Plant Circular RNA Database

Detail information of Os01g0266000_circ_g.4

			
						 General Information
					
						CircRNA Name
						Os01g0266000_circ_g.4
					
						ID in PlantcircBase
						osa_circ_001249
					
						Alias
						Os_ciR6652
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr1: 9078475-9082773  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, find_circ
					
						Parent gene
						
							Os01g0266000						
					
						Parent gene annotation
						
							RNA-binding protein Lupus La domain containing protein. (Os01t02
66000-01)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os01g0266000_circ_g.3 Os01g0266000_circ_g.5 Os01g0266000_circ_g.6 						
					
						Support reads
						2/1
					
						Tissues
						root/root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os01t0266000-01:10

General Information
CircRNA Name	Os01g0266000_circ_g.4
ID in PlantcircBase	osa_circ_001249
Alias	Os_ciR6652
Organism	Oryza sativa
Position	chr1: 9078475-9082773 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer, find_circ
Parent gene	Os01g0266000
Parent gene annotation	RNA-binding protein Lupus La domain containing protein. (Os01t02 66000-01)
Parent gene strand	+
Alternative splicing	Os01g0266000_circ_g.3 Os01g0266000_circ_g.5 Os01g0266000_circ_g.6
Support reads	2/1
Tissues	root/root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os01t0266000-01:10

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GTTTGGAGAAAAACTTCCAACGCAATGTGTATGAAGATTTCGAGCAGCTGACACTCGAATTCCA
TCACAAGGGTGATCTTTATGGACTCGAAAAATACTGtgatagtaatctggatcatgataatttt
cttaaatctttaatggacgaacatggctgggttccaatttccaaagttgcagacttcaatcggg
tatgtttt

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1572
Transcript exons: 9078475-9078565,9078722-9078793,9078879-9079390,9079854-
9079923,9080514-9080579,9081266-9081570,9081866-9082006,
9082141-9082204,9082429-9082574,9082669-9082773
TGATAGTAATCTGGATCATGATAATTTTCTTAAATCTTTAATGGACGAACATGGCTGGGTTCCA
ATTTCCAAAGTTGCAGACTTCAATCGGCTTAAGAAAATGACCACGGATATACAACTGATTGTAG
AAGCATTGGCAAACTCAAGTCTTTTAGAAGTTCAGGATGGTAATATGAGGCGGCGTTCTGACTG
GTCAAAGTGGGTTTCCTTGTCTGGGACATCTCTTCCGAGTCCATCTTCAACCAGTATGGATAAC
ACTACTGGTGAATGTAATAAGGATGCTTATTCTGAAGATGAAAAGAAGCCTCATCCTCGCAGCG
TAGATTGTGTTGGTATGGGGGCTTCTGATGAGCCATCACATGATACACTCAGTAGTTCAGTCAC
TTCACTGAATAAGGGCTTATCAAACATTAGTATTGATAATAAGCCTAAGAGCATTTCTGCATGC
TCTCTGAACTCACAAAAACATGAAGCTGCTTTTAGGACTGGTGATGTTAAAGTTCAGAAAGTAA
ACACAAAGATCAAAGTGCCTGATTCTCAGAGGGAAAGAGGTTTCTGTAATGATTTCATAAGTGA
CTCTCCTAGCTTCAGCGGCGATCAAAGCACATTCTTGCTTGATGAGGAATTAGAATTGGAGCAT
GCAGAGCTTTCACATGATCTCTATTCGCACAAAAGGGTCGATGATGAGGAAGATGATTTTTATG
TTGATGACCAAGATGTGAACAGGCTAATAATCGTTACGCAGGACGGACCTCAAGCATTTTCAAA
AGAGGAAATATCAAGAATCAATGAGGGGTTATATTACTATGAGAATCACGCTTATAATCAAAGA
AGTTCCCAAGCTGGCACCATAGATATTGATTCTAAACCAGCTGGTGGTTCAAAGGGGAATCCCA
TTAATATTGTAAACAATGGAATTGAAGATTCTGGACAGCCTATCCCACGAAGGAGGCACAACAG
AGGCAATAGAAAAGCACAGTCCTCTCATAAGCAGAGGTTCTTTCCTGGTAACTTTGCGAATAAC
ACCAATAATAGATCTCACTATGGCGGTGTATCAGAGAGCCCCCCAAGCAATTCAATTGGATATT
TCTACGGATCTACTCCAGAAAACCACAGCTATAGAAGTTCAAGGTTGAGCTCATCTCCTCATGG
AATCCCTACTGGTAGCTCGCCTGTTGGTTCTGTGCCCAAATCTTTCCCACCATTTCAACACCCA
AGTCATCAGCTTTTAGAGAAAAATAAATTCCAGCAGCAAAGGTACAATAAGTTCAAAAATCGAT
GCATCGCTGAACGCAAGAAGTTAGGGATCGGTTGCAGTGAGGAAATGAATTCGTTATATCGTTT
TTGGTCGTATTATCTAAGAGATAATTTTAATGATGATATGTACAAACATTTTAAGAAGTTTGCA
CTAGATGACGCGGCAGCAAATTACAGATATGGACTTGAATGTCTCTTCAGATTTTATAGTTATG
GTTTGGAGAAAAACTTCCAACGCAATGTGTATGAAGATTTCGAGCAGCTGACACTCGAATTCCA
TCACAAGGGTGATCTTTATGGACTCGAAAAATACTG
						
