Detail information of BGIOSGA037317_circ_g.5


General Information
CircRNA Name BGIOSGA037317_circ_g.5
ID in PlantcircBase osi_circ_003419
Alias 12:10865261|10865416
Organism Oryza sativa ssp. indica
Position chr12: 10865261-10865416  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   e-circRNA
Identification method find_circ
Parent gene BGIOSGA037317
Parent gene annotation NA
Parent gene strand +
Alternative splicing BGIOSGA037317_circ_g.4 BGIOSGA037317_circ_g.6
Support reads NA
Tissues leaf
Exon boundary   No-No
Splicing signals   CT-AC
Number of exons covered BGIOSGA037317-TA:1
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   GATGATGCCCATCAAATGTCTCATCCTGACACAGATCAGGAGGACCGTGAGATGGATGAAGAGG
AGTTTGACGAGGATatgtcagccgatgatggtgaggaggttgatgaagatgaagacgaggatga
ggatgaagagaacaacaacctggaggag
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence ATGTCAGCCGATGATGGTGAGGAGGTTGATGAAGATGAAGACGAGGATGAGGATGAAGAGAACA
ACAACCTGGAGGAGGATGATGCCCATCAAATGTCTCATCCTGACACAGATCAGGAGGACCGTGA
GATGGATGAAGAGGAGTTTGACGAGGAT
Conservation Information
Conserved circRNAs osa_circ_011331*
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Huang et al., 2021