Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G14820_circ_g.1 |
ID in PlantcircBase | ath_circ_002588 |
Alias | At_ciR3821, AT1G14820_C1 |
Organism | Arabidpsis thaliana |
Position | chr1: 5106163-5106421 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | find_circ, CIRI-full, CIRI2 |
Parent gene | AT1G14820 |
Parent gene annotation |
AT1G14820 protein |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | 2 |
Tissues | leaf |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G14820.3:1 AT1G14820.2:1 AT1G14820.1:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.505648417 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | response to drought stress |
Other Information | |
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References | Ye et al., 2015;Zhang et al., 2019 |