					

						Genomic sequence
						
							TGATAGTAATCTGGATCATGATAATTTTCTTAAATCTTTAATGGACGAACATGGCTGGGTTCCA
ATTTCCAAAGTTGCAGACTTCAATCGGGTATGTTTTTCTCAGTACTTAAACTTTTGCTATTTCA
CCTTTATATTATGCCATATAACTACTCTGCTAGTTTGGCTTGTTTAGTTGTTTTGCAGCTTAAG
AAAATTATCAAGGATATACATCTAACAACTCTGTTATTGCTTGGTTCATTTGCAGCTTAAGAAA
ATGACCACGGATATACAACTGATTGTAGAAGCATTGGCAAACTCAAGTCTTTTAGAAGTTCAGG
TACGTTTAATGCAACTATTGTTGCTTAGATCCCTCTTAGAATGTCATCTCTCTTATTTATCTTA
TGCCTTTTGTATACCACCAGGATGGTAATATGAGGCGGCGTTCTGACTGGTCAAAGTGGGTTTC
CTTGTCTGGGACATCTCTTCCGAGTCCATCTTCAACCAGTATGGATAACACTACTGGTGAATGT
AATAAGGATGCTTATTCTGAAGATGAAAAGAAGCCTCATCCTCGCAGCGTAGATTGTGTTGGTA
TGGGGGCTTCTGATGAGCCATCACATGATACACTCAGTAGTTCAGTCACTTCACTGAATAAGGG
CTTATCAAACATTAGTATTGATAATAAGCCTAAGAGCATTTCTGCATGCTCTCTGAACTCACAA
AAACATGAAGCTGCTTTTAGGACTGGTGATGTTAAAGTTCAGAAAGTAAACACAAAGATCAAAG
TGCCTGATTCTCAGAGGGAAAGAGGTTTCTGTAATGATTTCATAAGTGACTCTCCTAGCTTCAG
CGGCGATCAAAGCACATTCTTGCTTGATGAGGAATTAGAATTGGAGCATGCAGAGCTTTCACAT
GATCTCTATTCGCACAAAAGGTGAATTTTAACTAGTTTATATATGATCTGTTACTTCATTTCAT
GAGCTATAATTTGTTGTTTTATTAGTTTGTTATTCATTTGGTAGTTTATAGTGTTGTTATTGTG
ATTTGAGATTAAGGCGATTTTGGTTGTAATTTAGGCTTCCTACTCTGGCCGAAGTGATTATTAT
TTTATGTATTCATTTGTACAGTTTTATGAAATGAAAGATGTATCCAGGCCACTTATGTGAGATG
TGTGCTATACTGCTACACCCTCCTTTTCCATCAGTTAATGTCCTATTATTTGATGAAACTGGAT
ATTCTTCTGTGTTCACATTTTGGAGTGTTAGGCACATGTATTCTCAGAAGTTCAAAAATTGATT
ATATATTTTTTCATGTAATACTGCATCTTTTATCTACTACACTGCAGATTCTAGAAATGGTATG
CATATAATTGATTCTCTTTATGTTTGTTTAAGCAGGGTCGATGATGAGGAAGATGATTTTTATG
TTGATGACCAAGATGTGAACAGGCTAATAATCGTTACGCAGGTTAGATTTCAAGTAGTATTTTG
TATTGCTAGCTCTGTGTAGTGATATACCTCCTTCAGTTTGCAGCTCCTTGCCTTCGTAATCTGA
ACACACTGGGCTTGCCTTTTTTTATGCACCATGCACCAATAAGTTTTGGGACAGTTTCAATGGC
GTTGGATGTTTAACTATTTCTAATTTTCATGTTATGATGATTTACCTGATTTCTTATTTTTTGT
ATTTATAATAGTCTTGCTATTTCCCTTGCTACGAATCCTATTTGAGCAGATTATGTTCATGCTT
AATAATTACATAACAAATAAATAGTTGATTGCTAAGTGAAATTTTATGCTTTATAGGGACATGC
CCTTTTTATTTCATGATTTTTGACTTGATTGAGATACATTTCCATGTACTGTGATATACCATTA
TTTTAACATTATTTGCTTTATAATGACTTGAATTTTCTCATCTCTAAATATTATATGTTAATTA
GCACCTTAGCATCCATCAAGCAAATTTTGCAGCACGCTATCTTGTATGCTTTCACCATGTTAAG
CAAGTCTTGTCTTGGTAATAGTGCAATAAACTCTTGTCAACTATCTGCGTTACAGGACGGACCT
CAAGCATTTTCAAAAGAGGAAATATCAAGAATCAATGAGGGGTTATATTACTATGAGGTAATAT
