Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | AT3G02510_circ_g.4 |
ID in PlantcircBase | ath_circ_019312 |
Alias | Chr3:523385|524409 |
Organism | Arabidpsis thaliana |
Position | chr3: 523385-524409 JBrowse» |
Reference genome | TAIR10.38 |
Type | ui-circRNA |
Identification method | CIRCexplorer; CIRI |
Parent gene | AT3G02510 |
Parent gene annotation |
Putative uncharacterized protein At3g02510 |
Parent gene strand | - |
Alternative splicing | AT3G02510_circ_g.1 AT3G02510_circ_g.2 AT3G02510_circ_g.3 AT3G02510_circ_g.5 AT3G02510_circ_g.6 AT3G02510_circ_g.7 AT3G02510_circ_g.8 AT3G02510_circ_g.9 AT3G02510_circ_g.10 |
Support reads | 3 |
Tissues | seedling |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | AT3G02510.1:4 AT3G02510.2:4 AT3G02510.3:4 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.148332049 |
Functional Information | |
---|---|
Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | th-miRf10261-akr NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | responsive to methyl jasmonate |
Other Information | |
---|---|
References | Zhang et al., 2020 |