Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os03g0177400_circ_g.2 |
ID in PlantcircBase | osa_circ_018182 |
Alias | NA |
Organism | Oryza sativa |
Position | chr3: 4096900-4097025 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | e-circRNA |
Identification method | circseq_cup |
Parent gene | Os03g0177400 |
Parent gene annotation |
EF-1 alpha. (Os03t0177400-01);Similar to Elongation factor 1-alp ha. (Os03t0177400-02) |
Parent gene strand | + |
Alternative splicing | Os03g0177400_circ_ag.1 |
Support reads | 2 |
Tissues | root |
Exon boundary | No-No |
Splicing signals | GG-AT |
Number of exons covered | Os03t0177400-02:1 Os03t0177400-01:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 1.00779828 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2016 |