TTTAGAGCATAAAAAGAACAAGATTATCAGTAATTGGGGTTGTATGTGCATTTTAGGGGCCAAT
ATAATGTTGACACAGTGCTGTGTTGTTTGGGAACTGCCATTCACTCCAACGCTTGTATTTATTA
TTTTATTTTAACAATTACATGCTCAATTTTATGCAAGTAAATAAGCTTTATTTTGGGCATGCAA
TTCAACCCAGTAGGCCAGTATCCTGTTTTATCATGAAGTATCCATAAAATTAAGTAAAATTCCT
GCTCAATTTAATACAATTGTCCAGGCTCTAATTCAGGTTTTCTGTTTTTTAGATTATCATCCCT
TTTCTTTCTCAAGAATTGCCTGCATTTGATACTTGATACATATTATAGCTTTGAGTTATATGTT
AGAAATTAGAAATGTCCCAGTAGCATGAATCTTTCCATGTATAGTGCTGGATTTTTTTTTTTGG
TATGGCTAATCAATTCTTTGAATTTTTGAATCATTTGTACTAAACTGAGTGTTGGGAAAAAGGT
ACGAGACAAGGGTTATCTTGGAGCTAAATCGAATTTAAGTCAAGCCAGGTTGATCCAAACCTGA
GCTGTTCTTGCCTTTCTTTATCCCAAAGCCCTTTCTGGATTTATGCTTGCCTATAAAATTACAT
TATTCTCATGCTAATACATGATATTTATTCTTGCTTTAGAATCACGCTTATAATCAAAGAAGTT
CCCAAGCTGGCACCATAGATATTGATTCTAAACCAGCTGGTGGTTCAAAGGGGAATCCCATTAA
TATTGTAAACAATGGAATTGAAGATTCTGGACAGCCTATCCCACGAAGGAGGCACAACAGAGGC
AATAGAAAAGCACAGTCCTCTCATAAGCAGAGGTTCTTTCCTGGTAACTTTGCGAATAACACCA
ATAATAGATCTCACTATGGCGGTGTATCAGAGAGCCCCCCAAGCAATTCAATTGGATATTTCTA
CGGATCTACTCCAGAAAACCACAGGTTAGGTTAATAAATTAATTGAGGTTTTATTTCTGTAAAA
CAAATACTTATCTCTATGCTTTGTGGCTGGTCATATTGTCATATACCTGCACCATTCTTAGCAA
GAGATTTGAAAACTGAGTACATGATTTGCGCATGACATTTAAGTTTCAAGTTTATACACTTGCA
TGGACAAATCCATCTCTGCCAACCTGTTTTTTTTATTGAAGGTGGACAGACACCCACTGTTATC
ATGAGTGCCTTTTTCATTGAAGCAAAGCTATTGAAGTTATCTTAACTAAGTGTTGTTGTTTAGC
TATAGAAGTTCAAGGTTGAGCTCATCTCCTCATGGAATCCCTACTGGTAGCTCGCCTGTTGGTT
CTGTGCCCAAATCTTTCCCACCATTTCAACACCCAAGTCATCAGCTTTTAGAGAAAAATAAATT
CCAGCAGCAAAGGTAAGCTGTCAGTATAGATCTCAATTGAGTTGCAGTTCTTTCTAGTACTCAT
TCCTTTGCAAGTGTATTACTACCCTTTATTCGTTGTTTCATAGTAAATTGATCCGTTTTAATGT
TTTCTTCTGCATGTAAAGGTACAATAAGTTCAAAAATCGATGCATCGCTGAACGCAAGAAGTTA
GGGATCGGTTGCAGTGAGGTGCAACTTCCTCGCACATCTCTCTTTCTATGGCAACGTTCTAACT
AGATATACATAAATCTGACCAAGCTCATTTATTACTCTCTTTGAATCATTTTCTTCATATGTGA
AATCATTTGGTGTTACTATTGTTTTGGCAATTATTACTGATTATATGCCGCATGAATACTTGTT
CTGTTTATTGATTATATACTGATGCTCTTCTATCTTCCAATGTAATGCAGGAAATGAATTCGTT
ATATCGTTTTTGGTCGTATTATCTAAGAGATAATTTTAATGATGATATGTACAAACATTTTAAG
AAGTTTGCACTAGATGACGCGGCAGCAAATTACAGATATGGACTTGAATGTCTCTTCAGATTTT
ATAGGTACGGTACATAAAAATTTTATAGTAATATTCCCATTTTTTTCCTTGCATTCCATAATAT
AGCAGCAATGTTCACTGCCTGCTTGTATTTACAGTTATGGTTTGGAGAAAAACTTCCAACGCAA
TGTGTATGAAGATTTCGAGCAGCTGACACTCGAATTCCATCACAAGGGTGATCTTTATGGACTC
GAAAAATACTG
						
