Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT4G39900_circ_g.2 |
ID in PlantcircBase | ath_circ_035778 |
Alias | 4:18509109-18509402 |
Organism | Arabidpsis thaliana |
Position | chr4: 18509109-18509402 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | find_circ; CIRI2 |
Parent gene | AT4G39900 |
Parent gene annotation |
AT4g39900/T5J17_70 |
Parent gene strand | - |
Alternative splicing | AT4G39900_circ_g.1 |
Support reads | 1/1/2 |
Tissues | leaf;flower |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT4G39900.1:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.351279051 |
Functional Information | |
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Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Philips et al., 2020 |