Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | Zm00001d008654_circ_g.3 |
| ID in PlantcircBase | zma_circ_002691 |
| Alias | circ2717 |
| Organism | Zea mays |
| Position | chr8: 16015384-16020035 JBrowse» |
| Reference genome | AGPv4.38 |
| Type | u-circRNA |
| Identification method | CIRCexplor2 |
| Parent gene | Zm00001d008654 |
| Parent gene annotation |
WD40/YVTN repeat-like-containing domain;Bromodomain |
| Parent gene strand | + |
| Alternative splicing | Zm00001d008654_circ_g.1 Zm00001d008654_circ_g.2 Zm00001d008654_circ_g.4 |
| Support reads | 14 |
| Tissues | seedling leaves |
| Exon boundary | No-Yes |
| Splicing signals | GT-TA |
| Number of exons covered | Zm00001d008654_T017:3 Zm00001d008654_T038:3 Zm00001d008654_T010:3 Zm00001d008654_T001:3 Zm00001d008654_T047:3 Zm00001d008654_T003:3 Zm00001d008654_T012:3 Zm00001d008654_T005:3 Zm00001d008654_T055:3 Zm00001d008654_T014:3 Zm00001d008654_T022:3 Zm00001d008654_T002:3 Zm00001d008654_T004:3 Zm00001d008654_T011:3 Zm00001d008654_T032:3 Zm00001d008654_T007:3 Zm00001d008654_T019:3 Zm00001d008654_T059:3 Zm00001d008654_T041:3 Zm00001d008654_T023:3 Zm00001d008654_T006:3 Zm00001d008654_T016:3 Zm00001d008654_T020:3 Zm00001d008654_T043:3 Zm00001d008654_T015:3 Zm00001d008654_T008:3 Zm00001d008654_T025:3 Zm00001d008654_T009:3 Zm00001d008654_T056:3 Zm00001d008654_T018:3 Zm00001d008654_T034:3 Zm00001d008654_T024:3 Zm00001d008654_T021:3 Zm00001d008654_T051:3 Zm00001d008654_T013:3 |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 0.010694479 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Chen et al., 2017b |