					

			
		

Sequences
Splice junction sequence	GTTTGGAGAAAAACTTCCAACGCAATGTGTATGAAGATTTCGAGCAGCTGACACTCGAATTCCA TCACAAGGGTGATCTTTATGGACTCGAAAAATACTGtgatagtaatctggatcatgataatttt cttaaatctttaatggacgaacatggctgggttccaatttccaaagttgcagacttcaatcggg tatgtttt
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1572 Transcript exons: 9078475-9078565,9078722-9078793,9078879-9079390,9079854- 9079923,9080514-9080579,9081266-9081570,9081866-9082006, 9082141-9082204,9082429-9082574,9082669-9082773 TGATAGTAATCTGGATCATGATAATTTTCTTAAATCTTTAATGGACGAACATGGCTGGGTTCCA ATTTCCAAAGTTGCAGACTTCAATCGGCTTAAGAAAATGACCACGGATATACAACTGATTGTAG AAGCATTGGCAAACTCAAGTCTTTTAGAAGTTCAGGATGGTAATATGAGGCGGCGTTCTGACTG GTCAAAGTGGGTTTCCTTGTCTGGGACATCTCTTCCGAGTCCATCTTCAACCAGTATGGATAAC ACTACTGGTGAATGTAATAAGGATGCTTATTCTGAAGATGAAAAGAAGCCTCATCCTCGCAGCG TAGATTGTGTTGGTATGGGGGCTTCTGATGAGCCATCACATGATACACTCAGTAGTTCAGTCAC TTCACTGAATAAGGGCTTATCAAACATTAGTATTGATAATAAGCCTAAGAGCATTTCTGCATGC TCTCTGAACTCACAAAAACATGAAGCTGCTTTTAGGACTGGTGATGTTAAAGTTCAGAAAGTAA ACACAAAGATCAAAGTGCCTGATTCTCAGAGGGAAAGAGGTTTCTGTAATGATTTCATAAGTGA CTCTCCTAGCTTCAGCGGCGATCAAAGCACATTCTTGCTTGATGAGGAATTAGAATTGGAGCAT GCAGAGCTTTCACATGATCTCTATTCGCACAAAAGGGTCGATGATGAGGAAGATGATTTTTATG TTGATGACCAAGATGTGAACAGGCTAATAATCGTTACGCAGGACGGACCTCAAGCATTTTCAAA AGAGGAAATATCAAGAATCAATGAGGGGTTATATTACTATGAGAATCACGCTTATAATCAAAGA AGTTCCCAAGCTGGCACCATAGATATTGATTCTAAACCAGCTGGTGGTTCAAAGGGGAATCCCA TTAATATTGTAAACAATGGAATTGAAGATTCTGGACAGCCTATCCCACGAAGGAGGCACAACAG AGGCAATAGAAAAGCACAGTCCTCTCATAAGCAGAGGTTCTTTCCTGGTAACTTTGCGAATAAC ACCAATAATAGATCTCACTATGGCGGTGTATCAGAGAGCCCCCCAAGCAATTCAATTGGATATT TCTACGGATCTACTCCAGAAAACCACAGCTATAGAAGTTCAAGGTTGAGCTCATCTCCTCATGG AATCCCTACTGGTAGCTCGCCTGTTGGTTCTGTGCCCAAATCTTTCCCACCATTTCAACACCCA AGTCATCAGCTTTTAGAGAAAAATAAATTCCAGCAGCAAAGGTACAATAAGTTCAAAAATCGAT GCATCGCTGAACGCAAGAAGTTAGGGATCGGTTGCAGTGAGGAAATGAATTCGTTATATCGTTT TTGGTCGTATTATCTAAGAGATAATTTTAATGATGATATGTACAAACATTTTAAGAAGTTTGCA CTAGATGACGCGGCAGCAAATTACAGATATGGACTTGAATGTCTCTTCAGATTTTATAGTTATG GTTTGGAGAAAAACTTCCAACGCAATGTGTATGAAGATTTCGAGCAGCTGACACTCGAATTCCA TCACAAGGGTGATCTTTATGGACTCGAAAAATACTG
