ATCCGGTCAGGAATACTTGTAGTTTTAGACATACTTTCACGTCGAACTTTAGAAACTTTGAATA
TCATTATCTTTTTACATTCTTAAATTGGATATAGGAGAACCATGTATGTAGATTTGTCTCAGAG
AGTACTTTCATGACATGGAAATTTATTGTGTTATATAAACATAACATATTATATTCTCAGTGGT
CAAAGTTACACTTGTAAGACTGTGTTGATGTCCAAAACAGGAAGTATTTGTGACCAGAGGGAGT
AAACCTTTCATTCATTTCCTCAAATAATTTGAAATTGGTAGTGCTAGCAGTGACCAAATATGTT
TTTCCCTGCAGAATCCTAGGTCCCGCCGTGAGGATCTGCGTACGCATGTCGCAAACATACATAG
AATGATAGCTGAGAAGATTTGGCCTGGAATGCTTAGTCGAAAACCTGTTCTCCGTTTACATTTT
CTAAAGTTCATTGATGAAACATGCCGCCAGATCCTGCCACCATCTGATAACTTTCAAGATTTGC
AGCCTCTCCGATATGCACTAGCATCTGTTCTGAGATATCTAGCTCCAGAATTTATTGATGCAAA
GTCTGAGAGGTTCGACAGCAGATTGCGTAAGAGGCTTTTTGACCTCCTCCTTAGCTGGAGTGAT
GATTCTGGCAGCACTTGGGGACAGGAAGGCAACAGTGACTATCGCCGTGAAATTGAGCGATATA
AAGCTAGCCAGCATAATAGGTCAAGGGAATCACTTGACAAACTTGCATTTGACAGGGAAATGGC
TGAGCAGTTGGAAGCTATCAATTGGGCTTCAATGAATGCCATTGCTTCTTTACTATATGGTCCA
TGCTTTGATGATAATGCAAGGAAACTGAGTGGTCGGGTAATATCGTGGATCAATAGTTTGTTCA
TGGAACTAGCTCCAAGAGCACCTTTTGGGCATTCACCAGTTGATCCCCGAACGCCATCATATTC
AAAGCACACTGATGGGGGACGTTTTGGAGGAAGGGACAAACAGAAAACTAGTCACTTGCGAGTT
CTGTTAGCAAAAACTGCATTGAAGAATATTTTACAGACAAATTTGGATCTGTTTCCTGCTTGCA
TAGATCAG
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Zhou et al., 2021