Genomic sequence	TGATAGTAATCTGGATCATGATAATTTTCTTAAATCTTTAATGGACGAACATGGCTGGGTTCCA ATTTCCAAAGTTGCAGACTTCAATCGGGTATGTTTTTCTCAGTACTTAAACTTTTGCTATTTCA CCTTTATATTATGCCATATAACTACTCTGCTAGTTTGGCTTGTTTAGTTGTTTTGCAGCTTAAG AAAATTATCAAGGATATACATCTAACAACTCTGTTATTGCTTGGTTCATTTGCAGCTTAAGAAA ATGACCACGGATATACAACTGATTGTAGAAGCATTGGCAAACTCAAGTCTTTTAGAAGTTCAGG TACGTTTAATGCAACTATTGTTGCTTAGATCCCTCTTAGAATGTCATCTCTCTTATTTATCTTA TGCCTTTTGTATACCACCAGGATGGTAATATGAGGCGGCGTTCTGACTGGTCAAAGTGGGTTTC CTTGTCTGGGACATCTCTTCCGAGTCCATCTTCAACCAGTATGGATAACACTACTGGTGAATGT AATAAGGATGCTTATTCTGAAGATGAAAAGAAGCCTCATCCTCGCAGCGTAGATTGTGTTGGTA TGGGGGCTTCTGATGAGCCATCACATGATACACTCAGTAGTTCAGTCACTTCACTGAATAAGGG CTTATCAAACATTAGTATTGATAATAAGCCTAAGAGCATTTCTGCATGCTCTCTGAACTCACAA AAACATGAAGCTGCTTTTAGGACTGGTGATGTTAAAGTTCAGAAAGTAAACACAAAGATCAAAG TGCCTGATTCTCAGAGGGAAAGAGGTTTCTGTAATGATTTCATAAGTGACTCTCCTAGCTTCAG CGGCGATCAAAGCACATTCTTGCTTGATGAGGAATTAGAATTGGAGCATGCAGAGCTTTCACAT GATCTCTATTCGCACAAAAGGTGAATTTTAACTAGTTTATATATGATCTGTTACTTCATTTCAT GAGCTATAATTTGTTGTTTTATTAGTTTGTTATTCATTTGGTAGTTTATAGTGTTGTTATTGTG ATTTGAGATTAAGGCGATTTTGGTTGTAATTTAGGCTTCCTACTCTGGCCGAAGTGATTATTAT TTTATGTATTCATTTGTACAGTTTTATGAAATGAAAGATGTATCCAGGCCACTTATGTGAGATG TGTGCTATACTGCTACACCCTCCTTTTCCATCAGTTAATGTCCTATTATTTGATGAAACTGGAT ATTCTTCTGTGTTCACATTTTGGAGTGTTAGGCACATGTATTCTCAGAAGTTCAAAAATTGATT ATATATTTTTTCATGTAATACTGCATCTTTTATCTACTACACTGCAGATTCTAGAAATGGTATG CATATAATTGATTCTCTTTATGTTTGTTTAAGCAGGGTCGATGATGAGGAAGATGATTTTTATG TTGATGACCAAGATGTGAACAGGCTAATAATCGTTACGCAGGTTAGATTTCAAGTAGTATTTTG TATTGCTAGCTCTGTGTAGTGATATACCTCCTTCAGTTTGCAGCTCCTTGCCTTCGTAATCTGA ACACACTGGGCTTGCCTTTTTTTATGCACCATGCACCAATAAGTTTTGGGACAGTTTCAATGGC GTTGGATGTTTAACTATTTCTAATTTTCATGTTATGATGATTTACCTGATTTCTTATTTTTTGT ATTTATAATAGTCTTGCTATTTCCCTTGCTACGAATCCTATTTGAGCAGATTATGTTCATGCTT AATAATTACATAACAAATAAATAGTTGATTGCTAAGTGAAATTTTATGCTTTATAGGGACATGC CCTTTTTATTTCATGATTTTTGACTTGATTGAGATACATTTCCATGTACTGTGATATACCATTA TTTTAACATTATTTGCTTTATAATGACTTGAATTTTCTCATCTCTAAATATTATATGTTAATTA GCACCTTAGCATCCATCAAGCAAATTTTGCAGCACGCTATCTTGTATGCTTTCACCATGTTAAG CAAGTCTTGTCTTGGTAATAGTGCAATAAACTCTTGTCAACTATCTGCGTTACAGGACGGACCT CAAGCATTTTCAAAAGAGGAAATATCAAGAATCAATGAGGGGTTATATTACTATGAGGTAATAT TTTAGAGCATAAAAAGAACAAGATTATCAGTAATTGGGGTTGTATGTGCATTTTAGGGGCCAAT ATAATGTTGACACAGTGCTGTGTTGTTTGGGAACTGCCATTCACTCCAACGCTTGTATTTATTA TTTTATTTTAACAATTACATGCTCAATTTTATGCAAGTAAATAAGCTTTATTTTGGGCATGCAA TTCAACCCAGTAGGCCAGTATCCTGTTTTATCATGAAGTATCCATAAAATTAAGTAAAATTCCT GCTCAATTTAATACAATTGTCCAGGCTCTAATTCAGGTTTTCTGTTTTTTAGATTATCATCCCT TTTCTTTCTCAAGAATTGCCTGCATTTGATACTTGATACATATTATAGCTTTGAGTTATATGTT AGAAATTAGAAATGTCCCAGTAGCATGAATCTTTCCATGTATAGTGCTGGATTTTTTTTTTTGG TATGGCTAATCAATTCTTTGAATTTTTGAATCATTTGTACTAAACTGAGTGTTGGGAAAAAGGT ACGAGACAAGGGTTATCTTGGAGCTAAATCGAATTTAAGTCAAGCCAGGTTGATCCAAACCTGA GCTGTTCTTGCCTTTCTTTATCCCAAAGCCCTTTCTGGATTTATGCTTGCCTATAAAATTACAT TATTCTCATGCTAATACATGATATTTATTCTTGCTTTAGAATCACGCTTATAATCAAAGAAGTT CCCAAGCTGGCACCATAGATATTGATTCTAAACCAGCTGGTGGTTCAAAGGGGAATCCCATTAA TATTGTAAACAATGGAATTGAAGATTCTGGACAGCCTATCCCACGAAGGAGGCACAACAGAGGC AATAGAAAAGCACAGTCCTCTCATAAGCAGAGGTTCTTTCCTGGTAACTTTGCGAATAACACCA ATAATAGATCTCACTATGGCGGTGTATCAGAGAGCCCCCCAAGCAATTCAATTGGATATTTCTA CGGATCTACTCCAGAAAACCACAGGTTAGGTTAATAAATTAATTGAGGTTTTATTTCTGTAAAA CAAATACTTATCTCTATGCTTTGTGGCTGGTCATATTGTCATATACCTGCACCATTCTTAGCAA GAGATTTGAAAACTGAGTACATGATTTGCGCATGACATTTAAGTTTCAAGTTTATACACTTGCA TGGACAAATCCATCTCTGCCAACCTGTTTTTTTTATTGAAGGTGGACAGACACCCACTGTTATC ATGAGTGCCTTTTTCATTGAAGCAAAGCTATTGAAGTTATCTTAACTAAGTGTTGTTGTTTAGC TATAGAAGTTCAAGGTTGAGCTCATCTCCTCATGGAATCCCTACTGGTAGCTCGCCTGTTGGTT CTGTGCCCAAATCTTTCCCACCATTTCAACACCCAAGTCATCAGCTTTTAGAGAAAAATAAATT CCAGCAGCAAAGGTAAGCTGTCAGTATAGATCTCAATTGAGTTGCAGTTCTTTCTAGTACTCAT TCCTTTGCAAGTGTATTACTACCCTTTATTCGTTGTTTCATAGTAAATTGATCCGTTTTAATGT TTTCTTCTGCATGTAAAGGTACAATAAGTTCAAAAATCGATGCATCGCTGAACGCAAGAAGTTA GGGATCGGTTGCAGTGAGGTGCAACTTCCTCGCACATCTCTCTTTCTATGGCAACGTTCTAACT AGATATACATAAATCTGACCAAGCTCATTTATTACTCTCTTTGAATCATTTTCTTCATATGTGA AATCATTTGGTGTTACTATTGTTTTGGCAATTATTACTGATTATATGCCGCATGAATACTTGTT CTGTTTATTGATTATATACTGATGCTCTTCTATCTTCCAATGTAATGCAGGAAATGAATTCGTT ATATCGTTTTTGGTCGTATTATCTAAGAGATAATTTTAATGATGATATGTACAAACATTTTAAG AAGTTTGCACTAGATGACGCGGCAGCAAATTACAGATATGGACTTGAATGTCTCTTCAGATTTT ATAGGTACGGTACATAAAAATTTTATAGTAATATTCCCATTTTTTTCCTTGCATTCCATAATAT AGCAGCAATGTTCACTGCCTGCTTGTATTTACAGTTATGGTTTGGAGAAAAACTTCCAACGCAA TGTGTATGAAGATTTCGAGCAGCTGACACTCGAATTCCATCACAAGGGTGATCTTTATGGACTC GAAAAATACTG

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_011506 						
					
						PMCS
						0.202667145

Conservation Information
Conserved circRNAs	osi_circ_011506
PMCS	0.202667145

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							9078516-9082770(+)
9078495-9082518(-)
						
					

						Potential amino acid sequence
						
							MDEHGWVPISKVADFNRLKKMTTDIQLIVEALANSSLLEVQDGNMRRRSDWSKWVSLSGTSLPS
PSSTSMDNTTGECNKDAYSEDEKKPHPRSVDCVGMGASDEPSHDTLSSSVTSLNKGLSNISIDN
KPKSISACSLNSQKHEAAFRTGDVKVQKVNTKIKVPDSQRERGFCNDFISDSPSFSGDQSTFLL
DEELELEHAELSHDLYSHKRVDDEEDDFYVDDQDVNRLIIVTQDGPQAFSKEEISRINEGLYYY
ENHAYNQRSSQAGTIDIDSKPAGGSKGNPINIVNNGIEDSGQPIPRRRHNRGNRKAQSSHKQRF
FPGNFANNTNNRSHYGGVSESPPSNSIGYFYGSTPENHSYRSSRLSSSPHGIPTGSSPVGSVPK
SFPPFQHPSHQLLEKNKFQQQRYNKFKNRCIAERKKLGIGCSEEMNSLYRFWSYYLRDNFNDDM
YKHFKKFALDDAAANYRYGLECLFRFYSYGLEKNFQRNVYEDFEQLTLEFHHKGDLYGLEKYCD
SNLDHDNFLKSLMDEHGWVPISKVADFNRLKKMTTDIQLIVEALANSSLLEVQDGNMRRRSDWS
KWVSLSGTSLPSPSSTSMDNTTGECNKDAYSEDEKKPHPRSVDCVGMGASDEPSHDTLSSSVTS
LNKGLSNISIDNKPKSISACSLNSQKHEAAFRTGDVKVQKVNTKIKVPDSQRERGFCNDFISDS
PSFSGDQSTFLLDEELELEHAELSHDLYSHKRVDDEEDDFYVDDQDVNRLIIVTQDGPQAFSKE
EISRINEGLYYYENHAYNQRSSQAGTIDIDSKPAGGSKGNPINIVNNGIEDSGQPIPRRRHNRG
NRKAQSSHKQRFFPGNFANNTNNRSHYGGVSESPPSNSIGYFYGSTPENHSYRSSRLSSSPHGI
PTGSSPVGSVPKSFPPFQHPSHQLLEKNKFQQQRYNKFKNRCIAERKKLGIGCSEEMNSLYRFW
SYYLRDNFNDDMYKHFKKFALDDAAANYRYGLECLFRFYSYGLEKNFQRNVYEDFEQLTLEFHH
KGDLYGLEKYCDSNLDHDNFLKSLMDEHGWVPISKVADFNRLKKMTTDIQLIVEALANSSLLEV
QDGNMRRRSDWSKWVSLSGTSLPSPSSTSMDNTTGECNKDAYSEDEKKPHPRSVDCVGMGASDE
PSHDTLSSSVTSLNKGLSNISIDNKPKSISACSLNSQKHEAAFRTGDVKVQKVNTKIKVPDSQR
ERGFCNDFISDSPSFSGDQSTFLLDEELELEHAELSHDLYSHKRVDDEEDDFYVDDQDVNRLII
VTQDGPQAFSKEEISRINEGLYYYENHAYNQRSSQAGTIDIDSKPAGGSKGNPINIVNNGIEDS
GQPIPRRRHNRGNRKAQSSHKQRFFPGNFANNTNNRSHYGGVSESPPSNSIGYFYGSTPENHSY
RSSRLSSSPHGIPTGSSPVGSVPKSFPPFQHPSHQLLEKNKFQQQRYNKFKNRCIAERKKLGIG
CSEEMNSLYRFWSYYLRDNFNDDMYKHFKKFALDDAAANYRYGLECLFRFYSYGLEKNFQRNVY
EDFEQLTLEFHHKGDLYGLEKYCDSNLDHDNFLKSLMDEHGWVPISKVADFNRLKKMTTDIQLI
VEALANSSLLEVQDGNMRRRSDWSKWVSLSGTSLPSPSSTSMDNTTGECNKDAYSEDEKKPHPR
SVDCVGMGASDEPSHDTLSSSVTSLNKGLSNISIDNKPKSISACSLNSQKHEAAFRTGDVKVQK
VNTKIKVPDSQRERGFCNDFISDSPSFSGDQSTFLLDEELELEHAELSHDLYSHKRVDDEEDDF
YVDDQDVNRLIIVTQDGPQAFSKEEISRINEGLYYYENHAYNQRSSQAGTIDIDSKPAGGSKGN
PINIVNNGIEDSGQPIPRRRHNRGNRKAQSSHKQRFFPGNFANNTNNRSHYGGVSESPPSNSIG
YFYGSTPENHSYRSSRLSSSPHGIPTGSSPVGSVPKSFPPFQHPSHQLLEKNKFQQQRYNKFKN
RCIAERKKLGIGCSEEMNSLYRFWSYYLRDNFNDDMYKHFKKFALDDAAANYRYGLECLFRFYS
YGLEKNFQRNVYEDFEQLTLEFHHKGDLYGLEKY(+)
MIQITITVFFESIKITLVMEFECQLLEIFIHIALEVFLQTITIKSEETFKSISVICCRVI*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	9078516-9082770(+) 9078495-9082518(-)
Potential amino acid sequence	MDEHGWVPISKVADFNRLKKMTTDIQLIVEALANSSLLEVQDGNMRRRSDWSKWVSLSGTSLPS PSSTSMDNTTGECNKDAYSEDEKKPHPRSVDCVGMGASDEPSHDTLSSSVTSLNKGLSNISIDN KPKSISACSLNSQKHEAAFRTGDVKVQKVNTKIKVPDSQRERGFCNDFISDSPSFSGDQSTFLL DEELELEHAELSHDLYSHKRVDDEEDDFYVDDQDVNRLIIVTQDGPQAFSKEEISRINEGLYYY ENHAYNQRSSQAGTIDIDSKPAGGSKGNPINIVNNGIEDSGQPIPRRRHNRGNRKAQSSHKQRF FPGNFANNTNNRSHYGGVSESPPSNSIGYFYGSTPENHSYRSSRLSSSPHGIPTGSSPVGSVPK SFPPFQHPSHQLLEKNKFQQQRYNKFKNRCIAERKKLGIGCSEEMNSLYRFWSYYLRDNFNDDM YKHFKKFALDDAAANYRYGLECLFRFYSYGLEKNFQRNVYEDFEQLTLEFHHKGDLYGLEKYCD SNLDHDNFLKSLMDEHGWVPISKVADFNRLKKMTTDIQLIVEALANSSLLEVQDGNMRRRSDWS KWVSLSGTSLPSPSSTSMDNTTGECNKDAYSEDEKKPHPRSVDCVGMGASDEPSHDTLSSSVTS LNKGLSNISIDNKPKSISACSLNSQKHEAAFRTGDVKVQKVNTKIKVPDSQRERGFCNDFISDS PSFSGDQSTFLLDEELELEHAELSHDLYSHKRVDDEEDDFYVDDQDVNRLIIVTQDGPQAFSKE EISRINEGLYYYENHAYNQRSSQAGTIDIDSKPAGGSKGNPINIVNNGIEDSGQPIPRRRHNRG NRKAQSSHKQRFFPGNFANNTNNRSHYGGVSESPPSNSIGYFYGSTPENHSYRSSRLSSSPHGI PTGSSPVGSVPKSFPPFQHPSHQLLEKNKFQQQRYNKFKNRCIAERKKLGIGCSEEMNSLYRFW SYYLRDNFNDDMYKHFKKFALDDAAANYRYGLECLFRFYSYGLEKNFQRNVYEDFEQLTLEFHH KGDLYGLEKYCDSNLDHDNFLKSLMDEHGWVPISKVADFNRLKKMTTDIQLIVEALANSSLLEV QDGNMRRRSDWSKWVSLSGTSLPSPSSTSMDNTTGECNKDAYSEDEKKPHPRSVDCVGMGASDE PSHDTLSSSVTSLNKGLSNISIDNKPKSISACSLNSQKHEAAFRTGDVKVQKVNTKIKVPDSQR ERGFCNDFISDSPSFSGDQSTFLLDEELELEHAELSHDLYSHKRVDDEEDDFYVDDQDVNRLII VTQDGPQAFSKEEISRINEGLYYYENHAYNQRSSQAGTIDIDSKPAGGSKGNPINIVNNGIEDS GQPIPRRRHNRGNRKAQSSHKQRFFPGNFANNTNNRSHYGGVSESPPSNSIGYFYGSTPENHSY RSSRLSSSPHGIPTGSSPVGSVPKSFPPFQHPSHQLLEKNKFQQQRYNKFKNRCIAERKKLGIG CSEEMNSLYRFWSYYLRDNFNDDMYKHFKKFALDDAAANYRYGLECLFRFYSYGLEKNFQRNVY EDFEQLTLEFHHKGDLYGLEKYCDSNLDHDNFLKSLMDEHGWVPISKVADFNRLKKMTTDIQLI VEALANSSLLEVQDGNMRRRSDWSKWVSLSGTSLPSPSSTSMDNTTGECNKDAYSEDEKKPHPR SVDCVGMGASDEPSHDTLSSSVTSLNKGLSNISIDNKPKSISACSLNSQKHEAAFRTGDVKVQK VNTKIKVPDSQRERGFCNDFISDSPSFSGDQSTFLLDEELELEHAELSHDLYSHKRVDDEEDDF YVDDQDVNRLIIVTQDGPQAFSKEEISRINEGLYYYENHAYNQRSSQAGTIDIDSKPAGGSKGN PINIVNNGIEDSGQPIPRRRHNRGNRKAQSSHKQRFFPGNFANNTNNRSHYGGVSESPPSNSIG YFYGSTPENHSYRSSRLSSSPHGIPTGSSPVGSVPKSFPPFQHPSHQLLEKNKFQQQRYNKFKN RCIAERKKLGIGCSEEMNSLYRFWSYYLRDNFNDDMYKHFKKFALDDAAANYRYGLECLFRFYS YGLEKNFQRNVYEDFEQLTLEFHHKGDLYGLEKY(+) MIQITITVFFESIKITLVMEFECQLLEIFIHIALEVFLQTITIKSEETFKSISVICCRVI*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os01g0266000_circ_g.4

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